- Transcript 'Moocci.CG.ELv1_2.S26...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S269453.g06390.01.t
Possible name(s)
HOXA10; HOXC10; HOXD10
Gene model
Location
S269453 [4,722 / 5,549]
Amino acid sequence
Length: 228
>Moocci.CG.ELv1_2.S269453.g06390.01.p
MPKKANTQKNEAYTKVQVQYPTTLLSVESDPTRHWLTANGRKKRVPYTKFQLLELEKEFH
YNQYLTRERRLEVAKSVSLSDRQVKIWFQNRRMKWKKERKEEKMRDGMTIPPPPHLISSH
LRPQFPPASHYPAALAATMQQSYPLHNPFTSPTQAQGFSQHSVGSPPGVSSGTPHHFQPH
YQSHSSNTGYHDNVNQMAAAAAADFFTSFHHVPYSMSREPTLSLGMYN
Nucleotide sequence
Length: 687
>Moocci.CG.ELv1_2.S269453.g06390.01.t
ATGCCAAAAAAGGCAAACACACAAAAAAATGAAGCTTATACTAAAGTTCAGGTTCAATAC
CCAACTACGCTACTTTCTGTAGAATCCGATCCAACACGCCACTGGCTGACAGCTAACGGA
CGAAAGAAAAGGGTTCCTTACACGAAGTTTCAACTCTTGGAGTTGGAAAAAGAATTCCAT
TACAACCAGTATCTCACTCGGGAGCGCCGTTTAGAGGTTGCAAAATCTGTAAGTTTATCC
GATCGCCAAGTCAAGATATGGTTCCAAAATAGACGAATGAAATGGAAGAAAGAAAGAAAA
GAAGAAAAAATGAGAGATGGGATGACAATTCCTCCACCTCCGCATCTCATATCTTCGCAT
CTGCGCCCCCAATTTCCACCAGCTTCCCACTATCCTGCTGCTTTAGCAGCTACTATGCAG
CAGTCGTACCCCCTTCATAACCCCTTTACCTCACCCACCCAAGCCCAGGGATTTTCACAA
CACTCAGTTGGATCGCCACCTGGGGTTTCATCAGGGACTCCACATCATTTCCAACCGCAC
TATCAGTCCCACAGCTCCAACACTGGGTACCATGATAACGTCAACCAAATGGCCGCTGCT
GCCGCGGCTGATTTTTTCACGTCTTTCCATCACGTGCCATATTCCATGTCCCGTGAACCA
ACTTTGTCGCTTGGAATGTACAACTGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[27-100] 5.56E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[38-98] 21.443 |
| SMART |
Homeobox_dom (IPR001356) - T[40-102] 3.9E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[41-92] 4.55699E-21 |
| Pfam |
Homeobox_dom (IPR001356) - T[41-97] 6.5E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[62-73] 5.6E-8 - T[77-87] 5.6E-8 - T[87-96] 5.6E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[73-96] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD10_HUMAN | 64.13 % | 120 | 1.01E-32 |
| HXC10_HUMAN | 54.902 % | 116 | 3.71E-31 |
| HXA10_HUMAN | 70.27 % | 114 | 5.31E-30 |
