- Clone 'cijv007j02' >
- Clone 'cima8110413' >
- Transcript 'Moocci.CG.ELv1_2.S26...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S269005.g06375.01.t
Possible name(s)
PABPC4L; PABPC5; SART3
Gene model
Location
S269005 [2,496 / 9,950]
Amino acid sequence
Length: 836
>Moocci.CG.ELv1_2.S269005.g06375.01.p
MSFNFPLTEKLWLQWIEDFKKFSSNDTEGLDSLFEKAIKDYICPDIWFEYMQHSISWVSQ
ENGVDKIRKVMERGLTACGLHVTKGTQLWETYREFENVIATTLQPKPGSVATEEQQEAMK
KQTDRIHALFRRQLVVPLYNMEETMEEYEEWLGEEECSETLEDAHDNAIDKLEKLKEFEE
VLLNENESDHLQTYEAYLDLEISDGDPARIQCLFERSIADNCLNSDLWLKYTKYLDTHLK
GSPAILDVYARSVRNCPWVSKLWTNYMIALEADESKRDVLKDVLTKALKSGFSSLSEKVD
IWKLACDQARRRLRNCKNPADEDLLKEELRSVYKEATSYTSKVSKENKKETDDSYMRLWI
DWAYDEASCLSDLSKASDILESVIRDDPKVRRNPLMWVEFFQLENEFGKDNKIEKCRGIL
RRGVQRSAIDTSECTLVCKTLSLFERRFGTLDDIAESERRISDKMEQINRRREKQKAAEQ
SNSSRKKTTTKRGSTDDGPMIENKRSKYNEGQKSKKQPPANQGNSNKNNHAKKESPHKSN
TKSPISKKSTENKKSVPAPPPGFKINQNKPTEPEIKKGLKPENLTEKEEKCTVFVSNLDF
NIENVGEKLNEFFQQVGTVKDVRIITDYKGKFRGYVYIQFDNERSAKKALEIDRSNFEGR
PMFISPYVDKSKNPTAKVFKFQNKMEDHKLFVKNLPISLTEEETRGYFGAFGIIKALRIA
TNRSGESKGIAYIEYEDSKSAKEAVLKMDGKKIQDNEIFVAISNPPPRKPPQGDSSSRKH
FDNTPIGGRSHSRTQISFMPRSLNRSSQVSTKNGSIEKKDFKPMSNKDFASLLLKK
Nucleotide sequence
Length: 2,847
>Moocci.CG.ELv1_2.S269005.g06375.01.t
AGCAAACTTCCAACTTCCCATATGACTACAACTCTCATATTGCACTTATAACAGCATGTC
GTGAAGCAGAAGCTTACAATGATTTATCAGAAGCTTACAAAAATATGAGTTTTAATTTTC
CATTAACAGAAAAGCTATGGTTGCAATGGATTGAAGATTTCAAAAAGTTTTCAAGCAATG
ACACTGAAGGATTAGACAGTCTTTTTGAAAAAGCTATAAAAGATTACATTTGTCCAGACA
TTTGGTTTGAGTACATGCAGCATTCAATATCTTGGGTTTCACAAGAAAATGGGGTGGATA
AGATTCGTAAGGTGATGGAAAGAGGTCTTACAGCTTGTGGTCTGCATGTAACCAAAGGCA
CACAACTTTGGGAAACTTATCGTGAGTTTGAAAATGTAATAGCAACAACATTGCAACCAA
AACCTGGCTCAGTGGCAACAGAAGAACAGCAAGAAGCAATGAAGAAGCAAACAGACCGTA
TACATGCATTGTTTAGACGCCAGTTAGTGGTTCCATTATACAACATGGAGGAGACAATGG
AAGAATATGAGGAGTGGTTGGGGGAAGAAGAATGTAGTGAAACATTGGAGGATGCTCATG
ATAATGCTATTGATAAACTAGAAAAGTTGAAGGAATTTGAAGAGGTGCTTTTAAATGAAA
ATGAGAGCGATCACCTACAAACTTACGAAGCTTACCTTGATCTTGAAATATCAGATGGAG
ATCCCGCTAGGATACAATGTTTGTTTGAAAGATCAATTGCTGATAACTGTTTGAATTCTG
ACCTGTGGTTAAAATATACAAAGTACTTGGATACACATTTAAAGGGAAGTCCGGCTATAT
TGGATGTTTATGCAAGATCGGTGCGTAATTGCCCGTGGGTTTCCAAATTGTGGACAAATT
ATATGATTGCATTGGAGGCTGATGAATCGAAAAGAGATGTTCTAAAAGATGTACTTACGA
AAGCGTTAAAAAGTGGATTTTCATCACTAAGTGAAAAGGTGGACATTTGGAAATTAGCAT
GTGATCAAGCTCGAAGGCGTTTAAGAAATTGCAAAAATCCAGCTGATGAAGATTTATTGA
AAGAAGAATTAAGAAGCGTTTATAAAGAGGCGACTTCTTACACATCGAAAGTTTCCAAAG
AAAACAAAAAGGAGACGGATGATAGCTATATGCGATTATGGATTGACTGGGCATATGATG
