- Clone 'cien202507' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Moocci.CG.ELv1_2.S51...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S513599.g19419.01.t
Possible name(s)
DDX10; DDX18; DDX31
Gene model
Location
S513599 [17,446 / 20,387]
Amino acid sequence
Length: 710
>Moocci.CG.ELv1_2.S513599.g19419.01.p
MSENFTLNLVTTHNETTVSKKKSHGKFYGRNSYRARKRAWNKNKVLEVFSADQTPLKKNL
EKNVPVKIYKSDHKKFKMKNLNLKEEIPMSSDSVGGGDVKFGNKIQPFFNKPNEKTAVKR
SSLFNNNPDIPDVKQPKIAKVSEDVFSHTKFEDLNLHKNLIQYITNKLDHSEMTNIQQKT
IPSLLKGSDALVKSQTGSGKTLAYAVPVIQTLQDIKPEVSRTDGPLALVLVPTRELASQT
YEIFQRLTQPFRRLVATWIMGGEKRKSEKSRIRKGVNIVVGTPGRILDHITSTECFSLKN
IRWLICDEADRLLDMGFEEQIKNILQSLTEQKEDQHWQTILLSATLPQNVEKLAKVALTD
PVRIQIQDDSAESDESFAVPTNLIQHVAIVPSKLRLIALIKFLKFRLAKHNDKIVVFLSC
RDSVSFHYEVLKYLSTENLISVDINTQFLFKLHGGMLQENRQKVFKEFTSAKCGVLLCTD
VAARGLHLPHINWVVQYTSPGSPINYIHRIGRTARAGKQGAALLMLSPSESQYVNLLTQY
NIEISKMSLDCILSEGNENTSGNEKQMEQEAAIQLQNKIEDYVAENSDIALQARVAYGSF
IRAYASYPSSLKTLFHVKHLHLGHVAKSFALNEAPSDIIQSLQKSVKHLQMNNKGKNNKK
KQTAKEVIDSLQRSYEVNALQKEKELEKKSPVKKNFAKRFNLMSEFGSGI
Nucleotide sequence
Length: 2,133
>Moocci.CG.ELv1_2.S513599.g19419.01.t
ATGAGTGAAAACTTTACTCTTAACTTGGTAACTACACACAATGAAACTACTGTATCAAAG
AAAAAATCTCATGGGAAATTTTACGGAAGAAACAGCTATCGAGCAAGAAAAAGGGCTTGG
AATAAAAATAAAGTCTTAGAAGTATTTTCAGCTGATCAAACACCTCTCAAAAAAAATCTG
GAGAAAAACGTACCAGTTAAAATTTATAAAAGCGACCATAAAAAGTTTAAAATGAAAAAT
TTAAATTTAAAAGAAGAAATACCTATGAGTAGTGATAGCGTAGGAGGTGGTGATGTTAAA
TTTGGTAATAAAATTCAGCCATTTTTTAATAAACCTAATGAAAAAACTGCTGTTAAACGT
TCATCATTGTTTAATAATAACCCAGATATTCCTGATGTAAAGCAGCCTAAAATTGCTAAA
GTTAGTGAAGATGTTTTTTCACATACAAAATTTGAAGATCTTAATTTGCATAAAAATTTA
ATACAATACATCACAAATAAATTGGATCATTCAGAAATGACAAACATTCAACAAAAAACA
ATCCCATCATTACTAAAAGGATCAGATGCTCTTGTTAAATCTCAGACAGGCTCTGGTAAA
ACGCTGGCATATGCTGTTCCCGTGATTCAGACACTTCAGGATATTAAGCCTGAAGTTTCA
AGAACTGATGGACCTTTGGCTCTTGTTCTTGTACCAACAAGGGAATTGGCATCGCAGACT
TATGAAATCTTTCAACGACTTACTCAACCGTTTCGTAGGCTTGTTGCTACTTGGATTATG
GGAGGAGAAAAAAGAAAGTCTGAAAAATCACGAATTCGAAAAGGTGTAAATATTGTTGTT
GGAACCCCAGGACGTATTTTAGACCATATCACATCCACTGAATGTTTTTCTCTAAAAAAT
ATTCGTTGGTTAATTTGCGATGAGGCAGACAGATTACTTGATATGGGATTTGAAGAACAG
