Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,225

>Moocci.CG.ELv1_2.S251638.g05788.03.p
MGRSRNKYRNKNNSGNPSVPEASNVKLDENESKSLELKGLDDHNVLILPQKTKTKKSKPA
SMNEKPKRKLTKKQRRKLQQVLDRKEKKSKRGQLLEDLSKVQVKPSELAMMSSVAHLGTK
NSTLVQKLSKRPLPNDLMTEIEKLNSIRSSKKKKKQKLSETEQEHEDQQSDEISDQEDEE
MSEEECSANKNVKETESSSKYNESENGEINNNITTKNSNDPKHPKSDKTSGLNQENSNKN
VIHTEYVPVIRDDAIQEVRLQLPIIRMEQEIIEAVHHNPTVVLCGETGSGKTTQVPQFLY
EAGYAREGMIGVTEPRRVAAISMSHRVGKEMSLTSDIVSYQIRYEGNTTENTKIKFMTDG
VLLREVQKDFMLTKYSVVIIDEAHERSVYTDVLIGLLSRIVPLRHKKGKPLKLIIMSATL
RVQDFVENTKLFKVPPPLIKVEARQFPVTVHFNRTTPMTTKDGRPYIKEAYRKICKIHRT
LPAGGILVFVTGQHEVHSLCRMLRTTFPFSSLKKTHDDNKKVVEDGKNPDKMEQQTKNKE
ITKCLDFNKNKTFFILIFLTKRRSLNKYPVIKLAATFFMLQGCLCSEKKSDTVPKFRDSE
NAIPETSVLPDANKEKPSSLPTVNLDQYSITPGITVEENEDRNAENEDAPAGLSDDEEMV
SDSEIIDDEAFTPEIDQLNPLYVLPLYSLLAPFKQQKIFKSPPENTRLCIVSTNVAETSL
TIPGVKYVVDTGKVKKRVYDKVTGVSSFQVSWISRASADQRAGRAGRTSPGHTYRLYSSA
VFQDFPEYSVPEIASRPVADLVLQTLNLLVFFAVENSGKITDLGKAIASFPVHPRFGKML
ASASAEEYKDLLPYVITIVAALTVREVFDGSFELPETDEQKKEQSQKVVRLNHLKSLWGG
ASNESMRAMGDIMVLLGAVGSADYSAMMEIRRLRSQLINTINLLKGESNLFLDSKLEPPS
NKQIGLLRQIILSAFGDHVARKIPDAEINKSGDAAKIKKLKGGYYSLLVEDPVFIHPTSV
LSQGANLPEYVVFQEIIESTSGRAYMKDVVVVDQDWLHLVCPQHCIFSQPLAEPVPTFSN
TLGVVKCHVTATFGNLSWVLGSVEVEYPPGLNRYRWFANFLLDGQVIPSLKKWSSVLLSR
PETMVKSWAKFLEFELQPRTEVILQELVDKRVEDRTKLIQAWKTDKNCKIDFSVTSISRD
LLNSYKQWIPLSTHNELICNWPPPL

