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  1. Transcript 'Cisavi.CG.ENS81.R107...' > 
  2. Transcript 'Cisavi.CG.ENS81.R77....' > 
  3. Transcript 'Cisavi.CG.ENS81.R107...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Moocci.CG.ELv1_2.S34...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S349769.g09494.01.t

Possible name(s)

GAR1

Gene model

Moocci.CG.ELv1_2.S349769.g09494

Location

S349769 [11,242 / 12,440]

Sequences

Amino acid sequence

Length: 198

>Moocci.CG.ELv1_2.S349769.g09494.01.p
MSFRGRGGGRGGFRGGRGRGGGRGGFNRSFQSDEPPEQVVELGSFMHPCQEDVVCKCSNE
KVPYFNAPLYLENKSRIGKVDEIFGQIREFYFSIKLDDNMKATSFGKETKFYIDPMKLLP
LQRFLPGNNQKRGRGGGRGGRGRGGGGFRGGGRGGGRGGFRGGRGGGGRGGGGRGGGFRG
RGGGGRGRGGGRGSFRGR

Nucleotide sequence

Length: 597

>Moocci.CG.ELv1_2.S349769.g09494.01.t
ATGTCGTTTAGGGGTAGAGGAGGTGGAAGAGGAGGATTTCGTGGCGGTCGTGGAAGAGGA
GGAGGAAGGGGTGGTTTTAATAGAAGTTTTCAAAGTGATGAACCTCCGGAACAAGTTGTT
GAATTGGGTAGTTTCATGCACCCATGCCAAGAAGATGTTGTATGTAAATGCTCCAATGAA
AAGGTTCCATATTTTAATGCGCCACTGTATTTGGAAAACAAGTCAAGAATTGGCAAAGTT
GATGAAATATTTGGTCAAATTAGAGAGTTTTACTTTTCAATTAAACTTGACGATAACATG
AAAGCTACATCATTTGGAAAAGAAACTAAATTTTACATTGATCCAATGAAACTTCTTCCT
CTTCAGCGGTTTTTACCAGGAAATAACCAAAAACGGGGTAGAGGTGGTGGTAGAGGAGGT
CGTGGCCGTGGTGGGGGTGGTTTTAGAGGGGGTGGAAGAGGAGGGGGTCGTGGTGGCTTC
CGTGGAGGTAGAGGTGGAGGAGGCAGAGGTGGAGGAGGCAGAGGTGGTGGATTTAGGGGA
AGAGGGGGTGGTGGAAGAGGAAGGGGAGGTGGAAGAGGGTCATTTAGAGGAAGATGA

InterProScan

PANTHER
H/ACA_rnp_Gar1 (IPR021154) - T[2-197] 1.9E-59
Pfam
H/ACA_rnp_Gar1/Naf1 (IPR007504) - T[21-126] 3.5E-38
Gene3D
Gar1/Naf1_Cbf5-bd_sf (IPR038664) - T[35-126] 2.6E-44
SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[40-114] 6.71E-18
ProDom
H/ACA_rnp_Gar1 (IPR021154) - T[42-126] 5.0E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GAR1_HUMAN 66.412 % 149 1.35E-45