- Transcript 'Moocci.CG.ELv1_2.S35...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S359560.g09884.01.t
Possible name(s)
CHRD; CHRDL1; CHRDL2
Gene model
Location
S359560 [4,049 / 11,858]
Amino acid sequence
Length: 924
>Moocci.CG.ELv1_2.S359560.g09884.01.p
MNIYSVLFIIPVFFNYAVGFFPLFSRQKTSSTAKSEGCWFGNNLHEVGLSWHPNLGPPFG
VMHCIRCYCVQDNERHKKSSPKVKCHDIRKNCPKLSCKFPKIEKGECCHSCPETIIIDKE
KSKQEADIDKTYNDESVNQQKNNNGDAKYFISLLTSNDKKESTGLSRVNFNLIGPNLYFN
LQNSKTSSQLRSIELIIDSDNEVVHFYNASNGNDSANNVLCGVWKNLSKKIIQMLENGKI
SVRAIFENEIQVGKISSHRALSAETFNALLTANLPGFEKYKASAVVLISFGRNFKNINFV
LLYNYRKLYGDAQEISKNVYFKLDLLNEDNEVLRFTEALVHKAEGDYANVWPASSEVLKW
FGRGILKIRLTLKLSGVHDSALTISGYIKPRATCGALQTILSGSSCKKAVLSGGGGLAQF
VINQDNTVDYHVQVDSGSKTPITSVMLNGLYRKKRSKVIADLSPQLNSGVAEGKLEGLGG
KEIHILLHHNAYVTASTSLSTECYLSGDVEYKQEKFTANGISGFKDEQVTALLEPATNDI
ATIKLENFDDNKAQGVLTDLNDEIYLQLNSGKITIKIATKKNPGGEISSEIHLQNNCAKK
SKVIPNVFKSDETTMFNAASDQKSTQSEQLFSFPKQFINSDSKGCHFEGTWYNEGARWSP
EYDLTCTECQCKYGSVICEPVVCPVLNCERPVIVEDSCCPICQSTFPGEKETDDDFPLFL
AAPVLIPPSLTKKTQEIKHVNEKEGCYDENDKTIYHPRGSTWNPVVKPFGIVRCVTCTCN
YDDETICEKIQCPPTNCKFPIKRDPSECCKVCPVNQPQMEKLTYENTRRLEKPTSMNLQR
FMLQDGADNMCHFGRKVYALGETWKPDVIRRGKLSCVNCSCELDRKNGIRYKCRKTCPKI
PKDCADVVKTYKDCCSKCISRKTQ
Nucleotide sequence
Length: 2,887
>Moocci.CG.ELv1_2.S359560.g09884.01.t
ATGAATATCTACTCGGTATTGTTTATTATACCTGTATTTTTCAACTACGCCGTCGGATTT
TTCCCACTTTTCTCGCGACAAAAGACATCTTCAACTGCCAAATCCGAAGGCTGCTGGTTC
GGTAACAACTTACACGAAGTCGGCTTATCATGGCATCCGAACCTTGGTCCACCATTCGGC
GTCATGCATTGCATACGATGCTATTGCGTACAGGATAATGAAAGACATAAAAAATCAAGC
CCAAAAGTGAAATGCCATGACATTAGAAAAAACTGCCCAAAATTATCCTGCAAATTTCCG
AAAATTGAAAAGGGGGAATGTTGTCATTCTTGCCCAGAAACAATCATCATCGATAAAGAA
AAATCAAAACAGGAAGCGGATATTGATAAAACTTATAATGATGAAAGCGTGAATCAGCAA
AAAAATAACAATGGCGACGCTAAATACTTTATTTCACTTTTGACTTCAAATGACAAAAAA
GAATCAACTGGTCTTTCGCGTGTTAACTTTAACTTGATTGGACCAAACTTATATTTCAAT
TTACAGAACTCCAAAACATCATCTCAACTAAGAAGCATCGAATTAATCATCGATTCTGAT
AACGAAGTCGTTCACTTTTACAACGCATCTAACGGAAACGATAGCGCGAATAATGTTCTT
TGCGGGGTGTGGAAAAACTTATCGAAAAAAATTATCCAGATGCTAGAAAACGGCAAGATA
TCCGTAAGAGCAATTTTTGAAAACGAAATCCAAGTAGGAAAAATTTCGTCTCATCGGGCT
CTATCGGCCGAAACTTTCAATGCTTTGCTGACAGCCAACTTGCCAGGTTTTGAAAAATAC
AAAGCGTCAGCTGTTGTGCTTATATCGTTTGGCAGAAATTTCAAGAACATCAACTTTGTA
TTGTTGTATAATTACAGAAAACTTTACGGCGATGCACAAGAAATTTCTAAAAACGTATAC
TTCAAACTTGACCTCCTAAACGAAGACAACGAGGTTCTACGTTTTACCGAAGCTTTGGTG
CATAAAGCGGAAGGAGATTACGCCAACGTGTGGCCAGCAAGTTCTGAAGTACTGAAGTGG
TTTGGGAGAGGAATTCTAAAGATACGATTGACACTAAAGCTTTCTGGGGTTCATGACTCT
