- Transcript 'KH2012:KH.C3.316.v3....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocci.CG.ELv1_2.S47...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S479065.g16818.01.t
Possible name(s)
TBX3; TBX4; TBX5
Gene model
Location
S479065 [24,840 / 30,920]
Amino acid sequence
Length: 656
>Moocci.CG.ELv1_2.S479065.g16818.01.p
MGFDNCNMLMMYNRIEICLKLYNNPPQNIIVYTKQRMFPSFKVKVSGLNKSAKYIMLMDI
VAADDCRYKFHNSRWMVAGKADPELPKRMYIHPDSPATGEQWMNRPGVSFHKLKLTNNIA
DPHGHTILNSMHKYQPRFHVVRCGDLAKLPYCAFRTYVFNEMQFIAVTAYQNEKITQLKI
DHNPFAKGFRDSGSGKREKRAHYHLQQQMLSNSQKRNEASASTTRSASPENEKIRRITEE
RDVSISSPERRRSVESNSKADSVQSYRQESSFRSRGESSSQRYSPYSRNNDRGSSDSSST
SPSIKISESSTNSNLKHINPPPDENTLPHISSPSTKSPTHSNSKSSSITSPVPIHPPIPG
LGYSSAFMPHMSAAAAAAAAMQPNYNSYFHSNHLSALSAAMNGSSSGYQHPALLQAMAGC
TTSPSAARSPPFMPSSNHSAVNPALQTFLSSNSLSGLNPYANFFPYAAAAAGYPYIPGGS
SSIAAAAAVANKMEGGPGSLSLAERFYRQSAAAVALGKSLGDNSLNTGSSNPTCSAASMM
RYSPYQLPHLPFGLGPIRPQPQLAGAKMEDYGTADGKIVRPEESQKSRSDSDHTIRDRSV
SPKKESIDRRRSPHQENSLLGRQSKSPTSASSAVQELRNMERLVSGLDDKARRISD
Nucleotide sequence
Length: 2,839
>Moocci.CG.ELv1_2.S479065.g16818.01.t
ATGGGATTTGATAATTGCAACATGTTGATGATGTACAACAGGATTGAGATTTGTCTCAAA
CTTTACAATAATCCCCCGCAAAACATAATCGTATACACGAAACAGCGAATGTTCCCGTCC
TTCAAGGTGAAAGTGAGTGGATTAAACAAGTCAGCTAAATACATAATGCTGATGGACATA
GTGGCAGCTGACGACTGCAGATACAAGTTCCACAACTCGCGCTGGATGGTGGCAGGAAAA
GCTGACCCCGAGCTCCCGAAGCGAATGTACATCCATCCTGACTCCCCGGCCACGGGAGAG
CAGTGGATGAACAGACCAGGTGTCTCATTTCATAAGTTGAAACTGACCAACAACATCGCT
GATCCTCATGGACATACAATTTTAAACTCGATGCACAAGTACCAGCCAAGATTCCACGTG
GTAAGATGCGGGGATTTGGCGAAACTACCGTACTGCGCCTTCCGTACCTACGTGTTCAAC
GAGATGCAGTTTATCGCTGTCACTGCTTACCAGAACGAAAAGATCACTCAACTAAAAATC
GACCACAATCCGTTTGCTAAAGGCTTTCGTGATTCAGGAAGTGGAAAAAGGGAAAAAAGA
GCTCATTATCATCTACAACAACAAATGTTGTCAAACAGCCAGAAGAGAAATGAAGCTTCA
GCATCCACCACCAGAAGTGCTTCCCCAGAAAACGAAAAAATTCGCCGAATCACTGAAGAA
AGAGATGTATCGATATCTTCTCCGGAGCGCCGTCGTAGTGTGGAAAGCAATTCAAAAGCA
GACTCAGTACAAAGTTATCGCCAAGAAAGCAGTTTCCGATCCCGTGGAGAATCGTCATCT
CAAAGATATTCTCCATACAGCCGAAACAATGACAGAGGAAGCTCCGATTCTTCATCAACT
TCACCGAGCATAAAAATATCAGAATCGTCAACTAATTCTAACTTAAAGCATATTAACCCG
CCCCCAGATGAAAATACATTGCCGCACATCAGTTCACCGTCGACAAAAAGTCCAACGCAC
TCCAATTCAAAATCATCATCCATTACTTCACCGGTACCCATTCATCCTCCAATTCCAGGA
CTTGGGTATTCCAGCGCTTTTATGCCCCACATGTCAGCAGCTGCTGCAGCAGCCGCAGCA
ATGCAACCGAATTATAACTCATATTTTCACTCCAACCACCTGTCAGCATTATCTGCGGCA
ATGAATGGAAGTAGTTCAGGATATCAACACCCAGCATTGTTGCAGGCAATGGCCGGATGT
ACAACTTCACCCTCTGCTGCACGGTCTCCTCCTTTTATGCCTTCCAGCAATCATTCCGCC
