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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S6...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S41...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S78...' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'Moocci.CG.ELv1_2.S40...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S409139.g12189.02.t

Possible name(s)

HDDC3; LIN37

Gene model

Moocci.CG.ELv1_2.S409139.g12189

Location

S409139 [43,566 / 59,021]

Sequences

Amino acid sequence

Length: 460

>Moocci.CG.ELv1_2.S409139.g12189.02.p
MDLKQLIATADFAARKHKDQRRKDSNKTPYINHPIDNFLRKLNIKYLGVANILAEEGNVH
ELVVLQAALLHDTVEDTDTTIEEIEEKFGPIVRKIVAEVTDDKSLPKMERKRLQIVNAPN
KSSHAKLVKLADKLYNLRDLTKEMPEGWTEERVNEYFIWAHKVVAGLRGTNSVIEEKLDE
IFRSKNLNARSNLDDVLREIVEEAKVEDSSPTKDSDDTDTQSSQDGRIQRDVKGTLSDLD
TPKKTLSDFDTPKKLAHKISRKRKKKEEFKEDKNKPNACIMKLFDRQVDLALFQEDTPLY
PICRAWMNNEPQERKRPCLEPPSIPVPPTNDEEMEENCILDMPPADMPWKIIQNEKYKSP
RIPSPPTQCDDRLEMYIQKPDLEPAAEDLLLAHLSRWKNIRSSWCKKAMENEKRYESGMK
LLREMANKNLYTSVTSPFLINYEIVTVELVEIFERDYERV

Nucleotide sequence

Length: 1,513

>Moocci.CG.ELv1_2.S409139.g12189.02.t
AAGGTCTATAATACTAAAATACTTCAAACTACTTCAAAAAATGGACTTAAAGCAGTTAAT
TGCCACTGCTGATTTTGCTGCTCGGAAACACAAGGATCAGAGGAGGAAGGACTCCAATAA
AACACCCTACATAAATCATCCCATTGACAATTTTCTCAGAAAGCTGAACATTAAATATTT
AGGTGTAGCCAACATTCTTGCAGAAGAAGGGAACGTGCATGAGTTGGTTGTTCTGCAAGC
TGCACTTCTTCATGACACTGTTGAAGACACAGACACAACCATAGAAGAAATTGAGGAAAA
ATTTGGCCCCATAGTAAGGAAAATAGTTGCTGAAGTAACAGATGACAAATCTTTGCCAAA
GATGGAAAGAAAAAGACTCCAAATTGTGAATGCACCAAACAAATCCTCACATGCAAAACT
TGTGAAACTTGCTGATAAGTTATACAATTTGCGGGATTTAACAAAGGAAATGCCTGAAGG
ATGGACAGAAGAACGTGTGAATGAATATTTTATTTGGGCGCATAAAGTTGTAGCTGGTTT
AAGAGGAACAAACAGTGTCATTGAAGAAAAACTTGATGAAATATTTCGATCCAAAAACCT
AAATGCGCGTTCTAATTTGGATGATGTTTTAAGGGAAATTGTGGAAGAAGCAAAAGTAGA
GGACAGCTCTCCTACTAAAGATAGTGATGACACCGATACACAAAGCTCACAAGATGGAAG
AATTCAAAGAGATGTTAAGGGGACACTTTCAGACTTAGATACACCCAAAAAGACACTTTC
AGACTTTGATACACCCAAAAAACTGGCTCACAAAATATCAAGAAAAAGAAAGAAAAAAGA
AGAATTTAAAGAAGATAAAAATAAACCAAATGCATGTATAATGAAGCTGTTTGATCGGCA
AGTAGACCTTGCATTGTTTCAAGAAGATACACCGCTTTATCCAATATGTCGTGCATGGAT
GAACAATGAACCACAGGAGAGAAAGCGACCTTGCCTGGAACCTCCAAGCATTCCTGTCCC
TCCCACAAATGATGAAGAGATGGAAGAAAATTGTATCTTAGATATGCCGCCTGCTGATAT
GCCTTGGAAAATAATCCAAAACGAAAAATATAAAAGTCCGAGGATCCCTTCTCCTCCCAC
ACAATGTGATGATAGGCTAGAAATGTACATTCAGAAACCGGATCTTGAGCCAGCAGCTGA
AGATCTGTTACTTGCGCATTTATCACGATGGAAGAATATAAGAAGCAGTTGGTGTAAAAA
GGCAATGGAGAATGAAAAGCGTTATGAATCAGGAATGAAGTTGCTGCGGGAAATGGCAAA
CAAAAACCTTTATACTAGTGTGACCAGTCCGTTTTTGATAAATTACGAAATCGTAACGGT
TGAGCTGGTGGAGATCTTCGAGCGTGATTATGAACGTGTCTGAACCTGTTTATACAGTCA
AAGCGATTGAATTTACTTGCTTTTTTATGAAAATCTCAGAATAAAATATATTTATTTATG
TTTATATCAAAAA

InterProScan

Pfam
HD/PDEase_dom (IPR003607) - T[11-148] 8.4E-14
CDD
HD/PDEase_dom (IPR003607) - T[47-157] 3.1012E-5
Pfam
LIN37 (IPR028226) - T[271-422] 4.6E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MESH1_HUMAN 60.87 % 227 7.18E-73
LIN37_HUMAN 30.522 % 87.8 1.31E-19