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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'
  2. Transcript 'Haaura.CG.MTP2014.S1...'
  3. Transcript 'Haaura.CG.MTP2014.S2...'
  4. Transcript 'KH2012:KH.C1.1078.v1...'
  5. Transcript 'Moocci.CG.ELv1_2.S42...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S425489.g13039.01.t

Possible name(s)

ZNF226; ZNF227; ZNF658

Location

S425489 [2,114 / 3,509]

Sequences

Amino acid sequence

Length: 464

>Moocci.CG.ELv1_2.S425489.g13039.01.p
MPKASVKKCFECEECNSCFNNNYDLKKHIKTHIRDKPYKCRICRYKTDRNYDLKEHMRCH
TGEKPYVCDICDSSFARKSNLKIHKRVHTGETPYHCCVCDKSFKQMSGLRSHFVIHTGEK
LYKCSLCDSSFARSSSLKLHQVVHTGEKSFVCEICDKRFGRQTSLKSHMVSHTKIKPHLC
KICNSSFAQPHRLKIHMKIHTGEKPYECPICQIKFRSKSTLNSHIVIHSDDKPFSCPECD
KKFKEKAQLRKHSVKHLSDEEKPHHCVLCGFKTARFSTLKKHIEVIHFDRGEKQFQCKVC
SKKFWTKHNVNSHMLCHKEGKNFECDVCGLKFKLESSMKNHQNIHTQKKTFDCPQCNEKF
LLRHLLKHHLLIHTRNFPYECQLCKAKFNLIKELYAHRNEVHVKDNFFMCTKCPGKFGDN
AKLMRHYNTLHTRKSSKKFCLKCEFCDTYFNQQTALTRHVLRLH

Nucleotide sequence

Length: 1,395

>Moocci.CG.ELv1_2.S425489.g13039.01.t
ATGCCAAAGGCTTCAGTAAAAAAGTGTTTTGAATGTGAAGAATGCAATTCTTGTTTTAAT
AATAACTATGATTTGAAGAAGCATATAAAGACTCATATACGAGATAAGCCCTATAAATGC
AGAATATGCAGGTACAAAACTGATAGAAATTATGATTTAAAGGAACATATGCGATGTCAT
ACAGGTGAAAAGCCTTATGTGTGTGATATTTGCGACAGCTCATTTGCTAGAAAATCAAAT
TTAAAAATTCACAAGCGAGTGCATACAGGTGAAACACCTTACCATTGCTGTGTCTGTGAT
AAATCTTTTAAACAGATGTCTGGTCTGCGGAGTCATTTCGTCATTCACACTGGTGAGAAG
CTTTACAAGTGTTCATTGTGTGATTCTTCTTTTGCTAGATCTTCAAGTTTAAAACTACAT
CAGGTTGTTCATACCGGAGAAAAAAGTTTTGTTTGTGAAATATGTGATAAGCGCTTTGGA
AGACAGACTTCATTAAAATCACACATGGTTTCACATACAAAAATTAAGCCTCATTTATGC
AAAATCTGCAATAGTTCGTTTGCTCAACCACATCGTTTAAAAATTCACATGAAAATTCAC
ACGGGTGAAAAACCATATGAATGCCCAATTTGTCAAATCAAATTTCGATCAAAGTCTACA
TTAAATAGTCACATTGTAATACATTCTGATGATAAGCCCTTTAGTTGTCCTGAGTGTGAT
AAAAAATTTAAAGAAAAGGCTCAACTTAGAAAACATTCAGTTAAACATTTATCAGATGAA
GAAAAACCTCATCATTGTGTACTTTGTGGTTTTAAAACTGCCAGGTTTTCTACTTTAAAA
AAACACATCGAAGTTATACATTTTGACCGAGGAGAAAAACAGTTTCAATGTAAAGTATGT
TCTAAAAAGTTTTGGACAAAACATAATGTAAACAGTCATATGCTATGCCATAAAGAAGGA
AAAAATTTTGAATGCGATGTTTGTGGACTAAAATTTAAGTTAGAATCTTCCATGAAAAAT
CATCAAAATATACACACACAGAAAAAAACATTTGATTGTCCACAATGCAATGAAAAGTTT
TTATTGCGGCATTTGCTTAAGCACCACTTACTGATTCATACTAGAAATTTTCCATATGAA
TGCCAACTGTGTAAGGCAAAATTTAATCTGATAAAAGAGCTTTATGCTCACAGAAATGAG
GTACATGTTAAGGATAATTTTTTCATGTGCACTAAATGCCCAGGAAAATTTGGGGACAAT
GCGAAATTAATGAGACATTACAACACTCTTCACACAAGAAAATCTTCCAAGAAGTTTTGC
TTAAAATGCGAGTTTTGTGACACCTATTTTAATCAACAAACTGCACTTACACGTCATGTA
CTAAGATTACACTGA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[7-66] 2.98E-11 - T[50-103] 8.27E-20 - T[102-159] 1.11E-20 - T[159-215] 3.02E-17 - T[204-256] 6.26E-15 - T[293-345] 7.28E-12 - T[332-388] 2.61E-12 - T[378-427] 5.59E-6
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[10-37] 13.755 - T[38-65] 13.277 - T[66-93] 15.687 - T[94-121] 13.401 - T[122-149] 14.794 - T[150-177] 13.36 - T[178-205] 14.316 - T[206-233] 12.986 - T[234-261] 11.988 - T[295-322] 9.93 - T[323-350] 12.528 - T[351-378] 11.177 - T[379-407] 9.432 - T[408-436] 10.263 - T[441-464] 9.889
SMART
Znf_C2H2_type (IPR013087) - T[10-32] 0.0028 - T[38-60] 0.011 - T[66-88] 5.4E-4 - T[94-116] 0.067 - T[122-144] 0.0038 - T[150-172] 2.0E-4 - T[178-200] 0.027 - T[206-228] 3.5E-4 - T[234-256] 0.001 - T[264-287] 0.51 - T[295-317] 0.11 - T[323-345] 0.014 - T[351-373] 0.55 - T[379-402] 0.71 - T[408-431] 0.8 - T[441-464] 0.015
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[12-32] . - T[68-88] . - T[96-116] . - T[124-144] . - T[152-172] . - T[180-200] . - T[208-228] . - T[236-256] . - T[297-317] . - T[325-345] . - T[353-373] . - T[381-402] . - T[410-431] . - T[443-464] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
Z658B_HUMAN 39.583 % 314 6.78E-99
ZN658_HUMAN 39.352 % 311 3.71E-96
ZN227_HUMAN 37.363 % 303 6.91E-95