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  1. Transcript 'Moocci.CG.ELv1_2.S45...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S451743.g14555.01.t

Possible name(s)

PCF11

Location

S451743 [2,421 / 15,012]

Sequences

Amino acid sequence

Length: 1,475

>Moocci.CG.ELv1_2.S451743.g14555.01.p
MEGIENAVEEYHASLIDLTFNSKPHINALTMLAEEDMEYAEHIVKLIEVRLNEVSGDAKL
PIMYLMDSIVKNVGGNYKPYFARNLVTTFLSAFRSGNDKTKMSLYKLRTTWDEYFPLRRL
FELDTEVKTLDPNWPVKELPVHLQDKQTKSIHVNPKFIKKTEQSAVSANAPVENDLKQDL
INKQKQLLELQQQKLLLELEQTKRQLAKREKRKLSEKEHHEPVRDPRTKAQVSNLKITVP
VKEKIPTIKEPPKDMSKSKKPGIIAKQIAMQRTGNSNVSTKTKLNQGNKKNATNENKKSE
QRLNVKKSPNINKSALSPLRKGTSSPKAKNKSDKKNKSDVKAKPEKDFSKIPPKSIREMN
RIPKKRPAATVPSTPPRNKTRSMSPSKGEKKRTLLVHDERKREREPTRSSEGSISPQFSS
ESESDLPQNKSWKPPAPKRARVPQSHPRGLRNEHYQGGFPERNQRFSVDENVEIPSELNL
NHQREILQQADSQLKSGQLTHEQHQDLLKQLHQLFELQRMRSMQLMGISSEEFNEGHVRR
EHFPQPQKHGHPGPRRNSTGEPVNYEQKIPPQRRSAGSAVGNGKRNLNKNLSKNNSKDPR
LKNKIDHDKKLPLRSFANTMQKGDFRKLKGNKSDRKPLLEEPEDYIIASMTPSKEAYQKH
SMVLKQGSTEAEKAYLAHKKKIMVSTYSKHIVHPDMPSSDDASTINKEDSTDESSAVEDV
AKAENSDTNPESLGQEPHKDVHTISSPPLPLKKRKYKSAETIDDPAESSSNEQVDVNAKK
HSPSPVDTDLSSNNADGDDNAATEKLDRSMTPPPIPEFDSKSKQKLLKRKAVEKERSSSL
PLEGEEIFNKLNKDPRMRKNFSRHDDDEEEFQHNEHQQTPPTDERIFERGGSLPENDEDH
HFRMMMEEERNRMEWDAELQKHLEMEQMHHDRRMRSIRPPLRGERGGRIMERRGRGRGFF
RGRVRDIRPMWHNERRWRDDMDGPPRRRSPGFSHGPPGPPLRGNIRRPPPNQPPRRFSPP
PPQRRMREEGLNQEWDDDFRRGPPREWNRRGPGPRPIRHPAPAGRDPQRFMEYNDHRPDH
PPPPQERFHHERPPIHNEPHHQPMAQQNVQHSPPREPPVQRHEPQPPPAADISQVNVNKL
LQDLLTMGILPGNEKIEELSPKKPSSGSNSRSQSPSLPLPDKEPVVKTDSKAASSTIEED
LLNLDPDGNLPEVDMNDAEALKIRHTEIINRLYTGIQCSACGMRFTACQTDIYAEHLDWH
YRLNRKDKEGSQQSHREFYPTAGGWIMYEEIDDPMKRSKSQVFEEGTVAEEEDDTKDDSG
DLTVPVSGKENEDFCKVCKEPFQTVYNEEEDEWQFINCVVVNGETFHPNCYGDHQDDIDI
ACLPTPVRVPIYNPLDVEKDNKEIEVKKEENTAEKTSTDEQTGEKVAVELFPSENAAPLK
EENPIKEEMESFIEDRNAALPADMSNLKQENLSGN

