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  1. Transcript 'KH2012:KH.C4.182.v1....'
  2. Transcript 'KH2012:KH.L9.23.v1.A...'
  3. Transcript 'KH2012:KH.C9.371.v2....'
  4. Molecular Tool 'Dlxb>Noggin'
  5. Transcript 'Moocci.CG.ELv1_2.S53...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S530819.g20234.01.t

Possible name(s)

SLC6A12; SLC6A13; SLC6A6

Location

S530819 [30,510 / 40,158]

Sequences

Amino acid sequence

Length: 763

>Moocci.CG.ELv1_2.S530819.g20234.01.p
MDPKSKKASQNGKWKKNIDFGFSIAGGFVGLGNIWRFPYLCYKNGGERVLGAFLIPYIIF
VCLGSLPVFFLEVTVGQYTGFGGMLAWKIAPVMKGLGIAGNLINYYMNVYYAVILAWSLR
YFFASMANELPWSTCGNSWNTVNCIVFGSVNNSSNISNIGQNLNLSSNITVNLVVDGSVQ
LGNSTSQRVSSVLEFWQRGVLGLSPGVDKIGSLQWQLVLCLMLTWVTLYFCIWRGIGWTS
KVVYFTSTFPLVMMLVLLVRGLTLDGAIDGIVFYLKPDFNKMKDVEVWLDASTQVFYSYA
LCKGMLVTLGSYNKYHYNSYRDCIILSILNSGNVNVTDVAASGPGLAFIAYPKALTLMPF
PQFWGCLFFLMLFMLGMDSEFVGQETLMSAVTDLMPGLFKKPWRREIILAMLCFSQFLIG
LIMVSEFVGQESLMTAITDLQPHFFKKTHRRKTVLAVLCLSQFLVGLLLVTEGGVYYLNM
FDTYACAGWCLLFMAFSQLIAVSWIFGIEKFWNITCEMIGFRPIPWFKWCWFVLSPIASL
FVFSLANYKPLQYNKIYDYPPWSIALAWLLALSSMIWVPGVAIYKFVTAKGNTFYEVTVG
QYTSLGGMLAWKITPIMSGLGIAGNLINYYLNVYYAVILAWSLRYFFASMAKDLPWSTCG
NSWNSEFCYVFGKENTMNSSYTSLKQVFIVGPGNRTVLNSTKTLRVSSVLEYWQRGVLGL
SKGVDEIGYLRWELALCLLLTWIILYFCIWKGIGWTSKRPSHY

