Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 846

>Moocci.CG.ELv1_2.S417705.g12632.01.p
MARLSIYFAALFTLATWVKQTEGSGTFQLTIDRLVNERGLDSEGSCCSGEGNGRQRCQKT
CQTSFKVCLTHYQYPMRENPTCTFAMRKTPVIGENSFNPQNTEYFQKNPFEKNFAFTWPG
SFSLLIDVFHEDPKQQTTMSPDTARYFSSNSVGSKNIVSLHFHGSVKGGDDWTRKIYRHQ
DKQLHYSFRVKCDEHYYGIGCSAYCRPKNNRFGHFVCDENGQKVCMEGWTGYEAGLECTK
PACKAGCSSEHGYCEKPNECRYTLAFQLFDFWICVNFSANILTRVGLNAFGFVKLRTCSQ
STHMSCVCMFIYWTLEVIAMFVFDRCRPGWMGPNCTQCISFPGCSHGSCTIPYQCICDPG
WGGTFCTLDLNYCTNHKPCKNNAICNNVGEGSYKCVCPEGFEGVNCEIEINECASNPCKN
EAKCIDEINGYRCECPPNFFGVNCEKTDLTCADNPCLNGASCSDTDLQFVCTCPENFYGL
RCQNVENKCLSNPCLNGGLCTSQNSGYKCECPSGFFGNECQNTDHCTHNPCNNGATCSSL
EEGFVCSCLVGFTGPTCDVDVDECADKPCINGGTCRNLRGSFECFCPPGYSGSLCHTLSN
KDSSALRNIGGEKKTNIFIVSDKNGSDLTTTQWIVICISAVLVVLFIVVVGGCFAYKRKA
SYSAGRRISRQADMSLPLPSNDNQLSDVTIVRTKRPLKATKPVPNASKTKLPKTTKLPSL
TYAIDTNSSNDRIFASTDSLNHGGPIVKRPKSTSSSSYLTRLSTSSYQQHLRPDRSQSES
EQNVHSLYSYNKRRSLDHDQRSDIPLLKPAPSAHLPTYEEACEEHDGLLSIRNARRSVPN
KYGDKL