AAGCGTCATGCCTAAGTGATTTGTCAAAGGCTTCTGACATCTTAGAGTCTGTAATCCGAG
ACGACCCAAAAGTTAGAAGAAATCCGTTAATGTGGGTGGAATTTTTTCAACTGGAGAATG
AATTTGGAAAAGATAATAAAATTGAAAAATGTAGGGGGATACTAAGACGTGGTGTACAAA
GAAGTGCAATTGATACAAGTGAATGTACTTTGGTTTGCAAAACATTGTCACTGTTTGAGA
GAAGATTTGGGACTCTTGATGACATTGCTGAGTCTGAGCGTAGAATAAGTGATAAGATGG
AGCAAATCAATAGAAGGCGGGAAAAACAAAAAGCAGCTGAACAATCAAATTCAAGTAGGA
AAAAGACAACAACTAAACGAGGATCTACTGATGATGGACCAATGATAGAAAATAAAAGAT
CAAAATATAATGAAGGACAAAAATCTAAAAAGCAACCACCAGCTAATCAAGGCAATTCGA
ATAAGAATAATCATGCTAAAAAGGAAAGTCCACATAAATCGAACACTAAATCTCCCATTT
CAAAAAAATCTACGGAAAATAAAAAGTCAGTTCCAGCACCACCACCTGGTTTTAAAATCA
ATCAAAATAAGCCAACAGAACCAGAAATTAAAAAAGGCCTGAAACCAGAAAATTTGACGG
AAAAAGAAGAAAAATGTACTGTCTTTGTAAGCAATTTGGACTTTAATATAGAAAATGTCG
GTGAAAAACTGAATGAATTTTTTCAACAAGTTGGAACTGTTAAGGATGTTAGAATTATTA
CGGATTATAAAGGAAAATTTCGTGGATACGTTTACATTCAATTTGACAATGAAAGGAGCG
CAAAAAAAGCTCTTGAAATTGACAGATCGAATTTTGAAGGTCGACCAATGTTTATTTCAC
CCTATGTGGACAAATCTAAAAACCCAACAGCAAAAGTATTTAAATTTCAGAATAAAATGG
AAGATCACAAACTGTTTGTTAAAAACTTACCAATTTCTTTAACTGAAGAAGAAACAAGAG
GTTATTTTGGTGCATTTGGTATCATAAAAGCTTTAAGAATTGCCACAAATAGATCTGGAG
AATCCAAAGGGATAGCTTACATTGAATATGAAGATTCAAAAAGTGCCAAAGAAGCTGTCC
TTAAAATGGATGGTAAAAAGATCCAAGATAATGAAATATTTGTTGCTATAAGCAACCCGC
CCCCTAGAAAACCTCCACAGGGAGATAGTTCCAGTAGAAAGCATTTTGATAACACACCAA
TAGGAGGAAGAAGTCATTCCAGGACTCAAATTAGTTTTATGCCAAGATCACTAAATCGCA
GCAGTCAAGTGTCTACAAAAAATGGTTCCATTGAAAAGAAAGACTTTAAACCAATGTCCA
ATAAAGATTTCGCTAGTTTATTACTTAAGAAATAAAATTGAATTTCTAATTTCAGTTAAA
TACAGCTGCTTACTTTTATCTTTTAATCTCTCCAATAGCACATTGTGATGCTAGAATAAA
ATTTTTATTGAAATGGGATGTTTGTTGTTATATCAGCTGAATTTTGCTATTTTATTTGAT
GACTGCCTGTTTTTGTATATTATTTTACTTTTACATTACATTCGATAAAACTTTATTTGT
ATGGGATATTGGTAATCCAAAGAATTA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-165] 2.6E-33 - T[184-495] 5.8E-38 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[4-468] 7.59E-43 |
| SMART |
HAT (IPR003107) - T[25-56] 13.0 - T[62-98] 0.82 - T[205-237] 0.63 - T[240-272] 160.0 - T[275-311] 510.0 - T[324-368] 820.0 - T[371-406] 260.0 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[581-670] 8.7E-20 - T[671-773] 2.5E-21 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[581-675] 7.39E-21 - T[685-781] 9.4E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[591-669] 16.227 - T[688-765] 17.592 |
| SMART |
RRM_dom (IPR000504) - T[592-665] 4.4E-17 - T[689-761] 2.7E-19 |
| Pfam |
RRM_dom (IPR000504) - T[593-661] 4.5E-13 - T[690-758] 2.0E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SART3_HUMAN | 36.69 % | 544 | 1.36E-180 |