GCCCTCACAATTTCTGGCTATATCAAACCTCGTGCGACATGTGGCGCTCTGCAAACGATT
TTATCGGGTTCTTCATGCAAAAAGGCCGTCTTATCAGGAGGAGGGGGGTTGGCCCAGTTT
GTTATAAATCAAGACAATACTGTCGATTATCATGTACAAGTGGACAGTGGGTCAAAAACT
CCAATAACATCGGTCATGTTAAATGGACTGTACCGCAAAAAACGATCCAAGGTTATAGCT
GACCTTTCTCCACAGCTGAATTCAGGAGTAGCTGAAGGAAAATTGGAAGGGTTGGGCGGA
AAAGAGATCCACATTCTTTTACATCATAACGCGTACGTTACTGCTTCTACATCGTTGAGT
ACCGAGTGTTATCTATCTGGAGATGTGGAGTACAAACAAGAAAAGTTTACTGCAAACGGC
ATATCTGGATTCAAAGATGAGCAGGTGACAGCGCTTCTTGAACCCGCAACCAATGATATT
GCTACAATAAAGTTGGAAAATTTTGACGACAACAAGGCTCAGGGAGTTTTGACAGATTTA
AATGATGAAATTTATCTGCAATTAAATTCTGGAAAAATCACAATAAAGATCGCAACAAAA
AAGAACCCAGGTGGAGAAATTTCTAGTGAAATACACTTGCAGAATAACTGTGCTAAGAAA
AGCAAAGTTATACCCAATGTTTTTAAATCAGACGAGACCACGATGTTTAATGCTGCAAGT
GATCAAAAATCAACGCAATCCGAACAACTATTTTCTTTTCCCAAGCAGTTTATAAACAGT
GATTCAAAAGGTTGTCATTTTGAAGGAACTTGGTACAACGAAGGAGCCAGATGGTCACCG
GAATATGATTTAACATGCACAGAATGCCAATGCAAGTATGGAAGCGTAATATGCGAGCCA
GTTGTCTGCCCCGTGTTAAACTGTGAAAGACCGGTTATCGTGGAAGACTCTTGTTGCCCA
ATTTGCCAATCTACGTTTCCCGGCGAAAAAGAAACTGATGACGACTTTCCCTTGTTTTTA
GCCGCACCGGTATTAATCCCACCTTCCCTGACAAAGAAAACACAAGAGATTAAACACGTC
AATGAAAAAGAAGGTTGTTATGATGAAAACGACAAAACTATTTACCACCCAAGAGGGTCA
ACATGGAATCCTGTTGTCAAACCGTTTGGAATAGTTCGATGCGTTACTTGCACGTGTAAT
TATGACGATGAAACAATTTGCGAAAAAATCCAGTGTCCGCCTACTAATTGCAAATTTCCA
ATTAAACGCGACCCTTCAGAATGCTGCAAAGTTTGTCCAGTCAACCAACCCCAAATGGAA
AAATTAACCTACGAAAACACAAGACGTTTGGAAAAACCTACGTCAATGAATCTCCAACGG
TTTATGTTACAAGATGGGGCCGATAATATGTGTCATTTTGGAAGAAAAGTCTATGCATTG
GGTGAAACTTGGAAGCCTGACGTCATTCGTCGAGGAAAATTGAGTTGCGTTAATTGCTCA
TGCGAGTTGGACAGAAAAAATGGAATTCGTTACAAGTGTCGAAAAACCTGTCCTAAAATA
CCAAAAGATTGCGCCGACGTCGTAAAAACATATAAAGATTGTTGCAGTAAATGTATTTCT
AGAAAAACACAATAATATGTTATAATTTCCATAGAAACCAATTAAATATGTCTCTGACTT
TATTCTCGGTTTTTGTCGGTTTATGTCGTTCCGCCCTATAAGCACGTGGCAAATAAAAAA
CATGCTT
| PIRSF |
Chordin (IPR016353) - T[5-517] 9.2E-110 - T[514-924] 9.4E-90 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[36-112] 8.652 - T[643-703] 11.036 - T[744-813] 9.225 |
| SMART |
VWF_dom (IPR001007) - T[38-111] 0.082 - T[645-702] 2.1E-11 - T[746-812] 8.4E-5 - T[851-918] 0.023 |
| Pfam |
VWF_dom (IPR001007) - T[38-111] 1.9E-7 - T[645-702] 7.7E-10 - T[755-812] 4.0E-6 |
| ProSiteProfiles |
CHRD (IPR010895) - T[146-264] 11.183 - T[393-514] 8.497 |
| SMART |
CHRD (IPR010895) - T[395-511] 0.0051 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[666-702] . - T[774-812] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHRD_HUMAN | 26.246 % | 327 | 2.99E-97 |