Nucleotide sequence

Length: 3,394

>Moocci.CG.ELv1_2.S417705.g12632.01.t
ATGGCAAGATTGTCCATTTATTTTGCAGCGTTGTTCACGCTAGCCACGTGGGTGAAGCAG
ACTGAAGGTTCTGGGACATTCCAACTAACTATTGATCGACTGGTGAACGAAAGGGGTTTG
GACAGTGAGGGATCCTGTTGTTCAGGGGAGGGAAACGGGAGGCAGCGTTGTCAGAAAACC
TGTCAGACTTCGTTTAAAGTTTGTCTTACACACTACCAGTACCCCATGAGAGAAAACCCC
ACTTGTACCTTCGCTATGCGAAAAACCCCGGTCATTGGGGAAAATTCATTTAATCCACAA
AACACAGAATATTTCCAAAAAAACCCATTCGAGAAAAATTTTGCTTTTACATGGCCGGGA
TCATTTTCTCTTCTAATAGACGTTTTTCACGAAGACCCGAAGCAGCAAACTACGATGTCA
CCTGATACCGCAAGATATTTCTCTTCAAACTCCGTTGGTTCCAAAAACATCGTTTCGCTT
CATTTCCATGGATCGGTGAAGGGGGGAGATGACTGGACGAGGAAGATTTACCGCCACCAG
GACAAACAGCTTCACTATTCCTTCAGGGTGAAATGCGATGAACATTACTATGGCATCGGT
TGTTCGGCTTACTGTAGACCAAAGAACAATCGGTTTGGTCATTTTGTTTGTGATGAAAAT
GGTCAGAAGGTTTGCATGGAGGGTTGGACAGGGTATGAAGCGGGACTTGAATGCACAAAA
CCTGCATGTAAGGCCGGGTGCAGTAGCGAACACGGATACTGCGAGAAGCCAAACGAATGC
AGGTATACTTTAGCTTTCCAACTATTTGATTTTTGGATTTGTGTGAATTTTTCAGCTAAT
ATATTGACTAGAGTTGGATTAAATGCTTTTGGTTTCGTTAAGTTACGAACTTGTTCACAA
TCCACTCATATGAGTTGTGTTTGCATGTTTATTTATTGGACACTTGAGGTAATTGCCATG
TTTGTTTTTGACAGATGCCGACCAGGGTGGATGGGACCCAACTGTACCCAGTGCATCAGC
TTCCCTGGGTGCTCGCACGGATCTTGTACCATCCCTTACCAATGCATCTGTGATCCAGGC
TGGGGAGGAACTTTCTGCACTTTGGATTTGAATTATTGCACGAATCACAAACCTTGCAAG
AACAACGCTATTTGCAACAACGTTGGTGAAGGAAGTTACAAATGTGTTTGTCCTGAAGGT
TTCGAAGGCGTCAATTGTGAAATTGAAATCAATGAATGCGCTTCGAATCCTTGCAAAAAC
GAAGCAAAATGCATTGATGAGATAAACGGATATAGATGCGAATGTCCTCCCAATTTTTTT
GGGGTGAATTGCGAGAAAACAGACCTGACCTGTGCTGATAACCCTTGTCTCAACGGAGCA
TCTTGCAGCGACACAGATCTGCAATTTGTATGCACTTGCCCCGAAAACTTCTACGGATTG
CGTTGTCAAAACGTCGAGAACAAATGCTTATCAAACCCATGCTTAAACGGGGGCTTGTGC
ACGAGTCAAAATAGTGGGTACAAATGCGAATGTCCATCTGGTTTTTTTGGAAACGAGTGC
CAAAATACTGACCACTGCACACATAATCCTTGTAACAATGGAGCAACTTGCTCAAGTTTG
GAAGAAGGGTTTGTTTGCAGTTGTTTGGTTGGTTTTACCGGGCCCACTTGCGATGTGGAC
GTTGATGAGTGTGCGGACAAACCTTGCATCAATGGGGGAACTTGTCGCAACCTCAGGGGA
TCCTTTGAATGCTTTTGCCCTCCTGGTTATTCTGGAAGTCTCTGTCACACTCTTAGTAAC
AAAGACTCAAGCGCTTTGCGTAATATTGGTGGTGAGAAGAAAACCAACATCTTTATTGTG
TCTGACAAAAATGGAAGTGATTTAACAACAACGCAGTGGATTGTGATTTGCATAAGCGCC
GTTTTGGTTGTACTTTTTATAGTTGTGGTCGGGGGTTGTTTTGCTTACAAACGAAAAGCT
TCCTACAGCGCTGGCAGACGAATTTCCCGTCAAGCCGATATGTCGCTTCCCCTTCCATCC
AACGACAATCAGTTAAGTGACGTCACGATTGTAAGAACAAAGAGGCCTTTAAAGGCAACG
AAACCAGTTCCAAATGCGTCTAAAACTAAATTACCGAAGACTACAAAGTTACCTTCCCTT
ACTTACGCTATCGATACGAATTCTTCCAACGACCGGATTTTCGCCTCAACGGATAGTTTG
AATCATGGTGGACCAATTGTGAAACGACCAAAATCCACCTCATCTTCCTCTTACTTAACG
CGATTGTCTACTTCAAGTTATCAGCAACACCTACGTCCAGATAGATCACAAAGTGAAAGT
GAACAAAATGTTCATTCACTATATAGTTATAACAAACGACGTTCCTTGGATCACGATCAA
AGGTCGGACATACCGTTGTTGAAACCCGCTCCATCTGCACATTTGCCTACTTACGAAGAA
GCTTGTGAAGAACATGATGGCCTCCTTTCCATTAGAAACGCTCGGCGATCTGTTCCCAAC
AAATACGGCGACAAGTTATAGCGCGTTAACACAAAGTGTTTGAGAAAGTGGAAACTGCCG
GCCAAACGACGTGTTACGACCAACAATCAAGTTTGTTGTTCAACAAAAGTCAATCATTCC
AAGGTTTCGCAATATATGGAGGCTGCTACGAGTTCAGTGAAGACGCCCAAAGTCTTAACG
ACAGTTTTATTCACAAATTAAATTTTATATATATTCTATTATTATGTTACTAGTTACCGC
TATGTTAAGTTTGATATTTACTTACATAGCACAAATTTATTTGTATATTTACCATGACAA
TTTTGCGTAGTTATGTATATTTTGAAACTTTTTTTCAAATTACTTAACGATTTTACTGTG
TTCCTGTGAATACTCAATAAGTGAGTAGCTTACTTTAATATTTTCATAAATACTATTTTA
TTTTGTTATTTTTTTGTTTATAATAACCAAAGATAGCTATTTCACTTTATTCCGATTAGC
TGTTTATTTTAATATTGTATTGTTTTCATATATTATATTTATCACAAGAACACAATATAT
TTTAGTGTCCTAACGAATACAACTTTCGTTACTTAGTATTTTTCCTAAAATAGTTACCGT
TATGTAATATAAGTCGCTAGTTAGATTATATTTAAATATAGTTTTAAGTCTTTGACATTG
TATTTATTATATTGTATACATCGTGCCAAATGCGTGGAGAATTTACTTTCTCCCGTAACA
TTTTTAATAATATACATTGTTACTTTATAATAAATATTTATCGCCTATTCAATAGTTTTT
TTAGTATTTTAGGGTTGTTCTGATGACACTAAATAAAATTGTGATACTCCAATTATAGAA
CCTTGTGTGCTCATAACCATGTTGTTTTTTGAGG

