- Molecular Tool 'citb8h10-MO (Hamada's MO)' >
- Transcript 'Moocci.CG.ELv1_2.S53...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S530819.g20234.01.t
Possible name(s)
SLC6A12; SLC6A13; SLC6A6
Gene model
Location
S530819 [30,510 / 40,158]
Amino acid sequence
Length: 763
>Moocci.CG.ELv1_2.S530819.g20234.01.p
MDPKSKKASQNGKWKKNIDFGFSIAGGFVGLGNIWRFPYLCYKNGGERVLGAFLIPYIIF
VCLGSLPVFFLEVTVGQYTGFGGMLAWKIAPVMKGLGIAGNLINYYMNVYYAVILAWSLR
YFFASMANELPWSTCGNSWNTVNCIVFGSVNNSSNISNIGQNLNLSSNITVNLVVDGSVQ
LGNSTSQRVSSVLEFWQRGVLGLSPGVDKIGSLQWQLVLCLMLTWVTLYFCIWRGIGWTS
KVVYFTSTFPLVMMLVLLVRGLTLDGAIDGIVFYLKPDFNKMKDVEVWLDASTQVFYSYA
LCKGMLVTLGSYNKYHYNSYRDCIILSILNSGNVNVTDVAASGPGLAFIAYPKALTLMPF
PQFWGCLFFLMLFMLGMDSEFVGQETLMSAVTDLMPGLFKKPWRREIILAMLCFSQFLIG
LIMVSEFVGQESLMTAITDLQPHFFKKTHRRKTVLAVLCLSQFLVGLLLVTEGGVYYLNM
FDTYACAGWCLLFMAFSQLIAVSWIFGIEKFWNITCEMIGFRPIPWFKWCWFVLSPIASL
FVFSLANYKPLQYNKIYDYPPWSIALAWLLALSSMIWVPGVAIYKFVTAKGNTFYEVTVG
QYTSLGGMLAWKITPIMSGLGIAGNLINYYLNVYYAVILAWSLRYFFASMAKDLPWSTCG
NSWNSEFCYVFGKENTMNSSYTSLKQVFIVGPGNRTVLNSTKTLRVSSVLEYWQRGVLGL
SKGVDEIGYLRWELALCLLLTWIILYFCIWKGIGWTSKRPSHY
Nucleotide sequence
Length: 2,292
>Moocci.CG.ELv1_2.S530819.g20234.01.t
ATGGATCCCAAAAGTAAAAAGGCAAGCCAAAATGGAAAGTGGAAGAAAAACATCGATTTT
GGATTCTCCATAGCTGGAGGATTTGTTGGACTTGGAAATATTTGGAGATTTCCGTATCTT
TGTTATAAAAATGGAGGAGAGCGTGTTTTAGGTGCGTTTTTAATTCCGTACATAATTTTC
GTCTGTCTTGGTTCTCTTCCTGTGTTTTTCCTGGAGGTTACAGTGGGGCAATATACAGGA
TTTGGTGGAATGCTGGCCTGGAAGATAGCTCCTGTAATGAAAGGCCTTGGAATTGCTGGC
AACCTTATCAACTACTACATGAATGTTTATTACGCTGTCATACTTGCTTGGTCGTTGCGA
TATTTTTTCGCTTCGATGGCAAACGAACTTCCGTGGTCTACTTGCGGAAACTCGTGGAAT
ACAGTAAATTGTATTGTTTTTGGATCTGTAAACAATTCGTCCAATATCTCTAACATTGGA
CAAAATTTGAATTTGTCTTCCAACATTACAGTAAACCTAGTTGTTGATGGTTCTGTACAG
TTGGGTAACTCAACATCGCAGAGAGTATCATCCGTTCTGGAGTTCTGGCAGCGCGGAGTT
CTGGGTCTATCGCCAGGTGTTGATAAGATCGGTAGTTTACAATGGCAACTTGTCCTATGC
CTCATGCTTACTTGGGTCACCCTTTATTTTTGTATTTGGCGAGGAATAGGATGGACAAGC
AAAGTAGTTTACTTCACTTCAACTTTTCCTCTTGTAATGATGTTAGTTCTGTTGGTTAGG
GGATTGACACTAGATGGTGCAATTGACGGGATTGTATTTTATCTTAAACCTGATTTTAAT
AAAATGAAAGATGTAGAGGTATGGCTAGACGCATCAACACAAGTATTTTATTCTTATGCC
CTGTGCAAAGGGATGTTGGTAACATTAGGAAGTTATAATAAGTATCATTATAACAGCTAC
