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TRANSCRIPT CARD

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  1. Region 'REG00000682' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Region 'REG00000875' > 
  4. Transcript 'KH2012:KH.S544.3.v1....' > 
  5. Transcript 'Moocci.CG.ELv1_2.S47...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S470798.g16012.01.t

Possible name(s)

TSEN2

Gene model

Moocci.CG.ELv1_2.S470798.g16012

Location

S470798 [4,841 / 5,931]

Sequences

Amino acid sequence

Length: 194

>Moocci.CG.ELv1_2.S470798.g16012.01.p
MYGFFGEIVTTENEDVLALTLEESFFLSYILGCLFINEEENSHIDISKQWEIYCTLKPNF
PVTYAAYNHFRAKGWVPKDGIKYGAHFILYQKGPPFYHSTYVVKIETLSPELKVVENHDL
ATSNTESWTSIAGLNRLCSSVAKILLCCGVIIPDNVEEIITNPNCLKIFKIHERIIKRWI
PSKDREKELDAESL

Nucleotide sequence

Length: 585

>Moocci.CG.ELv1_2.S470798.g16012.01.t
ATGTATGGATTTTTTGGAGAAATTGTTACTACTGAAAATGAAGATGTTTTAGCTCTTACA
TTAGAAGAAAGCTTTTTTTTATCATATATATTGGGTTGTTTATTTATAAATGAGGAGGAA
AACTCTCATATTGACATTTCAAAGCAATGGGAAATTTACTGCACACTTAAACCGAATTTT
CCAGTAACATATGCAGCGTACAATCACTTCAGGGCAAAAGGATGGGTTCCTAAGGATGGA
ATTAAATATGGGGCTCATTTTATTTTGTATCAAAAAGGGCCACCTTTTTATCATTCCACA
TATGTTGTTAAAATTGAAACATTATCACCTGAATTAAAGGTTGTTGAAAATCATGATTTA
GCAACTAGTAATACTGAGTCTTGGACATCAATCGCCGGATTAAATAGACTGTGCTCATCT
GTAGCTAAAATATTGTTATGCTGTGGTGTAATTATCCCTGACAATGTAGAAGAAATTATA
ACAAACCCAAACTGCTTAAAAATCTTTAAAATACATGAAAGGATCATCAAACGGTGGATT
CCCTCAAAAGACAGAGAAAAAGAATTGGATGCAGAAAGCTTATGA

InterProScan

Pfam
tRNA_intron_Endonuc_N (IPR006678) - T[3-46] 1.8E-4
PANTHER
tRNA_splic (IPR006676) - T[12-188] 2.0E-57
Gene3D
tRNA_endonuc-like_dom_sf (IPR011856) - T[56-162] 1.1E-24
SUPERFAMILY
tRNA_intron_Endo_cat-like_sf (IPR036167) - T[58-156] 3.49E-23
Pfam
tRNA_intron_Endonuc_cat-like (IPR006677) - T[61-155] 1.9E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SEN2_HUMAN 41.573 % 145 8.25E-42