ATAAAAAATATTTTGCAATCTTTAACTGAACAAAAAGAGGATCAACATTGGCAGACCATA
TTGTTATCAGCAACATTACCACAAAATGTTGAGAAATTAGCCAAAGTCGCGCTAACTGAC
CCAGTTCGTATACAAATTCAAGATGATTCAGCCGAATCTGATGAGAGCTTTGCAGTACCA
ACAAATTTAATTCAGCATGTGGCAATTGTTCCAAGCAAACTTCGATTAATTGCACTCATA
AAATTTTTAAAGTTTCGTTTAGCAAAGCACAATGACAAAATTGTTGTGTTTTTATCATGT
CGTGATTCAGTTTCTTTTCATTATGAAGTTTTGAAATACTTATCTACTGAAAATTTAATC
AGTGTCGACATTAATACACAGTTTTTGTTCAAATTACATGGAGGTATGCTTCAAGAAAAC
AGGCAAAAAGTTTTTAAAGAATTTACATCAGCGAAATGTGGAGTTTTACTGTGTACTGAC
GTAGCTGCTAGGGGGCTCCATCTACCTCATATTAATTGGGTCGTACAGTACACCTCTCCT
GGTAGTCCAATCAACTACATCCACAGAATAGGCAGAACAGCAAGAGCTGGGAAACAAGGG
GCTGCATTACTGATGTTATCACCTTCTGAATCACAGTATGTAAACCTTCTCACTCAGTAC
AACATAGAAATATCAAAAATGTCACTTGATTGTATACTGTCTGAAGGTAATGAAAACACG
AGCGGCAATGAAAAACAAATGGAGCAAGAAGCTGCTATTCAATTGCAAAATAAAATTGAA
GACTATGTGGCTGAAAATAGTGACATTGCTTTACAAGCAAGGGTTGCTTATGGTTCTTTT
ATACGGGCATATGCATCATATCCATCAAGTTTAAAAACGCTTTTTCATGTTAAGCACCTT
CATTTGGGACATGTGGCTAAAAGTTTTGCGTTAAACGAAGCCCCCAGTGACATCATTCAA
TCCCTCCAAAAATCTGTTAAGCATCTACAAATGAACAATAAAGGAAAGAATAATAAGAAA
AAGCAAACAGCAAAAGAGGTTATAGACTCTTTGCAGCGCTCATATGAAGTCAATGCATTG
CAAAAAGAAAAAGAGTTGGAAAAGAAATCACCTGTAAAGAAAAACTTTGCAAAGCGATTT
AATTTAATGTCTGAGTTTGGTAGCGGGATATGA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[149-178] 8.082 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[169-386] 3.9E-52 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[174-353] 4.7E-52 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[181-364] 33.603 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[223-535] 1.03E-63 |
| CDD |
Helicase_C (IPR001650) - T[384-525] 4.12572E-32 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[395-560] 20.03 |
| Pfam |
Helicase_C (IPR001650) - T[399-517] 5.8E-23 |
| SMART |
Helicase_C (IPR001650) - T[438-517] 1.1E-24 |
| SMART |
DUF4217 (IPR025313) - T[574-639] 4.5E-22 |
| Pfam |
DUF4217 (IPR025313) - T[576-636] 4.5E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 33.4 % | 255 | 7.58E-74 |
| DDX18_HUMAN | 36.468 % | 300 | 7.11E-92 |
| DDX31_HUMAN | 45.652 % | 515 | 1.44E-172 |