AGAGACTGCATTATTCTTTCCATTCTCAACAGTGGAAACGTAAACGTAACAGATGTAGCA
GCCTCGGGACCTGGATTAGCATTCATCGCTTACCCGAAAGCTTTAACGTTGATGCCATTT
CCTCAATTTTGGGGGTGTTTGTTTTTTCTTATGTTATTCATGCTTGGAATGGATAGTGAG
TTTGTAGGACAAGAAACACTGATGAGTGCTGTTACAGACTTGATGCCTGGACTGTTTAAA
AAGCCATGGCGAAGAGAAATAATTCTGGCTATGTTGTGTTTCTCCCAATTTTTAATTGGA
TTGATTATGGTTTCTGAGTTTGTTGGCCAAGAATCTTTAATGACAGCGATAACGGACCTA
CAGCCACATTTTTTCAAAAAAACCCATAGAAGGAAGACGGTTCTTGCTGTGCTCTGTCTT
TCACAATTTCTCGTCGGATTACTTTTGGTTACAGAGGGTGGCGTATATTACCTAAACATG
TTTGACACGTACGCCTGCGCTGGATGGTGTTTGCTGTTTATGGCTTTTAGTCAACTGATT
GCGGTCTCCTGGATATTCGGTATTGAAAAATTTTGGAACATCACTTGCGAAATGATCGGG
TTCCGACCTATTCCGTGGTTTAAATGGTGTTGGTTTGTGTTGTCGCCTATAGCCAGTTTG
TTTGTGTTCAGTTTGGCAAACTATAAACCACTACAATACAACAAGATTTATGATTACCCT
CCATGGAGCATTGCTTTGGCTTGGCTGTTAGCTTTGTCGTCCATGATCTGGGTTCCCGGA
GTTGCCATTTATAAATTTGTAACCGCAAAGGGAAATACTTTTTATGAAGTCACAGTCGGC
CAATATACAAGCCTTGGTGGAATGTTAGCATGGAAAATTACGCCTATTATGAGTGGGTTG
GGAATAGCTGGAAATTTAATAAACTATTACTTGAATGTTTACTACGCCGTGATTCTTGCA
TGGTCCCTCCGATATTTCTTTGCTTCGATGGCAAAAGATCTTCCTTGGTCTACTTGCGGG
AACTCGTGGAACTCTGAATTCTGTTACGTATTTGGCAAAGAAAATACAATGAATTCATCC
TACACATCATTAAAACAAGTTTTCATTGTTGGACCTGGAAATCGGACTGTTTTAAACAGT
ACCAAAACTTTACGTGTATCGTCAGTCTTGGAATATTGGCAACGGGGAGTATTAGGTTTA
TCAAAGGGTGTTGATGAAATTGGGTATTTGCGTTGGGAACTGGCACTTTGTCTGTTATTG
ACATGGATAATTTTGTACTTCTGCATATGGAAAGGAATCGGATGGACAAGCAAGCGACCT
TCCCATTACTGA
| PANTHER |
Na/ntran_symport (IPR000175) - T[4-332] 1.4E-281 - T[333-426] 1.4E-281 - T[425-592] 1.4E-281 - T[594-758] 1.4E-281 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[10-591] 83.249 - T[594-763] 18.366 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[12-144] 8.63E-119 - T[190-423] 8.63E-119 - T[425-586] 6.15E-27 - T[594-668] 5.62E-35 - T[707-758] 5.62E-35 |
| Pfam |
Na/ntran_symport (IPR000175) - T[12-426] 7.9E-134 - T[594-758] 3.6E-42 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[19-40] 1.1E-36 - T[95-121] 1.1E-36 - T[242-259] 1.1E-36 - T[488-508] 1.1E-36 - T[528-548] 1.1E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A12_HUMAN | 43.208 % | 495 | 4.5E-167 |
| S6A13_HUMAN | 42.439 % | 506 | 1.49E-171 |
| SC6A6_HUMAN | 46.003 % | 496 | 2.79E-167 |