GTCAACCCTGCCCTGCAAACATTTTTGTCATCTAACTCCTTGTCTGGATTAAACCCATAT
GCCAACTTCTTCCCCTATGCCGCAGCCGCCGCCGGATACCCGTATATACCTGGAGGGTCC
TCATCAATAGCTGCGGCAGCAGCAGTCGCAAATAAGATGGAAGGTGGGCCGGGATCCTTG
TCCTTGGCTGAACGATTTTATCGCCAGTCTGCCGCTGCAGTAGCATTGGGAAAATCACTT
GGTGATAATTCTTTGAATACAGGTTCTTCAAACCCAACCTGTAGTGCAGCTTCTATGATG
AGATACTCTCCTTATCAATTGCCACATTTGCCATTCGGATTAGGTCCCATTAGACCACAA
CCTCAGTTAGCTGGAGCTAAAATGGAAGATTATGGAACAGCAGACGGAAAAATCGTTAGA
CCAGAAGAAAGTCAAAAGTCTCGTTCAGACTCCGATCACACGATAAGAGATAGAAGTGTT
AGTCCAAAAAAGGAGTCTATTGATCGAAGAAGATCGCCACACCAAGAAAACAGTTTGTTA
GGACGACAAAGCAAAAGTCCGACATCTGCTAGTTCGGCAGTACAAGAACTTCGTAATATG
GAACGACTAGTTTCAGGACTTGATGATAAAGCTCGTAGAATTAGCGATTGATGTCAAAAT
TAGCAAACTAAATTGAGCTGTTATTATACTTTATTGCTTACAAATTCCTCTGATTAATAT
ATTAATATTATCTTATTTTATTTTACTTAATTTTTTTGCATTTTACCGCACATAAAATTA
TATACCATAAATGTGAACTCTTAAAACTATGTTGTCGCTGATACCAGGCTAATTGTGACT
ACAGGATATTTGCCGGACCAGCTCAAACCTCAGCATTAACTGTGATATCTCATTAATTTT
TTTCTTGGTTGGCCAGAACAATGCCACGTGATATGTATGTAATACCATTGTAATGTTCTT
TAGCTACTGTTGTAGTTTATGTTCCGTTTTAAAACAGTTAATACTTAATATTATTAAAAT
TTACTTTAATTACAGTTAAAATGGTTTTACAAGAAAATATAAACACAATAATTTTTTTTG
TAATTTTTTAGCAATATATTTTACAGTATAACTTCCGAGTGTTTATAATTTATTTTTTAT
TGTTCATTTTTGCAGTAAATTAGTGTCTGTCGTTAGATGTTTATCTTACAGACGCGATAA
AAATTCAGGGGAAATATATAGTACTTGACAAAATTGTACCTGTTTTTATTCAACATTTAA
AATTGCCATATATGACGGTGTTTTATACTCTTATAATGTCTTTGCGACAACCTTATTGTA
CCAAACATATTCGTCTAACACTTTCTTCATTTTAATTTTGTTACAAATATTTTTGAATAA
ACCACCCGACGTCCACACGCGCACAACATTTTCATCGAACAACATTGGAAATGCAACGTT
ATTTTTCGATATTTTTGTCATTTTATGATATTTGTGCAATGTTATTGTTATTAATAAACT
CCACTAAATATATCTAAAA
| Gene3D |
T-box_sf (IPR036960) - T[15-197] 9.2E-81 |
| SMART |
TF_T-box (IPR001699) - T[16-196] 3.3E-94 |
| PRINTS |
TF_T-box (IPR001699) - T[25-49] 1.0E-30 - T[90-103] 1.0E-30 - T[127-141] 1.0E-30 - T[162-175] 1.0E-30 - T[183-191] 1.0E-30 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[27-191] 61.965 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[29-191] 7.46E-64 |
| Pfam |
TF_T-box (IPR001699) - T[29-191] 7.7E-68 |
| CDD |
TF_T-box (IPR001699) - T[29-193] 4.09771E-102 |
| PANTHER |
TF_T-box (IPR001699) - T[31-239] 4.0E-131 - T[255-384] 4.0E-131 - T[376-651] 4.0E-131 |
| PRINTS |
TF_Brachyury (IPR002070) - T[70-90] 1.1E-5 - T[132-149] 1.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX3_HUMAN | 61.883 % | 302 | 8.64E-93 |
| TBX4_HUMAN | 57.447 % | 223 | 4.87E-65 |
| TBX5_HUMAN | 59.14 % | 225 | 7.13E-66 |