Nucleotide sequence

Length: 2,292

>Moocci.CG.ELv1_2.S530819.g20234.01.t
ATGGATCCCAAAAGTAAAAAGGCAAGCCAAAATGGAAAGTGGAAGAAAAACATCGATTTT
GGATTCTCCATAGCTGGAGGATTTGTTGGACTTGGAAATATTTGGAGATTTCCGTATCTT
TGTTATAAAAATGGAGGAGAGCGTGTTTTAGGTGCGTTTTTAATTCCGTACATAATTTTC
GTCTGTCTTGGTTCTCTTCCTGTGTTTTTCCTGGAGGTTACAGTGGGGCAATATACAGGA
TTTGGTGGAATGCTGGCCTGGAAGATAGCTCCTGTAATGAAAGGCCTTGGAATTGCTGGC
AACCTTATCAACTACTACATGAATGTTTATTACGCTGTCATACTTGCTTGGTCGTTGCGA
TATTTTTTCGCTTCGATGGCAAACGAACTTCCGTGGTCTACTTGCGGAAACTCGTGGAAT
ACAGTAAATTGTATTGTTTTTGGATCTGTAAACAATTCGTCCAATATCTCTAACATTGGA
CAAAATTTGAATTTGTCTTCCAACATTACAGTAAACCTAGTTGTTGATGGTTCTGTACAG
TTGGGTAACTCAACATCGCAGAGAGTATCATCCGTTCTGGAGTTCTGGCAGCGCGGAGTT
CTGGGTCTATCGCCAGGTGTTGATAAGATCGGTAGTTTACAATGGCAACTTGTCCTATGC
CTCATGCTTACTTGGGTCACCCTTTATTTTTGTATTTGGCGAGGAATAGGATGGACAAGC
AAAGTAGTTTACTTCACTTCAACTTTTCCTCTTGTAATGATGTTAGTTCTGTTGGTTAGG
GGATTGACACTAGATGGTGCAATTGACGGGATTGTATTTTATCTTAAACCTGATTTTAAT
AAAATGAAAGATGTAGAGGTATGGCTAGACGCATCAACACAAGTATTTTATTCTTATGCC
CTGTGCAAAGGGATGTTGGTAACATTAGGAAGTTATAATAAGTATCATTATAACAGCTAC
AGAGACTGCATTATTCTTTCCATTCTCAACAGTGGAAACGTAAACGTAACAGATGTAGCA
GCCTCGGGACCTGGATTAGCATTCATCGCTTACCCGAAAGCTTTAACGTTGATGCCATTT
CCTCAATTTTGGGGGTGTTTGTTTTTTCTTATGTTATTCATGCTTGGAATGGATAGTGAG
TTTGTAGGACAAGAAACACTGATGAGTGCTGTTACAGACTTGATGCCTGGACTGTTTAAA
AAGCCATGGCGAAGAGAAATAATTCTGGCTATGTTGTGTTTCTCCCAATTTTTAATTGGA
TTGATTATGGTTTCTGAGTTTGTTGGCCAAGAATCTTTAATGACAGCGATAACGGACCTA
CAGCCACATTTTTTCAAAAAAACCCATAGAAGGAAGACGGTTCTTGCTGTGCTCTGTCTT
TCACAATTTCTCGTCGGATTACTTTTGGTTACAGAGGGTGGCGTATATTACCTAAACATG
TTTGACACGTACGCCTGCGCTGGATGGTGTTTGCTGTTTATGGCTTTTAGTCAACTGATT
GCGGTCTCCTGGATATTCGGTATTGAAAAATTTTGGAACATCACTTGCGAAATGATCGGG
TTCCGACCTATTCCGTGGTTTAAATGGTGTTGGTTTGTGTTGTCGCCTATAGCCAGTTTG
TTTGTGTTCAGTTTGGCAAACTATAAACCACTACAATACAACAAGATTTATGATTACCCT
CCATGGAGCATTGCTTTGGCTTGGCTGTTAGCTTTGTCGTCCATGATCTGGGTTCCCGGA
GTTGCCATTTATAAATTTGTAACCGCAAAGGGAAATACTTTTTATGAAGTCACAGTCGGC
CAATATACAAGCCTTGGTGGAATGTTAGCATGGAAAATTACGCCTATTATGAGTGGGTTG
GGAATAGCTGGAAATTTAATAAACTATTACTTGAATGTTTACTACGCCGTGATTCTTGCA
TGGTCCCTCCGATATTTCTTTGCTTCGATGGCAAAAGATCTTCCTTGGTCTACTTGCGGG
AACTCGTGGAACTCTGAATTCTGTTACGTATTTGGCAAAGAAAATACAATGAATTCATCC
TACACATCATTAAAACAAGTTTTCATTGTTGGACCTGGAAATCGGACTGTTTTAAACAGT
ACCAAAACTTTACGTGTATCGTCAGTCTTGGAATATTGGCAACGGGGAGTATTAGGTTTA
TCAAAGGGTGTTGATGAAATTGGGTATTTGCGTTGGGAACTGGCACTTTGTCTGTTATTG
ACATGGATAATTTTGTACTTCTGCATATGGAAAGGAATCGGATGGACAAGCAAGCGACCT
TCCCATTACTGA

InterProScan

PANTHER
Na/ntran_symport (IPR000175) - T[4-332] 1.4E-281 - T[333-426] 1.4E-281 - T[425-592] 1.4E-281 - T[594-758] 1.4E-281
ProSiteProfiles
Na/ntran_symport (IPR000175) - T[10-591] 83.249 - T[594-763] 18.366
SUPERFAMILY
SNS_sf (IPR037272) - T[12-144] 8.63E-119 - T[190-423] 8.63E-119 - T[425-586] 6.15E-27 - T[594-668] 5.62E-35 - T[707-758] 5.62E-35
Pfam
Na/ntran_symport (IPR000175) - T[12-426] 7.9E-134 - T[594-758] 3.6E-42
PRINTS
Na/ntran_symport (IPR000175) - T[19-40] 1.1E-36 - T[95-121] 1.1E-36 - T[242-259] 1.1E-36 - T[488-508] 1.1E-36 - T[528-548] 1.1E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
S6A12_HUMAN 43.208 % 495 4.5E-167
S6A13_HUMAN 42.439 % 506 1.49E-171
SC6A6_HUMAN 46.003 % 496 2.79E-167