- Transcript 'KH2012:KH.S1391.2.v2...' >
- Transcript 'Moocul.CG.ELv1_2.S29...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'KH2012:KH.C4.179.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S47...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S471952.g16122.01.t
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
S471952 [13,616 / 15,950]
Amino acid sequence
Length: 777
>Moocci.CG.ELv1_2.S471952.g16122.01.p
MSDFIQTITEDANVDIAEESSDSEAEGDRVITKNERKAKKRRGREDFNSDFHIDIGLDTE
VASEAVTLDSVLKTVLKPRQTKTTLDDKIIKVRKQRLLKKSINDVKENTNDKIKADDKQE
IDESKKAVDNEQQDHDSAESDITESEEDETDLLTDKIKIKEKKGKKPTKSTDFIDEVQKS
VAMKKAETANDEDLSDSEFFKSCPDWDPNMSFKDMNLSRPLLKATSAINYVTPTPVQQAS
IPLALLAKDLCVCATTGTGKTAAFMLPILERLVHKPRTAPAVRVLCLVPTRELAVQVHVV
TRQLAQFTSIQICLAAGGLDLKSQEAALRQGPDVVIATPGRLIDHLHNTPSFQLNSVEIL
VLDEADRMLDEFFADQMQEIIKLCAAQRQTMLFSATMSEKVKDLAAVSLRNPTKVFINSN
TDVAPFLRQEFIRIRPNREGDRESIVAALCSRTFVSHVLIFTQTKKQAHRMHIVLGLLGL
KVGELHGDLNQSQRLESLQKFKGAEIDILVCTDLASRGLDIENVKTVINFTMPNSVKHYV
HRVGRTARAGKSGRSVSLVGETERKMLKQIVKQAKNPVKSRIIPPEVITKFKSKLTEIDE
DVGNVLRLETAEKQLAQSEHDVKKGQRMLQPQKGEEKVKREWFQSKFEREFARAERMLGI
HSEAYTKGKKGKVNKNKKEFFKKPANASDRANAELEKVQAYQKREAKRNKRLKRVRACAE
DPVPSKVAKTKKKKSSFEKELTDTRKKSVKNFRSNVQQKRKGALGKTKFQKGKRQKY
Nucleotide sequence
Length: 2,334
>Moocci.CG.ELv1_2.S471952.g16122.01.t
ATGAGTGACTTTATACAAACTATCACTGAGGATGCAAATGTTGACATTGCCGAGGAGAGC
AGTGATAGTGAAGCAGAGGGCGATAGAGTTATCACAAAAAACGAGCGCAAAGCTAAAAAA
CGACGCGGACGAGAAGACTTTAACTCGGACTTTCATATTGATATTGGCCTCGACACTGAA
GTCGCATCTGAGGCTGTCACATTGGACAGTGTTCTAAAAACTGTTTTAAAACCTCGTCAA
ACTAAAACTACTTTGGACGATAAAATTATTAAAGTAAGGAAGCAACGGTTGCTTAAAAAA
TCTATAAATGATGTCAAAGAAAATACTAATGACAAAATAAAAGCTGATGATAAACAAGAA
ATTGATGAGTCAAAAAAAGCTGTAGATAATGAGCAACAAGACCATGACTCAGCAGAAAGT
GATATTACAGAAAGTGAAGAAGATGAAACTGATTTGTTGACTGATAAAATAAAGATCAAA
GAAAAGAAAGGTAAAAAACCAACAAAGTCTACCGATTTCATCGACGAAGTACAAAAATCT
GTTGCAATGAAAAAAGCTGAAACTGCAAATGATGAGGATTTAAGTGATTCAGAATTTTTT
AAATCTTGTCCTGATTGGGATCCAAATATGTCATTTAAGGACATGAATCTTTCACGGCCA
TTATTAAAAGCAACATCTGCAATTAATTATGTCACACCAACCCCTGTACAACAAGCTTCA
ATACCACTCGCTTTGTTGGCAAAAGATCTTTGTGTCTGTGCCACAACTGGTACAGGAAAA
ACAGCTGCATTTATGCTTCCTATTTTGGAGCGGTTAGTTCACAAACCAAGGACTGCTCCT
GCTGTTAGAGTTCTTTGTCTAGTTCCAACTCGAGAATTAGCAGTCCAAGTTCATGTGGTA
