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  1. Transcript 'Moocci.CG.ELv1_2.S39...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S39813.g00462.01.t

Possible name(s)

RPUSD1; RPUSD3; RPUSD4

Gene model

Moocci.CG.ELv1_2.S39813.g00462

Location

S39813 [25,481 / 29,413]

Sequences

Amino acid sequence

Length: 479

>Moocci.CG.ELv1_2.S39813.g00462.01.p
MLRKTIFNKNVGMCKTIISQRCVRRKPSFLTSLQKEMKDSTQTSKEPSVPKSIKVIPVPD
ENFKTEVTGPLSFESLETDEEKNSVKAIDIVQEIRQEKRQKNQQQNHNNEEKVELSEIKQ
NIAQFNVVNFKHKSNTEIAKILRKNVIYSHKTLVVLNKPYGIAVHGGDGITQNIKSCLPI
LSKMIYGPSTNVPLLLCNRLDKATTGILLLAANKDLAEIIVKAFRQQRVLKKYWAVVVGR
PEPNSGIIDIPLNEESIMGKDTKVHKRMSVAPYNRMDEDSGDYVKVKPFKSMTATTSYRT
LDSNDGLSLVELQPLSNVKHQLRVHMAEGLNCPILGDHKFSNERKLAPQRLGMKIRKKFG
LPQSKVRYVPLHLQLREVIIPGVFTMNDKPNLHVGSKYSSHFYYTLKKFRLSPGTPTEWQ
YFKHSNQWKEEKDTNKLFIDPTADQSKVEEEKRKQSWQSIADNSVKVFKPRNFVKYKHD

Nucleotide sequence

Length: 1,689

>Moocci.CG.ELv1_2.S39813.g00462.01.t
ATGTTACGTAAAACTATTTTTAATAAAAATGTTGGGATGTGTAAAACAATTATTTCGCAA
CGTTGCGTCAGAAGAAAACCTTCATTTTTAACATCTCTTCAAAAAGAAATGAAAGATTCT
ACACAAACAAGTAAAGAACCATCAGTACCCAAATCCATTAAAGTGATTCCAGTTCCTGAT
GAAAATTTTAAAACAGAAGTTACAGGGCCACTTAGTTTTGAAAGCTTAGAAACTGATGAA
GAAAAGAACAGTGTGAAAGCAATTGACATTGTTCAAGAAATACGGCAAGAAAAAAGACAA
AAAAATCAACAACAAAACCATAATAATGAAGAAAAAGTAGAGTTATCCGAAATTAAACAA
AACATAGCCCAATTTAATGTGGTCAATTTTAAACATAAATCTAATACAGAAATAGCAAAA
ATATTACGGAAAAATGTAATATACTCCCACAAAACATTGGTTGTTTTAAATAAGCCATAT
GGTATTGCAGTTCATGGTGGAGATGGAATAACCCAAAACATCAAGTCATGCTTGCCCATT
CTTTCCAAGATGATATACGGTCCAAGTACTAACGTTCCGTTGTTGCTTTGTAATCGTCTT
GACAAAGCCACAACAGGAATCCTATTGCTCGCAGCTAATAAGGATTTGGCAGAAATTATT
GTCAAAGCTTTTAGACAACAAAGAGTATTAAAGAAATACTGGGCAGTAGTTGTAGGACGT
CCTGAACCAAACAGTGGAATAATTGATATTCCTCTTAACGAAGAAAGCATCATGGGCAAA
GATACCAAAGTTCACAAACGGATGTCCGTAGCCCCATACAACAGAATGGATGAAGACAGT
GGCGACTATGTAAAGGTGAAGCCATTCAAATCAATGACCGCTACAACATCTTATCGAACG
CTGGATAGCAACGATGGATTATCCCTTGTAGAATTGCAACCTCTAAGCAATGTAAAACAC
CAGTTACGTGTACATATGGCCGAAGGGTTAAACTGTCCAATACTTGGGGATCACAAGTTT
TCCAACGAAAGAAAATTGGCCCCCCAACGATTGGGAATGAAAATTAGAAAGAAGTTCGGT
CTGCCGCAATCAAAAGTTCGTTATGTACCACTGCATTTACAATTGCGAGAAGTTATTATT
CCAGGCGTTTTTACAATGAATGACAAACCGAACCTGCATGTGGGGTCGAAATACTCAAGC
CATTTTTACTACACATTAAAAAAGTTTCGTTTGTCGCCTGGGACTCCTACAGAATGGCAA
TACTTCAAACACTCCAACCAATGGAAAGAGGAGAAAGACACTAACAAACTTTTTATCGAC
CCAACTGCTGACCAAAGCAAGGTTGAAGAAGAAAAAAGAAAACAATCATGGCAATCGATA
GCTGATAATAGCGTTAAAGTTTTTAAACCAAGGAATTTTGTAAAATACAAACACGATTGA
TAAAAATGTATTTTATAAAAACTGTATTTGTCATATTATATTATTTTATATTAATGACCA
GTAGGGATAAATAAAACTATGAAGTACATTATTTTTAAATTCTACATTTTATTATGGGGA
CTTATTGCAATCTAGCACCACTATCTTAAAAGCCTAAAAGTACATAAACTTTCATTTCTG
CTAAGCTAGTATTTTGCTTAATGCTTAGTTGCTTTACTGATAACTTAAAAATAAAACCAC
ATGATATTC

InterProScan

SUPERFAMILY
PsdUridine_synth_cat_dom_sf (IPR020103) - T[139-354] 1.57E-39
CDD
PsdUridine_synth_RsuA/RluD (IPR006145) - T[153-353] 4.60498E-45
Pfam
PsdUridine_synth_RsuA/RluD (IPR006145) - T[153-327] 6.6E-28
ProSitePatterns
PsdUridine_synth_RluC/D_CS (IPR006224) - T[197-211] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RUSD4_HUMAN 40.367 % 251 1.87E-79