Nucleotide sequence

Length: 3,946

>Moocci.CG.ELv1_2.S251638.g05788.03.t
GTACTTTTTAGGTTGTAGAATAATATTTAACACTGTACCATGGGGAGATCTAGAAACAAA
TACAGAAATAAAAATAACTCAGGAAATCCTTCTGTACCCGAAGCCAGCAATGTAAAGCTT
GATGAAAATGAATCCAAAAGCCTTGAGCTGAAGGGATTGGATGATCATAATGTTCTTATT
CTGCCGCAGAAGACAAAAACTAAAAAATCAAAACCTGCATCCATGAATGAAAAACCGAAG
CGTAAATTAACAAAGAAACAAAGAAGGAAACTACAACAAGTTTTAGACAGAAAAGAGAAA
AAATCAAAGCGTGGACAATTACTTGAAGATCTTTCCAAAGTTCAAGTCAAACCTAGTGAA
TTAGCAATGATGTCAAGTGTTGCACATTTGGGTACAAAAAATTCAACTCTTGTTCAAAAA
TTGTCAAAACGCCCTTTGCCAAATGACTTGATGACTGAGATAGAAAAATTAAATAGTATT
CGATCAAGTAAAAAGAAAAAGAAGCAAAAACTAAGTGAAACTGAACAAGAACATGAAGAT
CAGCAATCTGATGAGATAAGTGATCAAGAAGATGAAGAAATGTCGGAAGAAGAATGCAGT
GCCAATAAAAATGTTAAAGAAACAGAAAGTTCCTCTAAATATAATGAATCAGAAAATGGA
GAAATTAACAACAACATAACAACTAAGAATTCAAATGATCCAAAGCACCCTAAAAGTGAC
AAAACATCTGGTCTGAACCAAGAAAATTCCAACAAAAATGTCATCCATACAGAATATGTC
CCTGTTATCAGAGATGATGCCATACAAGAAGTTCGTCTCCAGCTTCCTATAATCAGGATG
GAGCAAGAAATAATCGAAGCTGTTCATCATAATCCTACAGTTGTACTTTGCGGCGAAACA
GGGTCAGGAAAAACAACTCAAGTTCCACAGTTTTTATATGAAGCAGGTTATGCAAGGGAG
GGGATGATTGGTGTAACTGAACCAAGAAGAGTGGCGGCAATTAGTATGTCCCATCGAGTT
GGGAAAGAAATGTCGTTGACTTCAGATATTGTTTCCTACCAAATAAGATACGAGGGCAAT
ACAACCGAAAATACAAAGATAAAATTTATGACTGATGGAGTGCTGTTACGAGAAGTTCAG
AAGGATTTCATGCTGACAAAATATTCTGTCGTTATCATCGATGAAGCTCACGAAAGAAGT
GTTTATACAGATGTACTCATTGGGTTGTTATCAAGAATAGTTCCCTTAAGACATAAGAAA
GGAAAACCTCTTAAACTAATCATTATGTCAGCAACATTGCGAGTTCAAGATTTTGTGGAA
AACACAAAATTGTTTAAAGTTCCACCTCCCCTAATAAAGGTTGAGGCAAGACAGTTTCCT
GTTACTGTACATTTTAATCGAACAACGCCTATGACCACTAAAGATGGTAGACCTTACATA
AAAGAAGCTTATCGAAAGATTTGCAAGATTCATCGAACTTTACCAGCAGGTGGCATACTA
GTGTTTGTGACAGGCCAACATGAGGTACATTCGCTCTGCAGAATGCTAAGAACAACATTT
CCATTTTCAAGTTTGAAGAAAACACATGACGATAATAAAAAAGTAGTGGAGGATGGTAAA
AATCCTGACAAAATGGAGCAACAAACTAAAAACAAAGAAATTACAAAATGCCTTGATTTT
AACAAAAATAAAACCTTTTTTATTTTAATCTTTTTGACCAAAAGGAGATCCCTTAATAAA
TATCCAGTAATTAAGTTAGCAGCGACTTTTTTCATGTTACAGGGTTGTTTATGTTCAGAA
AAAAAGTCTGATACCGTGCCCAAATTCAGAGATTCTGAGAATGCTATACCAGAGACTTCA
GTGTTGCCGGATGCAAATAAAGAAAAACCTTCAAGTCTTCCTACAGTTAACTTGGACCAG
TATTCCATCACACCTGGCATTACTGTTGAGGAAAATGAAGATAGAAATGCTGAGAATGAG
GATGCTCCTGCTGGATTATCTGATGATGAAGAAATGGTCTCAGACTCCGAAATAATTGAT
GATGAGGCATTCACTCCAGAAATTGACCAATTGAATCCTTTATATGTCTTGCCGCTTTAC
TCTTTACTTGCGCCTTTTAAGCAACAGAAAATATTTAAAAGCCCACCTGAAAATACAAGA
TTATGCATCGTTTCCACAAATGTAGCTGAAACTTCACTTACGATACCCGGAGTTAAATAT
GTTGTGGATACTGGGAAGGTTAAAAAGCGGGTCTATGATAAGGTTACTGGAGTTTCCTCC