Nucleotide sequence

Length: 4,660

>Moocci.CG.ELv1_2.S451743.g14555.01.t
TTTAAATATGTTGATATTTTAAGGCAACTTATTGATTGTTTAAACTTTTAGGTGCTGATG
TTGCTACTTGCTTAATGGAATTATAGTGAAAATCATGAGTACTGGTACGGGAATTTAATG
TTGAAAGGCTAAAATCAAGCTACAATAGCAGCTGCTTTAAATATATTTTTCAATCCATAA
TTTTCTTATGAAAAGACACTTGAAAGTTACCTGTTATTAAATTCGTGTCCACAAAATGGA
AGGAATAGAAAATGCAGTTGAAGAATATCATGCTTCCCTTATCGATCTTACTTTCAATTC
AAAACCCCATATAAATGCGCTTACGATGCTAGCTGAAGAAGACATGGAGTATGCTGAGCA
TATTGTCAAGCTTATAGAAGTTCGTTTAAATGAGGTTTCGGGTGATGCCAAACTTCCCAT
CATGTACCTAATGGATTCCATTGTGAAGAATGTAGGGGGAAATTACAAGCCTTACTTCGC
AAGGAACCTAGTGACCACATTTCTATCTGCGTTCAGATCTGGGAATGATAAGACAAAAAT
GAGTTTATATAAACTACGAACAACTTGGGATGAATACTTTCCATTGCGTCGCTTGTTTGA
GTTAGATACTGAAGTGAAAACTTTGGACCCCAATTGGCCTGTTAAAGAACTTCCTGTTCA
TTTGCAAGATAAACAGACAAAAAGTATTCATGTTAATCCAAAATTCATAAAGAAGACTGA
ACAATCTGCTGTAAGCGCAAATGCTCCTGTGGAAAATGATTTAAAACAAGATCTGATCAA
CAAACAAAAGCAATTACTTGAACTGCAACAACAGAAATTATTATTGGAACTGGAACAGAC
CAAGCGACAACTGGCTAAAAGGGAAAAGCGTAAACTAAGTGAAAAAGAGCATCATGAACC
TGTCCGAGATCCTAGAACTAAAGCACAAGTGTCCAATTTAAAAATCACAGTTCCAGTCAA
AGAAAAAATTCCAACCATAAAAGAACCACCTAAGGATATGAGCAAAAGTAAAAAGCCTGG
GATTATTGCCAAGCAAATTGCTATGCAAAGAACTGGAAACTCGAATGTTTCAACAAAGAC
CAAATTAAACCAAGGGAACAAGAAAAATGCAACAAATGAAAATAAAAAATCTGAGCAAAG
ATTAAATGTCAAAAAATCGCCAAATATTAATAAATCTGCTTTGTCTCCTTTAAGAAAAGG
AACTTCGTCGCCCAAAGCTAAAAATAAATCTGATAAGAAAAATAAAAGTGATGTTAAAGC
TAAGCCTGAAAAGGATTTTTCTAAAATTCCCCCTAAATCAATAAGAGAAATGAACAGGAT
TCCTAAAAAGCGTCCTGCTGCTACAGTTCCTTCAACTCCACCTCGAAACAAGACGAGATC
GATGTCACCTAGTAAAGGTGAGAAAAAAAGGACTTTACTGGTTCATGATGAGAGAAAACG
AGAAAGAGAACCAACCAGATCAAGTGAGGGTTCAATTTCTCCTCAGTTTTCTTCTGAATC
TGAAAGTGACCTACCACAAAATAAATCCTGGAAACCTCCTGCTCCAAAACGAGCAAGAGT
TCCACAATCTCATCCTAGAGGCTTGAGGAATGAACATTATCAAGGTGGATTTCCAGAAAG
AAACCAACGATTCAGTGTAGATGAGAATGTTGAAATTCCTAGTGAACTGAATTTAAACCA
CCAAAGAGAAATATTGCAACAGGCTGACAGTCAACTGAAAAGTGGCCAGCTAACTCATGA
ACAGCATCAGGATTTGTTAAAGCAACTGCATCAGCTTTTTGAACTTCAAAGAATGAGAAG
TATGCAGCTTATGGGAATATCTTCTGAAGAGTTCAATGAAGGTCATGTTAGGAGGGAACA
CTTTCCCCAACCTCAAAAACATGGTCATCCTGGGCCCAGAAGAAATAGCACAGGAGAGCC
TGTTAATTATGAACAGAAAATACCACCTCAACGAAGATCTGCGGGATCTGCAGTGGGCAA
TGGTAAAAGAAACCTAAATAAAAACTTGAGTAAAAATAATAGCAAGGATCCAAGACTAAA
AAATAAAATTGATCATGATAAAAAACTTCCGCTTCGATCATTTGCAAATACTATGCAAAA
AGGTGACTTCCGAAAACTCAAAGGTAATAAGTCTGACAGAAAACCATTGTTGGAAGAACC
GGAAGATTATATAATAGCATCCATGACACCCAGTAAAGAAGCTTATCAAAAACATTCCAT
GGTTTTAAAGCAAGGATCTACTGAAGCTGAAAAAGCTTACCTTGCCCATAAAAAGAAAAT
AATGGTTTCCACCTATTCTAAGCATATTGTTCATCCAGATATGCCAAGCAGTGATGATGC
AAGTACTATTAATAAAGAAGATTCAACAGACGAAAGCTCTGCTGTTGAAGATGTGGCTAA
AGCTGAAAATAGTGATACAAACCCAGAATCCTTAGGTCAAGAACCTCATAAGGATGTGCA
