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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S47...' > 
  2. Transcript 'KH2012:KH.C10.208.v1...' > 
  3. Transcript 'KH2012:KH.C3.124.v3....' > 
  4. Transcript 'Moocci.CG.ELv1_2.S40...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S409139.g12189.03.t

Possible name(s)

HDDC3; LIN37

Gene model

Moocci.CG.ELv1_2.S409139.g12189

Location

S409139 [43,566 / 59,021]

Sequences

Amino acid sequence

Length: 436

>Moocci.CG.ELv1_2.S409139.g12189.03.p
MDLKQLIATADFAARKHKDQRRKDSNKTPYINHPIDNFLRKLNIKYLGVANILAEEGNVH
ELVVLQAALLHDTVEDTDTTIEEIEEKFGPIVRKIVAEVTDDKSLPKMERKRLQIVNAPN
KSSHAKLVKLADKLYNLRDLTKEMPEGWTEERVNEYFIWAHKVVAGLRGTNSVIEEKLDE
IFRSKNLNARSNLDDVLREIVEEAKVEDSSPTKDSDDTDTQSSQDGRMTLSDLDTPKKLA
HKISRKRKKKEEFKEDKNKPNACIMKLFDRQVDLALFQEDTPLYPICRAWMNNEPQERKR
PCLEPPSIPVPPTNDEEMEENCILDMPPADMPWKIIQNEKYKSPRIPSPPTQCDDRLEMY
IQKPDLEPAAEDLLLAHLSRWKNIRSSWCKKAMENEKRYESGMKLLREMANKNLYTNYEI
VTVELVEIFERDYERV

Nucleotide sequence

Length: 1,441

>Moocci.CG.ELv1_2.S409139.g12189.03.t
AAGGTCTATAATACTAAAATACTTCAAACTACTTCAAAAAATGGACTTAAAGCAGTTAAT
TGCCACTGCTGATTTTGCTGCTCGGAAACACAAGGATCAGAGGAGGAAGGACTCCAATAA
AACACCCTACATAAATCATCCCATTGACAATTTTCTCAGAAAGCTGAACATTAAATATTT
AGGTGTAGCCAACATTCTTGCAGAAGAAGGGAACGTGCATGAGTTGGTTGTTCTGCAAGC
TGCACTTCTTCATGACACTGTTGAAGACACAGACACAACCATAGAAGAAATTGAGGAAAA
ATTTGGCCCCATAGTAAGGAAAATAGTTGCTGAAGTAACAGATGACAAATCTTTGCCAAA
GATGGAAAGAAAAAGACTCCAAATTGTGAATGCACCAAACAAATCCTCACATGCAAAACT
TGTGAAACTTGCTGATAAGTTATACAATTTGCGGGATTTAACAAAGGAAATGCCTGAAGG
ATGGACAGAAGAACGTGTGAATGAATATTTTATTTGGGCGCATAAAGTTGTAGCTGGTTT
AAGAGGAACAAACAGTGTCATTGAAGAAAAACTTGATGAAATATTTCGATCCAAAAACCT
AAATGCGCGTTCTAATTTGGATGATGTTTTAAGGGAAATTGTGGAAGAAGCAAAAGTAGA
GGACAGCTCTCCTACTAAAGATAGTGATGACACCGATACACAAAGCTCACAAGATGGAAG
AATGACACTTTCAGACTTAGATACACCCAAAAAACTGGCTCACAAAATATCAAGAAAAAG
AAAGAAAAAAGAAGAATTTAAAGAAGATAAAAATAAACCAAATGCATGTATAATGAAGCT
GTTTGATCGGCAAGTAGACCTTGCATTGTTTCAAGAAGATACACCGCTTTATCCAATATG
TCGTGCATGGATGAACAATGAACCACAGGAGAGAAAGCGACCTTGCCTGGAACCTCCAAG
CATTCCTGTCCCTCCCACAAATGATGAAGAGATGGAAGAAAATTGTATCTTAGATATGCC
GCCTGCTGATATGCCTTGGAAAATAATCCAAAACGAAAAATATAAAAGTCCGAGGATCCC
TTCTCCTCCCACACAATGTGATGATAGGCTAGAAATGTACATTCAGAAACCGGATCTTGA
GCCAGCAGCTGAAGATCTGTTACTTGCGCATTTATCACGATGGAAGAATATAAGAAGCAG
TTGGTGTAAAAAGGCAATGGAGAATGAAAAGCGTTATGAATCAGGAATGAAGTTGCTGCG
GGAAATGGCAAACAAAAACCTTTATACTAATTACGAAATCGTAACGGTTGAGCTGGTGGA
GATCTTCGAGCGTGATTATGAACGTGTCTGAACCTGTTTATACAGTCAAAGCGATTGAAT
TTACTTGCTTTTTTATGAAAATCTCAGAATAAAATATATTTATTTATGTTTATATCAAAA
A

InterProScan

Pfam
HD/PDEase_dom (IPR003607) - T[11-148] 7.5E-14
CDD
HD/PDEase_dom (IPR003607) - T[47-157] 4.59494E-5
Pfam
LIN37 (IPR028226) - T[255-406] 5.1E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MESH1_HUMAN 60.87 % 227 3.89E-73
LIN37_HUMAN 32.068 % 89.4 3.2E-20