TTCCAAGTGTCTTGGATCTCACGAGCATCTGCAGATCAAAGAGCTGGAAGGGCTGGAAGA
ACATCCCCTGGTCACACTTATCGTTTATATTCTTCAGCTGTTTTTCAAGATTTTCCTGAA
TACAGTGTACCAGAAATAGCATCCAGACCAGTTGCAGATCTAGTATTACAGACTTTGAAC
TTACTTGTATTCTTTGCAGTTGAAAACAGTGGAAAAATCACAGACCTTGGTAAAGCAATA
GCAAGTTTTCCAGTTCATCCAAGATTTGGAAAAATGCTTGCTTCTGCCTCTGCTGAAGAG
TATAAAGATCTCCTTCCATATGTAATAACAATCGTGGCTGCTCTAACTGTAAGGGAAGTT
TTTGATGGGAGTTTTGAACTACCAGAAACTGACGAACAGAAAAAAGAACAAAGCCAAAAA
GTGGTACGTTTAAATCATTTAAAATCTCTTTGGGGAGGGGCAAGTAATGAAAGCATGCGG
GCAATGGGGGATATAATGGTGTTATTGGGTGCTGTTGGATCAGCTGATTATTCAGCGATG
ATGGAAATTCGGCGCCTACGATCACAGCTTATAAACACTATCAACTTACTAAAGGGAGAA
TCAAATTTATTTCTTGATTCGAAACTCGAACCTCCTTCAAACAAGCAGATAGGATTGCTA
CGACAAATAATACTTTCTGCATTCGGAGATCACGTCGCCAGGAAAATACCTGATGCTGAA
ATTAATAAATCTGGCGATGCAGCGAAAATTAAAAAGTTAAAAGGTGGATATTACAGTTTA
CTTGTTGAAGACCCAGTTTTTATACATCCTACTTCTGTACTGTCGCAAGGAGCCAATCTT
CCGGAGTATGTTGTGTTCCAAGAAATAATTGAGAGTACAAGTGGTCGGGCTTATATGAAA
GATGTAGTGGTAGTGGATCAAGATTGGCTTCATCTAGTTTGCCCCCAACATTGCATATTC
TCTCAACCCCTAGCTGAACCGGTACCTACCTTTTCCAACACTTTGGGAGTGGTAAAATGT
CATGTCACAGCTACATTTGGTAATTTATCTTGGGTGCTTGGTAGTGTTGAAGTTGAATAC
CCACCAGGGCTAAACAGGTACCGGTGGTTTGCGAATTTCCTGTTAGATGGTCAAGTTATC
CCTTCATTAAAAAAATGGTCGTCCGTTTTGCTTTCGAGACCAGAGACCATGGTCAAATCA
TGGGCTAAGTTCTTGGAATTCGAATTGCAACCACGGACAGAAGTGATTTTACAAGAGCTA
GTTGACAAACGAGTAGAAGATCGCACAAAATTAATTCAAGCGTGGAAAACTGATAAAAAT
TGTAAGATTGATTTTTCTGTCACTTCGATTAGCAGAGATTTGTTAAACTCTTATAAACAG
TGGATTCCATTGTCTACTCACAATGAACTTATTTGTAACTGGCCACCTCCATTATAACAG
GACAATAGATAATTGTGCATTGTGCATGAAAAAAGGTAACGTCAAAATGCATTCTACGTG
ATTGTTCAAACACAAAGTCTTTTTTGGAATCTCTCCCTTGTACACGATTGGGACTAACAG
CGTAAATATCAGTTGGAACATGCTCCTGAAATCGATAAATTTGTTTTTGTTTTTAAATAC
AAATACAGATATGGCCAATAAATTATTGTGTGTTATAATTGATAAA

InterProScan

SMART	Helicase_ATP-bd (IPR014001) - T[260-451] 3.1E-28
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[260-506] 1.06E-81 - T[674-869] 1.06E-81
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[268-424] 4.0E-10
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[272-438] 21.946
ProSitePatterns	DNA/RNA_helicase_DEAH_CS (IPR002464) - T[376-385] .
ProSiteProfiles	Helicase_C (IPR001650) - T[629-809] 11.719
SMART	Helicase_C (IPR001650) - T[669-769] 2.3E-14
Pfam	Helicase_C (IPR001650) - T[682-768] 1.2E-8
Pfam	Helicase-assoc_dom (IPR007502) - T[803-913] 2.3E-17
SMART	Helicase-assoc_dom (IPR007502) - T[804-916] 4.3E-10
Pfam	DUF1605 (IPR011709) - T[967-1063] 4.1E-15