- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Clone 'cien84376' >
- Transcript 'Moocul.CG.ELv1_2.S57...' >
- Transcript 'Moocci.CG.ELv1_2.S39...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S397296.g11640.01.t
Possible name(s)
ITGB1; ITGB3; ITGB7
Gene model
Location
S397296 [1,574 / 12,968]
Amino acid sequence
Length: 817
>Moocci.CG.ELv1_2.S397296.g11640.01.p
MESPAREKLSGRGRRSYTLHLRNKMINLNKIFLCAIISLIFNIVLGAENQCESSGAKSCS
ECMAIAGCGWCEDPEYANNPNLIIPRCNLPEILLKEKCPLEKIINPSSTINATLDKGHSN
VGESAIGKATQLKPQQYEAVLRPGMPVDVKISYKQAEDYPVDLYYLLDLSYSMKDDLQKL
RKLGKELGESMSAITRDFRLGFGSFVDKTVMPYISTVPSKLKNPCNSLDPCTPAYSFSND
LPLTANLDDFVSSVNNVSYSSNLDSPEGGFDAMMQAIVCKPQVNWRQDATHLLVYSTDAV
FHYAGDGKLGGIVEPNDGNCYLRSGKYYMANEMDYPSVGHLVQKISENNIQPVFAVTSTV
IDTYKQLQKMIPKSAVGELSGDSSNVIDLIQKAYNDLKGQVVLKVTPPEGVEITSKTSVC
KSGVVPDTLMCDGVQIGDVVNFTVGISTTKCFDEPIEMNISIVGYNEKVKVIIKSDCNCE
CSAVEPTVARNCSGNGVFECGTCVCKPGFLGLDCSCDKKDIVGVESYLQNCTQPETDVIC
SNRGECLCGLCVCTQPNDRKIYGRYCQCDDASCDRVDGKICNSHGECDCGKCLCDEGWKG
RDCGCTKDETTCINPEIPDSKPCGGAGVCECGNCKCNVTKSGLEYRGTYCEISPSQLCEI
HKECVLCIAYGSGNQTTCESHCVNYEVDELEKGKTSQLRSTCRVVDKSNDCSVTFYFEKQ
GDMVLVETDVSTKVCPKYTNPLFIIIGIIAAIVGIGLAILLIWKLYTSVKDSHEYKQWEK
EVQQAKWEASENPIYKAATSTHHNPIYKAGNKPTSQL
Nucleotide sequence
Length: 3,319
>Moocci.CG.ELv1_2.S397296.g11640.01.t
ATGGAATCTCCCGCTAGGGAGAAATTGTCTGGGCGAGGCAGGAGAAGTTACACGCTACAT
TTACGAAACAAAATGATAAATTTAAATAAAATATTTTTATGTGCAATAATATCTTTAATA
TTCAACATAGTACTAGGTGCTGAAAATCAATGTGAATCTAGTGGGGCCAAATCTTGTTCA
GAATGCATGGCCATAGCAGGCTGTGGGTGGTGTGAGGACCCAGAATATGCAAACAATCCC
AACTTAATCATTCCCCGATGCAATCTTCCAGAAATACTTCTAAAAGAAAAATGTCCTTTG
GAGAAAATTATTAATCCCTCATCCACTATAAATGCAACACTGGACAAAGGACATTCCAAT
GTTGGTGAATCTGCAATAGGAAAAGCCACACAACTAAAGCCTCAACAGTACGAGGCTGTT
TTAAGGCCAGGAATGCCTGTGGATGTTAAAATATCGTACAAGCAAGCAGAGGATTACCCT
GTTGATTTGTACTACCTGCTTGATTTGTCGTATTCGATGAAAGATGATTTACAAAAATTA
AGAAAATTGGGTAAAGAATTGGGCGAAAGCATGTCAGCAATTACGAGAGATTTTCGACTA
GGGTTTGGGTCCTTTGTTGACAAAACTGTTATGCCATATATATCAACAGTTCCTTCAAAG
TTGAAAAATCCATGCAACAGTTTAGACCCATGTACCCCAGCTTATAGTTTCAGTAATGAT
CTGCCACTAACAGCAAACCTGGATGATTTTGTATCGTCTGTTAATAACGTATCATATTCG
TCCAATTTGGATTCACCAGAAGGTGGTTTTGATGCAATGATGCAGGCCATTGTATGTAAG
CCTCAAGTTAATTGGAGACAAGATGCTACTCATCTTCTTGTGTATTCAACGGATGCTGTT
TTTCACTATGCAGGGGACGGTAAACTTGGAGGAATTGTAGAACCCAATGATGGAAATTGC
TATCTGCGGTCAGGAAAATATTATATGGCCAACGAAATGGATTACCCATCAGTTGGTCAC
TTGGTCCAGAAGATCTCAGAAAACAACATTCAGCCAGTGTTTGCTGTCACCTCAACTGTG
ATTGATACCTATAAGCAATTGCAAAAGATGATACCAAAATCAGCAGTTGGTGAACTAAGT
GGTGATTCTTCTAATGTTATAGATTTAATTCAGAAAGCCTATAATGATCTCAAAGGACAG
GTGGTTCTTAAAGTGACTCCACCAGAAGGGGTTGAAATAACAAGCAAAACTTCAGTTTGT
AAAAGTGGGGTTGTTCCAGACACACTGATGTGTGATGGGGTACAAATTGGAGATGTGGTT
AATTTCACCGTTGGAATATCAACTACAAAATGTTTTGATGAACCAATAGAAATGAATATT
TCAATTGTTGGTTACAATGAAAAGGTTAAAGTCATAATTAAATCAGACTGCAATTGTGAA
TGCTCTGCTGTTGAACCTACTGTAGCTCGAAATTGTAGTGGCAACGGTGTTTTCGAATGT
GGAACTTGTGTTTGTAAGCCAGGGTTTTTGGGATTGGACTGTTCGTGTGATAAAAAAGAT
ATAGTTGGTGTTGAATCATATTTACAAAATTGTACACAACCTGAAACTGATGTAATTTGT
AGCAATCGGGGAGAATGTCTATGTGGTCTTTGTGTGTGCACGCAACCAAATGACAGAAAA