TACTATATCTTCACCTCCACTACCTCTTAAAAAACGCAAATATAAGTCGGCGGAAACTAT
TGATGATCCAGCTGAATCTTCTAGCAATGAACAAGTAGATGTAAATGCAAAGAAACATTC
ACCATCTCCAGTTGATACTGATTTGAGTAGTAATAATGCAGATGGAGATGACAATGCTGC
TACTGAAAAATTAGACAGAAGCATGACACCTCCTCCTATACCAGAATTCGATTCGAAATC
CAAACAGAAATTATTAAAAAGAAAAGCAGTTGAAAAAGAAAGATCTTCTTCATTACCATT
AGAAGGAGAAGAAATATTTAATAAACTAAATAAGGATCCAAGAATGCGTAAAAACTTTAG
TCGTCATGATGACGATGAAGAAGAATTTCAGCATAACGAGCATCAGCAAACTCCTCCAAC
TGATGAAAGAATTTTTGAAAGAGGTGGATCTCTTCCTGAAAATGACGAAGATCATCATTT
TCGAATGATGATGGAAGAAGAAAGAAATAGAATGGAATGGGATGCAGAGCTCCAAAAACA
TTTAGAAATGGAACAAATGCACCATGACAGAAGAATGAGGTCAATAAGACCTCCTTTAAG
AGGGGAGAGAGGTGGCCGAATAATGGAAAGGCGCGGTAGAGGTCGAGGATTTTTCCGAGG
AAGAGTCAGAGACATTAGACCAATGTGGCACAATGAGCGCCGGTGGAGAGATGACATGGA
TGGTCCTCCAAGGCGTAGAAGCCCAGGATTTAGTCATGGTCCACCAGGCCCCCCTCTCCG
TGGAAACATTAGACGACCTCCACCAAATCAACCTCCAAGACGATTTAGTCCTCCACCACC
GCAACGAAGAATGAGGGAAGAAGGGTTAAATCAAGAATGGGATGACGATTTTCGAAGAGG
CCCACCAAGAGAATGGAATCGCAGAGGACCGGGTCCGCGACCAATTAGACATCCAGCTCC
TGCAGGGCGAGATCCCCAGCGTTTTATGGAATATAATGACCATCGACCTGATCATCCTCC
TCCGCCACAAGAAAGATTCCACCATGAACGACCTCCAATTCACAATGAACCTCACCACCA
ACCTATGGCTCAGCAAAATGTACAACATTCGCCTCCAAGGGAACCCCCTGTTCAACGCCA
TGAGCCGCAACCTCCACCAGCTGCTGATATTTCTCAAGTTAATGTCAATAAACTTCTCCA
AGATCTACTTACAATGGGGATTTTGCCTGGAAATGAGAAGATAGAAGAACTATCACCTAA
AAAACCTAGTAGTGGTTCAAATAGCAGATCACAAAGTCCATCTCTTCCATTACCAGATAA
AGAGCCCGTAGTAAAGACTGATTCGAAAGCTGCTTCATCCACTATTGAAGAAGACTTACT
GAACTTAGATCCAGATGGTAACTTACCTGAAGTTGACATGAACGATGCTGAAGCTTTAAA
AATACGACACACTGAAATCATAAATCGCTTGTATACTGGTATTCAATGCTCAGCATGTGG
AATGCGTTTTACAGCCTGTCAAACTGACATATACGCAGAGCATTTAGATTGGCATTACAG
GCTAAATAGAAAAGATAAAGAAGGGTCGCAACAATCACATCGGGAGTTCTATCCAACTGC
TGGGGGTTGGATTATGTATGAGGAGATAGATGATCCGATGAAAAGATCAAAGAGTCAAGT
GTTTGAAGAAGGAACTGTAGCAGAGGAGGAAGATGATACTAAAGATGACTCTGGTGATCT
CACTGTACCTGTCAGTGGAAAAGAAAATGAAGATTTCTGCAAAGTTTGTAAAGAACCATT
TCAAACTGTTTATAATGAGGAAGAAGATGAGTGGCAGTTTATTAACTGTGTTGTTGTTAA
CGGCGAAACATTCCATCCTAATTGTTATGGGGATCACCAAGACGATATTGACATCGCATG
TCTACCCACACCTGTACGAGTCCCAATTTATAATCCTCTGGACGTGGAAAAAGATAATAA
AGAAATCGAAGTAAAAAAGGAAGAGAATACAGCAGAAAAAACAAGTACTGACGAGCAAAC
TGGTGAAAAAGTAGCAGTAGAATTATTCCCATCTGAAAATGCTGCTCCTCTTAAGGAAGA
AAATCCAATCAAAGAAGAAATGGAGTCATTTATTGAAGATAGAAATGCTGCATTACCAGC
AGACATGAGTAACCTAAAACAAGAAAACTTGTCAGGTAAT

InterProScan

Gene3D
ENTH_VHS (IPR008942) - T[2-128] 9.1E-36
ProSiteProfiles
CID_dom (IPR006569) - T[3-131] 30.065
SUPERFAMILY
ENTH_VHS (IPR008942) - T[5-136] 9.81E-34
SMART
CID_dom (IPR006569) - T[6-128] 1.8E-23
Pfam
RNA_pol_II-bd (IPR006903) - T[59-113] 4.2E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PCF11_HUMAN 50.901 % 216 1.77E-56