InterProScan

Pfam	Notch_ligand_N (IPR011651) - T[24-97] 3.4E-21
Pfam	DSL (IPR001774) - T[172-232] 2.8E-21
SMART	DSL (IPR001774) - T[172-234] 1.1E-18
ProSiteProfiles	DSL (IPR001774) - T[190-234] 14.527
SMART	EGF-like_dom (IPR000742) - T[334-367] 0.94 - T[372-407] 2.2E-6 - T[412-445] 4.0E-7 - T[450-483] 4.8E-5 - T[488-521] 1.4E-5 - T[525-558] 7.3E-5 - T[563-596] 1.1E-7
Pfam	EGF-like_CS (IPR013032) - T[344-361] 0.066
ProSitePatterns	EGF-like_CS (IPR013032) - T[355-366] . - T[355-366] . - T[395-406] . - T[395-406] . - T[433-444] . - T[471-482] . - T[509-520] . - T[509-520] . - T[546-557] . - T[546-557] . - T[584-595] . - T[584-595] .
ProSiteProfiles	EGF-like_dom (IPR000742) - T[369-407] 21.609 - T[409-445] 21.977 - T[447-483] 18.09 - T[485-521] 19.204 - T[522-558] 21.119 - T[560-596] 23.748
SMART	EGF-like_Ca-bd_dom (IPR001881) - T[369-407] 5.5E-9 - T[409-445] 6.1E-10 - T[451-483] 0.022 - T[486-521] 0.01 - T[522-558] 2.0E-4 - T[560-596] 4.0E-13
Pfam	EGF-like_dom (IPR000742) - T[373-404] 5.0E-6 - T[413-442] 2.8E-8 - T[451-481] 2.4E-6 - T[489-518] 2.6E-7 - T[526-556] 4.2E-6 - T[564-593] 2.3E-9
SUPERFAMILY	Growth_fac_rcpt_cys_sf (IPR009030) - T[396-521] 7.53E-14
ProSitePatterns	EGF_Ca-bd_CS (IPR018097) - T[409-433] . - T[560-584] .
ProSitePatterns	EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[424-435] . - T[462-473] . - T[575-586] .