ATTTATGGCCGATATTGCCAGTGTGATGATGCTTCCTGTGATAGAGTCGACGGGAAAATA
TGTAACAGTCATGGTGAATGTGACTGTGGAAAATGTTTATGTGATGAGGGTTGGAAGGGC
AGAGATTGTGGTTGCACTAAAGATGAGACAACATGTATAAACCCAGAAATTCCCGATAGT
AAACCTTGTGGAGGGGCCGGTGTGTGTGAATGTGGCAATTGCAAGTGCAATGTTACAAAA
AGTGGCCTTGAATACCGTGGAACATATTGTGAAATTTCACCTTCTCAACTTTGTGAAATT
CATAAAGAGTGTGTTCTCTGTATTGCATATGGTTCTGGAAACCAAACAACTTGTGAAAGT
CACTGTGTAAATTATGAAGTTGATGAGCTTGAGAAAGGTAAAACATCTCAACTGAGGAGT
ACATGTAGAGTAGTGGACAAATCGAACGATTGCTCTGTTACATTTTATTTTGAAAAACAA
GGAGACATGGTTTTAGTTGAAACTGATGTTTCAACAAAAGTTTGTCCAAAATACACAAAT
CCATTATTTATAATTATTGGAATAATAGCAGCAATAGTAGGGATTGGTCTTGCAATACTT
TTGATATGGAAATTGTACACATCTGTTAAAGATTCACATGAATATAAGCAGTGGGAAAAA
GAAGTTCAACAAGCAAAATGGGAAGCGAGCGAAAACCCAATCTACAAAGCTGCTACTTCA
ACACATCATAATCCAATTTATAAAGCAGGAAACAAGCCAACTTCTCAATTATGATAAATT
AATATATTACACAATTAAGTTTCCAACTTCAAGTGTTATTGCCAATTTGGTGAAAAATAC
TGAACATTTTTTGAATTTCTCTCCCGATTGGAACACCCTGCGGTAAAGCGACCAACAAAA
CTTCTTTTACAAACAACGAACACAAGTGTATGAGATCAATAAAATACGCTGTTTTAGAAA
TTTTAATGAATTAAGTTTTACGAATGTTTCTGTATTGTTATTATGTTTTTAGAAATATTA
AGATGTTCAGTAACGTTAATTCTCTTATTTTAAATTGAAATTATTTTTAATTAAATGATA
GCTTTATTTAATTATTATTTTTATGTTAAATGCTAGGAAGGAATATTAAGTCTTACAAAT
ATTATAATTTAACAAAAGTTTGTATGAATTTTTTCACATGAAATTATATAACTGCAATAA
TTTTTTGGTGAATAATCATTAACATGCATTATATTTTAACGCTGTTCATATATAAAATGA
AATAATGTTTTCTTTGTATTTAATATCTATGTGCACACATTTTAATCTGCTGTTTTTATT
GTCAATGGCATAAATATAAAATGGTACTTTTTTTACAATATTAAGAATATTTTGTATTTT
TTGTTTTACTTTTTGCAAAATACCCTGACAAAGTGTTTGCTATCATAATATGATTTAAAT
ATCAGTTTTAGCTCCAATTAGAAGTAGCTCATTGTTAAACTTAACAAAAAAGTTCATAAA
AAACAAAGGTCACCTAAAAAATTAAAAACAACTTAATATCAAATGAAATGTCGTAGAATA
ACAATGTCCCAAAATATTGCTGCACTGATTGCCCTAACTACTCAGTTGTATAGTCAAGAT
ATAATGAAAAAACTTAGGA
| PIRSF |
Integrin_bsu (IPR015812) - T[23-811] 3.9E-253 |
| PANTHER |
Integrin_bsu (IPR015812) - T[44-811] 1.3E-240 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[58-479] 2.1E-191 |
| PRINTS |
Integrin_bsu (IPR015812) - T[87-106] 7.7E-106 - T[131-144] 7.7E-106 - T[159-177] 7.7E-106 - T[199-218] 7.7E-106 - T[231-250] 7.7E-106 - T[264-286] 7.7E-106 - T[291-306] 7.7E-106 - T[334-357] 7.7E-106 - T[370-394] 7.7E-106 - T[540-553] 7.7E-106 - T[739-756] 7.7E-106 - T[756-774] 7.7E-106 - T[791-801] 7.7E-106 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[156-400] 3.2E-108 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[156-398] 3.95E-81 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[158-398] 3.7E-140 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[403-483] 6.8E-12 |
| Pfam |
EGF_extracell (IPR013111) - T[573-603] 4.4E-5 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[623-636] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[657-737] 9.42E-7 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[658-740] 8.0E-11 |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[764-810] 1.4E-17 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[764-808] 2.7E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 39.49 % | 538 | 1.42E-180 |
| ITB3_HUMAN | 40.103 % | 537 | 1.65E-180 |
| ITB1_HUMAN | 43.441 % | 579 | 0 |