- Transcript 'Moocul.CG.ELv1_2.S87...' >
- Transcript 'Moocci.CG.ELv1_2.S23...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C12.419.v2...' >
- Transcript 'Moocci.CG.ELv1_2.S53...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S530030.g20201.01.t
Possible name(s)
LHCGR; RXFP1; RXFP2
Gene model
Location
S530030 [22,110 / 27,748]
Amino acid sequence
Length: 637
>Moocci.CG.ELv1_2.S530030.g20201.01.p
MFPEDECSPVCNNTCGWEGGRRGAGVPVGFYLCTTNITADNIYETKKEGPNGTIVEHYIP
SYNLCDGILSCNIGMGDEKDCPDRFPCKSKNLISIPMEEVCNGIINCDAGEDEEMSLCED
ERFYCSANSGKLISIDKHLVCDSNIICDENEDEVNCEDGRFYCEDGNPLFVKKNKILDDI
ADCSDWSDECPTMNQFEVDDGPFSSRYELIASPILRTLVWIMGILAVTGNTTVIIREVML
WKRKRSTGHTTRAMIANQMLIINLAVADCIMGVYLLILGIVGLIYKGHYCAKDQVWRSSV
GCTTLGVLSLLSSEASVMSMVFLTACRLYSSLRPYNTTIFPRRIHVYTMMTSCWVIAVVL
AIIPLIPQLNHIFIGSALFSQNPFAKRKIMDLTNATQLLFKLVVLTSKSKTERMEVINIE
KSWESLQSTAKIHLEQPEYLSVSSYFGYYSTHGVCISKFFVTVDDPSWKFSFFINLLNFC
AFAFVATCYTIIYFSSSKVAHSDVNKDSGNVLKGMQRKILRLVITDLCCWLPISVMAFVK
LAGGEVSDNAYAFAAIILLPINSALNPFLYSNLPEYIREKLSKTVRYLPHRRKSWNVSQS
SHRSSQTTYLTKCVPTAAVIYNMSVYCKVVNVAHNNT
Nucleotide sequence
Length: 1,914
>Moocci.CG.ELv1_2.S530030.g20201.01.t
ATGTTTCCTGAGGATGAATGCAGTCCGGTTTGCAACAACACATGCGGATGGGAGGGTGGT
CGGAGAGGTGCCGGTGTCCCCGTGGGCTTTTATCTGTGCACTACGAATATCACAGCAGAT
AACATTTACGAAACAAAGAAGGAAGGTCCGAACGGTACAATAGTTGAACATTATATTCCA
AGCTATAACTTATGTGATGGAATATTATCGTGTAATATTGGGATGGGAGATGAGAAAGAT
TGTCCAGATAGATTTCCATGCAAGAGTAAAAATCTCATCAGCATCCCGATGGAAGAAGTT
TGTAATGGGATCATCAACTGTGATGCTGGAGAAGACGAAGAGATGAGTCTTTGTGAAGAT
GAAAGATTCTACTGTTCTGCAAACAGCGGGAAGTTGATAAGCATTGACAAACATCTTGTG
TGCGATTCCAATATTATTTGTGACGAAAATGAAGATGAGGTGAATTGTGAAGACGGAAGG
TTTTATTGTGAAGACGGAAATCCATTGTTTGTGAAGAAAAACAAGATTTTGGACGACATT
GCTGATTGTTCTGATTGGAGTGATGAATGTCCTACAATGAATCAGTTTGAAGTTGATGAT
GGACCTTTCTCTTCGCGGTATGAATTGATTGCGAGCCCTATCTTGCGAACATTGGTTTGG
ATTATGGGGATACTAGCAGTTACTGGAAACACTACCGTTATAATCAGAGAAGTGATGTTG
TGGAAGCGAAAACGATCAACTGGTCACACAACTCGAGCAATGATTGCTAACCAAATGTTA
ATTATAAATCTGGCAGTTGCAGATTGTATCATGGGAGTGTACTTGCTTATTCTAGGCATT
GTGGGGTTAATATACAAGGGACATTACTGTGCCAAAGATCAAGTCTGGAGATCGAGTGTT
GGATGTACTACACTTGGTGTGTTATCTTTGCTTTCCAGTGAAGCATCTGTGATGTCAATG
GTATTTTTAACAGCTTGCAGACTTTACAGCTCACTAAGACCATATAACACCACAATCTTT
CCACGACGAATCCATGTGTATACTATGATGACGTCATGTTGGGTTATAGCTGTGGTATTG
GCCATCATTCCTTTAATTCCTCAACTGAATCATATATTCATTGGGTCAGCACTGTTTAGT
CAAAACCCATTTGCAAAAAGGAAAATTATGGACTTAACAAATGCTACACAATTACTTTTC
AAGTTGGTTGTCTTAACAAGTAAATCTAAAACGGAACGAATGGAAGTTATAAACATAGAA
AAATCATGGGAAAGCTTACAGTCAACTGCAAAGATTCATCTTGAACAACCAGAATATTTG
TCCGTTTCTTCATACTTTGGTTACTACAGTACACACGGAGTTTGTATTTCAAAGTTCTTT
GTCACCGTGGATGATCCAAGTTGGAAGTTTTCATTCTTCATCAACCTTCTTAACTTTTGT
GCGTTTGCGTTCGTTGCCACTTGCTATACCATCATTTATTTTTCATCTTCAAAAGTAGCA
CATTCTGACGTTAATAAAGATAGCGGCAATGTGCTTAAGGGAATGCAACGAAAAATTCTT
CGATTGGTCATCACCGATTTATGCTGCTGGCTTCCAATATCAGTGATGGCTTTTGTCAAA
CTTGCAGGAGGAGAGGTTTCTGACAACGCTTATGCATTCGCAGCCATTATTTTACTTCCT
ATTAATAGCGCGCTCAACCCATTTTTGTATTCCAATCTTCCAGAATACATCCGCGAAAAA
CTTTCGAAAACGGTTCGTTATTTACCCCATCGCAGAAAAAGCTGGAACGTGTCGCAATCT
TCACACAGATCCTCCCAAACAACTTATTTAACCAAGTGTGTACCAACTGCTGCGGTTATT
TACAACATGTCGGTCTACTGTAAGGTGGTGAATGTAGCACATAACAACACATAG
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[80-120] 0.022 - T[155-192] 0.24 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[100-605] 1.8E-91 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[214-238] 1.0E-13 - T[257-278] 1.0E-13 - T[345-366] 1.0E-13 - T[515-539] 1.0E-13 - T[552-578] 1.0E-13 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[229-570] 18.686 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[256-366] 4.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RXFP2_HUMAN | 31.361 % | 85.5 | 2.76E-17 |
| RXFP1_HUMAN | 32.53 % | 84 | 9.66E-17 |