ACAAGGCAACTTGCTCAATTTACAAGTATTCAAATTTGCTTAGCGGCTGGCGGACTTGAT
CTTAAGTCACAGGAAGCTGCATTAAGACAAGGACCAGATGTTGTTATTGCTACGCCTGGA
CGGTTAATTGATCATCTTCATAATACCCCCTCATTTCAACTGAACAGCGTTGAAATTTTA
GTTCTGGATGAAGCTGATAGAATGCTGGATGAATTTTTCGCAGACCAGATGCAAGAAATC
ATTAAACTTTGCGCTGCTCAAAGACAAACTATGTTATTTTCTGCCACAATGTCAGAAAAA
GTCAAAGATCTTGCAGCTGTTTCATTAAGAAACCCTACCAAAGTGTTCATAAACAGTAAT
ACAGATGTTGCGCCATTTCTAAGGCAAGAGTTTATTAGAATTCGTCCAAATCGTGAAGGT
GACAGAGAAAGCATTGTGGCTGCATTATGTTCTCGTACGTTTGTTTCTCATGTTCTGATA
TTTACACAAACTAAAAAGCAAGCGCATAGAATGCATATTGTGCTTGGTTTGCTAGGGTTA
AAAGTTGGTGAGTTACATGGAGATTTAAATCAATCGCAAAGGCTTGAAAGTCTTCAAAAA
TTTAAAGGAGCGGAAATTGATATATTGGTTTGTACTGATCTTGCATCTCGTGGTCTTGAT
ATTGAGAATGTTAAAACTGTTATCAATTTTACAATGCCTAATTCTGTTAAACATTACGTA
CACAGAGTAGGAAGAACAGCTAGAGCAGGGAAGAGTGGACGATCAGTATCTCTGGTTGGT
GAAACGGAGCGTAAAATGTTAAAACAGATTGTTAAACAGGCAAAAAACCCGGTAAAAAGT
AGAATCATTCCACCAGAAGTTATAACAAAATTTAAATCAAAACTTACCGAAATTGATGAA
GATGTCGGAAATGTTTTACGGCTGGAGACAGCAGAAAAACAACTAGCGCAATCAGAACAT
GATGTCAAAAAAGGTCAACGAATGCTTCAGCCACAGAAAGGCGAAGAAAAAGTTAAACGT
GAATGGTTCCAGAGTAAATTTGAAAGAGAGTTTGCTAGAGCCGAAAGGATGTTGGGCATT
CATTCTGAAGCATATACTAAGGGTAAAAAAGGAAAAGTCAATAAAAACAAAAAAGAATTT
TTTAAAAAACCTGCGAATGCATCCGACCGCGCCAATGCTGAATTAGAAAAAGTCCAAGCG
TATCAAAAACGGGAAGCAAAAAGAAACAAAAGGTTAAAGAGAGTTAGAGCTTGTGCAGAG
GATCCTGTTCCATCGAAAGTTGCGAAAACAAAAAAGAAAAAATCCTCATTTGAAAAAGAA
CTCACAGACACCAGAAAGAAAAGCGTTAAAAATTTTCGTTCAAATGTTCAACAAAAAAGA
AAGGGAGCTTTAGGAAAAACAAAGTTTCAAAAAGGAAAACGTCAAAAATATTAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[210-238] 10.761 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[229-430] 5.0E-55 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[234-404] 7.3E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[241-415] 29.132 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[282-571] 4.71E-65 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[361-369] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[426-589] 20.567 |
| Pfam |
Helicase_C (IPR001650) - T[446-550] 5.2E-28 |
| CDD |
Helicase_C (IPR001650) - T[458-558] 1.71298E-32 |
| SMART |
Helicase_C (IPR001650) - T[469-550] 6.7E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 51.928 % | 712 | 0 |
| DDX47_HUMAN | 41.436 % | 272 | 2.35E-83 |
| DDX49_HUMAN | 36.631 % | 234 | 8.8E-69 |