- Transcript 'Moocci.CG.ELv1_2.S47...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S478029.g16735.01.t
Possible name(s)
CPN2; LRG1; LRRC15
Gene model
Location
S478029 [14,574 / 18,390]
Amino acid sequence
Length: 469
>Moocci.CG.ELv1_2.S478029.g16735.01.p
MEHENFGASNLTNLNLSHNLIEKLLSHHLKYLTKLSLLKLHNNKITLLEAGTFKHNRYLE
TLILTGNQISSIYENTFLGLEILHTLRLDGNKISDDDVEEGAFVGLPQLKELSMSYNELK
SIPPSITKHLQSLVTLNLGNNSISGLTIVNMSNLQNLSLHNNSIRTIENGVFQSSPKLRY
VNLEANEIIDISKKAFFNLLEQLHINQNQLTFPEEDWFQHLLNNSKGENAHLLGDGNPWR
CDCELKSFYDYFNKIPENDPWKKKLEITCSSPKQDRGKPFSFFILEENCRVFPTKIDSER
TIHRTTTEMVSSVDSTYNKNCVTTISDKISFSLENQYRPPIKMFHLGLPNTERPNKELYE
ETSTSLNLVVSFFTCFLCICVVVVSCVIYCRKKRIVKKDDFNTINTNDNFPKTQSADDVY
EEINNPTIISSNPRNNREEDIYIKPVTPESDKKCAQEYYADSNTIPKDV
Nucleotide sequence
Length: 1,410
>Moocci.CG.ELv1_2.S478029.g16735.01.t
ATGGAACACGAAAACTTCGGTGCATCAAATCTGACGAATCTAAATTTGAGTCACAATTTA
ATCGAAAAGCTATTGTCTCATCATTTAAAATATTTAACAAAACTGAGTTTGTTAAAACTG
CATAACAACAAAATAACACTATTAGAAGCCGGGACGTTTAAACACAATCGGTATCTTGAA
ACATTGATATTGACAGGAAACCAAATAAGCTCAATATACGAAAACACCTTCTTGGGATTG
GAAATTCTGCACACACTTCGTTTAGATGGAAACAAAATAAGTGATGACGATGTTGAAGAA
GGCGCATTTGTAGGACTTCCCCAATTAAAGGAGTTATCGATGTCTTATAATGAACTTAAA
TCTATACCGCCATCAATTACAAAGCATTTACAAAGTCTGGTTACATTAAACTTGGGAAAC
AATTCCATTTCGGGTCTTACTATCGTCAACATGTCTAATTTACAAAACTTATCTCTTCAT
AATAATTCAATTCGAACCATTGAAAATGGCGTCTTTCAATCGTCTCCAAAACTACGTTAT
GTCAATTTGGAAGCAAATGAAATTATAGATATTTCCAAAAAAGCTTTTTTTAATCTTCTA
GAACAATTGCACATAAATCAAAATCAATTAACTTTCCCGGAAGAAGATTGGTTTCAACAT
CTATTAAACAATTCAAAAGGAGAGAATGCGCACTTACTCGGAGATGGAAACCCATGGAGA
TGTGATTGTGAATTGAAATCTTTTTATGATTACTTCAATAAAATCCCCGAAAATGATCCC
TGGAAAAAGAAACTTGAAATAACTTGTTCGTCTCCAAAGCAAGATAGAGGAAAACCATTT
TCATTTTTTATTCTAGAAGAAAACTGTCGGGTTTTCCCTACTAAAATAGATAGCGAAAGA
ACAATACATCGGACAACTACAGAAATGGTCAGCTCAGTAGACAGTACCTATAATAAAAAC
TGTGTTACTACTATAAGTGATAAAATAAGCTTTTCTTTGGAAAATCAGTATAGGCCGCCT
ATAAAAATGTTTCATCTTGGCCTTCCGAATACAGAACGTCCAAATAAAGAACTATATGAA
GAAACTTCTACATCCTTAAATTTAGTAGTTTCGTTCTTTACATGTTTTTTGTGTATTTGT
GTTGTTGTTGTATCATGTGTAATTTACTGCAGGAAAAAGAGAATTGTGAAAAAAGACGAC
TTCAATACAATCAACACCAACGACAACTTTCCAAAAACACAAAGTGCAGACGACGTTTAC
GAAGAAATTAATAATCCCACTATAATCTCTTCGAATCCACGTAATAACAGAGAAGAAGAC
ATTTACATTAAACCAGTGACTCCTGAAAGCGACAAGAAATGTGCGCAGGAATATTATGCT
GATTCAAACACAATACCAAAAGATGTATAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[4-148] 3.1E-30 - T[149-290] 2.4E-23 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[10-30] 7.396 - T[34-55] 5.841 - T[58-79] 7.566 - T[82-103] 5.209 - T[108-129] 7.219 - T[132-152] 6.18 - T[153-174] 8.135 - T[177-198] 6.164 - T[199-220] 4.593 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[32-55] 0.023 - T[59-79] 74.0 - T[80-105] 59.0 - T[106-129] 0.016 - T[130-150] 200.0 - T[151-174] 0.002 - T[197-220] 100.0 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[34-93] 1.9E-11 - T[97-143] 5.5E-9 - T[144-188] 1.9E-8 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[237-290] 0.0054 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CPN2_HUMAN | 30.182 % | 92.8 | 4.25E-20 |
| LRC15_HUMAN | 29.066 % | 94 | 1.61E-20 |
| A2GL_HUMAN | 28.058 % | 90.5 | 6.95E-20 |
