- Transcript 'Moocci.CG.ELv1_2.S36...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S367966.g10289.01.t
Possible name(s)
SDHB
Gene model
Location
S367966 [9,427 / 12,014]
Amino acid sequence
Length: 278
>Moocci.CG.ELv1_2.S367966.g10289.01.p
MAFRISRTVLRRPDQIMPLALQGASRSTATAAATKEQEAPRLKKFSIYRYDPESTAQPKM
ETFEVNLNECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACLAKID
ENVKKTTKIYPLPHMYVVKDLVPDMNNFYAQYRSIEPFLKQKDESKKGVENFQSVEDREK
LDGLYECILCACCSTSCPSYWWAPNRYLGPAVLMQAYRWITDSRDEFTSERLDKLNDAYS
VYKCHTIMNCTEACPKGLNPGLAIGEIKKKLATHKSAS
Nucleotide sequence
Length: 1,227
>Moocci.CG.ELv1_2.S367966.g10289.01.t
ATTTATTTTATTCAACAGATATTCAAGCTTACTTTGTATCTATTTATTTAAAAAAATGGC
GTTCAGGATTTCTCGTACAGTGCTGCGAAGACCTGACCAAATTATGCCTCTAGCCCTTCA
AGGTGCTTCAAGATCCACTGCAACTGCAGCTGCAACAAAAGAACAAGAAGCTCCAAGACT
TAAAAAATTTTCAATCTATAGATATGATCCTGAAAGTACAGCACAACCAAAAATGGAAAC
ATTTGAGGTTAACTTAAACGAATGTGGTCCAATGGTCTTAGATGCTCTGATTAAAATAAA
AAATGAAATCGATCCAACTTTAACATTTCGAAGGTCTTGCAGAGAAGGAATTTGTGGATC
ATGTTCTATGAATATTGGTGGTGTCAACACCTTGGCTTGTCTTGCAAAAATTGATGAAAA
TGTGAAAAAAACGACAAAGATTTATCCACTTCCGCACATGTATGTTGTTAAGGATTTAGT
TCCTGATATGAACAACTTTTATGCTCAATATCGTTCCATTGAACCATTTTTAAAGCAGAA
AGATGAAAGCAAAAAGGGGGTTGAAAATTTTCAATCAGTTGAAGACAGAGAGAAGCTAGA
TGGTTTATATGAATGCATTCTATGTGCATGTTGCTCCACGTCCTGCCCTAGTTATTGGTG
GGCGCCAAATAGGTATCTTGGACCTGCTGTACTTATGCAAGCATACCGGTGGATCACTGA
TAGCAGAGATGAATTTACAAGTGAACGGCTTGATAAGCTAAATGATGCATATTCTGTGTA
CAAATGTCACACAATTATGAATTGCACTGAAGCTTGTCCCAAAGGTCTTAATCCCGGCTT
GGCTATTGGTGAAATTAAAAAGAAATTGGCTACTCACAAATCTGCATCATAAAAATTTGC
GTTTGATTTGCATGGTTTATTTTATTCACTTTAAATATTGGAAATTAATTATTCTAAGTA
ACTTATTGTAATTATGCATATGAAATATATATTTAGTACGTTGGTGAAGAAGTATTGTAA
CACAATTTATTTTGTGCACCATAACTTTAGTCCAACACAGTTGCTTTGCTTCTTATTATT
CACTTAAACTTTTTGAGTTTTTAATTGAAAACCTTTAAAAACACAAAATGCATAATAAAA
TAACAAGTCAAACTAAAATTTAAAAAAAAAATCAGAATTTAAGCTTAAATAAAATTTTAT
AAATATATACAAATTCAAAAGTTTCAA
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[31-144] 1.4E-47 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[42-144] 3.53E-30 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[43-135] 9.874 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[44-149] 5.6E-32 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[47-268] 1.4E-84 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[55-124] 0.00202935 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[95-103] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[145-278] 1.5E-59 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[145-272] 1.08E-35 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[177-207] 7.567 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[187-198] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 68.345 % | 402 | 8.17E-143 |
