- Clone 'cinc033n12' >
- EST 'FF873706.1' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Moocci.CG.ELv1_2.S49...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S493727.g18411.01.t
Possible name(s)
BBS4; TMTC1; TTC8
Gene model
Location
S493727 [1,590 / 3,285]
Amino acid sequence
Length: 564
>Moocci.CG.ELv1_2.S493727.g18411.01.p
MESKESNEETSSIEVEKPKTVIKTKRVIDLPVIERRNWLIHQHYIRNEFETCKNIIEEQL
QETQGECEFALYVNAMILRYEGEINRSLELLQMCINLSPTNALIMKQIARNLFLLGKYKN
AIECYNRSASMGGKDWEISHNMGVIHMQLKQYKQAEQSFNDALVLNKHDVTFITLSKLYI
EINETEKAMTVLKNGVTFSPENIDMLTTLGLIYLKQQKFHNAFEYLGQALTFDPEHFSAI
LAAGSLMQSHGDYDVALAKYRVAAHKAPESASLWNNIAMCFFGKAKYVAAIACLKRAAYL
APFDWKIQYNLSLVHLTMQQPASAFKFASSALTLNPQSANLYVLLGVALNGLGEEENARK
SYEEAIKLMPKNPHALINLAIHLNRNENTRSQAKEYILQLVKVLKDENNKEIYEIAKKLG
LSLHMNEVFVSKQPDKEQKKKTKSTRSREPTKSVTEIPVPAPVPTKSNKSDRKSKSNKHT
PRKESITNIVSGASEVLSKGLSQNYIGPQSAQVMSSQNLASLKAPAVLSPLKGRDALKQL
PSVPTHELTSAPAEQKSNKTAVLS
Nucleotide sequence
Length: 1,695
>Moocci.CG.ELv1_2.S493727.g18411.01.t
ATGGAAAGCAAGGAATCTAATGAAGAAACTTCCTCTATAGAAGTGGAAAAGCCAAAAACA
GTAATTAAAACAAAACGTGTAATTGACTTGCCTGTGATTGAGCGAAGAAATTGGTTAATC
CATCAACATTACATTCGTAACGAATTTGAAACTTGTAAAAATATTATTGAAGAACAACTA
CAGGAAACACAGGGAGAATGTGAGTTTGCTTTATATGTGAATGCTATGATTTTAAGATAT
GAAGGAGAAATTAACAGATCTTTGGAACTTTTACAAATGTGTATAAATTTAAGTCCAACG
AATGCTTTAATCATGAAACAAATAGCTCGCAATTTGTTTTTACTTGGAAAATATAAAAAT
GCAATTGAATGTTACAACAGATCCGCAAGTATGGGAGGTAAAGATTGGGAAATTTCTCAT
AACATGGGTGTAATTCACATGCAATTAAAGCAATATAAACAAGCTGAACAAAGCTTCAAT
GATGCTTTAGTTTTAAATAAGCATGATGTAACTTTTATAACTTTGTCCAAGTTATACATA
GAAATAAATGAGACAGAAAAAGCAATGACGGTGTTAAAAAATGGAGTGACATTTTCACCT
GAAAACATTGATATGCTTACTACACTGGGGTTAATCTATTTAAAGCAACAGAAGTTTCAT
AATGCATTTGAATACTTAGGGCAAGCATTAACTTTTGACCCTGAACACTTTTCAGCAATC
TTAGCAGCTGGATCATTAATGCAATCTCATGGAGATTATGATGTTGCATTGGCTAAGTAT
AGAGTTGCAGCTCACAAAGCACCGGAAAGTGCCTCATTATGGAATAATATTGCCATGTGC
TTCTTTGGAAAAGCTAAATATGTTGCTGCAATAGCTTGCTTAAAACGAGCAGCATATTTG
GCACCTTTTGATTGGAAAATACAATATAACCTCTCACTTGTTCATCTTACAATGCAACAA
CCTGCTAGTGCTTTTAAATTTGCTAGTTCAGCTTTAACTTTAAACCCACAAAGTGCAAAC
TTATATGTATTACTTGGTGTTGCATTAAATGGATTAGGCGAAGAAGAAAATGCAAGGAAA
TCTTATGAAGAGGCTATTAAATTGATGCCTAAAAATCCACATGCATTGATAAACTTAGCC
ATCCATTTAAATCGAAATGAAAACACCAGATCTCAAGCAAAAGAATATATTTTACAGCTT
GTTAAAGTTCTTAAAGATGAAAACAACAAAGAAATTTATGAAATTGCCAAAAAATTGGGA
CTCTCTCTACATATGAATGAAGTTTTTGTTTCTAAGCAACCAGACAAAGAACAAAAAAAG
AAAACCAAGTCCACACGATCAAGAGAACCTACTAAGTCAGTTACTGAAATACCGGTACCA
GCTCCAGTTCCCACTAAAAGTAACAAGTCTGATAGAAAATCTAAAAGTAATAAACATACT
CCTAGGAAAGAATCTATTACAAATATTGTAAGCGGTGCAAGTGAAGTTCTAAGCAAAGGT
TTATCTCAGAATTACATAGGACCACAATCTGCCCAAGTAATGTCTTCACAAAATTTAGCG
TCATTAAAAGCCCCAGCAGTTTTGTCACCACTTAAAGGCAGAGATGCCTTGAAACAACTT
CCCTCAGTACCAACACATGAACTTACTTCTGCCCCTGCAGAACAGAAATCTAATAAAACA
GCTGTTTTATCATAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[43-171] 4.1E-19 - T[172-243] 8.9E-10 - T[244-433] 1.0E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[63-171] 1.71E-17 - T[171-398] 1.42E-32 |
| SMART |
TPR_repeat (IPR019734) - T[68-101] 31.0 - T[102-135] 2.6 - T[136-169] 0.0011 - T[203-236] 9.2E-4 - T[271-304] 0.011 - T[305-338] 12.0 - T[339-372] 0.002 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[68-407] 52.984 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[68-101] 6.52 - T[102-135] 6.638 - T[136-169] 8.998 - T[170-202] 5.605 - T[203-236] 11.181 - T[237-270] 7.051 - T[271-304] 7.493 - T[305-338] 6.697 - T[339-372] 10.915 |
| Pfam |
TPR_repeat (IPR019734) - T[140-166] 0.0084 - T[204-236] 4.4E-4 - T[339-372] 1.0E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTC8_HUMAN | 27.642 % | 82.8 | 1.29E-16 |
| BBS4_HUMAN | 53.139 % | 454 | 3.13E-155 |