- Clone 'csef039p18' >
- Transcript 'Moocci.CG.ELv1_2.S26...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S262076.g06132.01.t
Possible name(s)
EXOSC4; EXOSC6; SOD2
Gene model
Location
S262076 [27,314 / 29,732]
Amino acid sequence
Length: 465
>Moocci.CG.ELv1_2.S262076.g06132.01.p
MLSIAPICLRKAPTLGTSFLKNTILATNVVRKKHQTHQLPDLPYDYNALEPTISVEIMTL
HHKKHHATYVDNLNIAEEKMAEAVAKGDVSQQIALAPAIKFNGGGHLNHSIFWTNLCPGG
TGEPSGDLRTAIQRDFGSFDGLKSKLSAATVAVQGSGWGWLGYNASTGLLEVATCANQDP
LQATTSLIPLLGIDKNYKMNISDNRRVPVPDNSISPSVYDSTRSGDVIKANYKRKDRDLT
EHRPIYLRAGAISKAKGSAYVEVGNTKIICAVYGPHDFYRKNDFQMQGLLKCDFKFAPFS
CHNRRRHLPDSEEIEYSQILTQALEPAIHSRSFPKSQVDVFVTVLENDGNALSTAIIAAS
TALADAAIEMYDLVTSATVRIADNILIHDPSCKETYNSMNFNNQTGINHGNVTVAILPML
NQVSAVLTEGVIDPATVIQAVKMATESAQSIYPVVHKAVLDSVVT
Nucleotide sequence
Length: 1,556
>Moocci.CG.ELv1_2.S262076.g06132.01.t
ATGCTCTCAATTGCCCCAATATGTTTAAGAAAAGCACCAACACTCGGTACTTCTTTTCTC
AAGAATACAATACTGGCAACCAATGTGGTGCGCAAAAAGCATCAGACTCACCAGCTACCT
GATTTACCTTATGACTATAATGCCCTTGAACCAACAATATCAGTGGAAATCATGACTTTG
CATCATAAGAAGCACCATGCAACTTATGTTGATAACTTAAACATAGCTGAAGAAAAAATG
GCTGAAGCAGTTGCAAAAGGAGATGTTTCACAGCAAATTGCCTTGGCACCTGCTATAAAG
TTCAATGGAGGTGGTCATCTTAATCATTCTATTTTCTGGACAAATTTGTGCCCTGGTGGC
ACTGGTGAACCAAGTGGTGATCTAAGAACAGCAATACAACGCGACTTTGGCTCATTTGAT
GGATTAAAGAGCAAGTTAAGTGCTGCTACTGTTGCAGTGCAGGGGTCAGGGTGGGGCTGG
TTAGGCTATAATGCAAGTACAGGTCTTTTGGAAGTAGCTACCTGTGCAAATCAAGATCCG
TTGCAAGCTACAACTTCGTTGATACCATTACTAGGTATTGATAAAAATTATAAAATGAAT
ATTTCTGATAACAGAAGAGTACCTGTTCCTGATAATAGCATTTCACCATCCGTGTATGAT
AGCACAAGGTCTGGCGATGTTATTAAAGCAAACTACAAACGCAAAGACAGAGATTTAACT
GAACACCGTCCAATTTATTTGAGAGCTGGTGCTATAAGCAAGGCAAAAGGTTCAGCGTAT
GTTGAAGTTGGAAACACGAAGATTATCTGTGCTGTTTATGGTCCTCATGACTTTTACAGA
AAAAATGACTTTCAAATGCAAGGCTTGCTAAAATGTGATTTTAAATTTGCACCATTTTCA
TGCCACAATAGAAGAAGACATCTTCCTGATTCTGAGGAAATTGAGTACTCACAGATTTTG
ACACAAGCACTAGAACCAGCTATACACTCAAGGTCTTTCCCAAAATCCCAAGTGGATGTA
TTTGTAACTGTTCTTGAAAATGATGGAAATGCTTTGTCTACAGCTATTATTGCAGCATCT
ACCGCACTTGCTGATGCTGCTATTGAAATGTATGACCTTGTAACCTCAGCAACAGTGCGC
ATTGCTGATAATATATTAATTCATGATCCATCTTGCAAAGAAACATACAACAGTATGAAC
TTCAATAATCAAACTGGTATAAATCATGGTAATGTAACAGTTGCCATTTTGCCTATGTTA
AACCAGGTATCAGCTGTCTTAACAGAAGGTGTAATTGATCCAGCTACAGTTATACAAGCG
GTAAAAATGGCAACAGAATCTGCGCAATCTATATATCCAGTGGTTCATAAAGCCGTCTTG
GACAGTGTTGTAACATGAAAATTAAATAAATTTAAATGAACAAGAAAACAAACTGAAATA
CTGGTTCTACGGGCATTCAATGTAGTGAGCTGCTGATATTACATTTCGACTATCTTTATA
TTTATTCTAAAAAACTATTAGACTTATTTTTACATAAATAATTGGTTATAAAAACA
| SUPERFAMILY |
Mn/Fe_SOD_N_sf (IPR036324) - T[32-118] 1.22E-32 |
| Pfam |
Mn/Fe_SOD_N (IPR019831) - T[36-116] 1.4E-31 |
| PRINTS |
Mn/Fe_SOD (IPR001189) - T[40-51] 3.2E-19 - T[61-74] 3.2E-19 - T[100-113] 3.2E-19 - T[153-161] 3.2E-19 |
| Gene3D |
Mn/Fe_SOD_N_sf (IPR036324) - T[55-117] 1.9E-27 |
| Gene3D |
SOD_C_sf (IPR036314) - T[118-200] 1.9E-22 |
| SUPERFAMILY |
SOD_C_sf (IPR036314) - T[119-195] 1.83E-21 |
| Pfam |
Mn/Fe_SOD_C (IPR019832) - T[124-194] 1.2E-14 |
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[226-394] 1.47E-35 |
| Pfam |
ExoRNase_PH_dom1 (IPR001247) - T[241-369] 2.7E-33 |
| SUPERFAMILY |
ExoRNase_PH_dom2_sf (IPR036345) - T[370-464] 5.18E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOS4_HUMAN | 28.39 % | 104 | 1.47E-25 |
| EXOS6_HUMAN | 34.909 % | 134 | 2.65E-36 |
| SODM_HUMAN | 71.25 % | 254 | 6.14E-83 |
