- Transcript 'KH2012:KH.C2.252.v1....' >
- Transcript 'Boleac.CG.SB_v3.S123...' >
- Transcript 'KH2012:KH.C9.371.v1....' >
- Transcript 'KH2012:KH.C6.140.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S24...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S246039.g05578.01.t
Possible name(s)
STOM; STOML1; STOML3
Gene model
Location
S246039 [5,388 / 6,594]
Amino acid sequence
Length: 401
>Moocci.CG.ELv1_2.S246039.g05578.01.p
MSKYKYQPLVSSGTRNYTSVFSYSNGKESGQTFINDGKYEDFSLSLPTKIEEPRQAWLDC
FVTFLVKVFCLMVFVLTLPFSALFCFKLCHQFERIVLYRLGRLQSVKGPGVVFILPCIDS
WNKIDMRTKAFNIPPTRLRTTDGCIVSVGGVIHFRVQNPILMTSSIQDMNHAVREISQSV
MANFLCKKNINDIMNSRGKYNYDIQIDINTVTKDWGLEISRVELSQVNVEVTPNAKSPFP
QQQAGMGDNLSMETIAMMAQQFMSHKQKKETNTSGSTNTLAALPSKTVVSNATPDSLLEI
LGKSLNSDLVAKVNASYELTLDDINEIFFIDLTSGNGRCGKGKLGIEPDVHLGLSFLTLQ
KLLSGDIGAYDAYSSGELRVHGDKSKALELDKVVACFKANA
Nucleotide sequence
Length: 1,206
>Moocci.CG.ELv1_2.S246039.g05578.01.t
ATGAGTAAATATAAATACCAACCTCTAGTTTCTAGCGGTACAAGAAACTACACTTCTGTA
TTTTCATATTCAAATGGAAAGGAATCTGGACAAACTTTTATAAATGATGGAAAGTATGAA
GATTTTTCATTATCTCTACCTACAAAAATTGAAGAACCAAGGCAAGCATGGCTGGATTGT
TTTGTGACATTTTTAGTAAAAGTTTTCTGTTTAATGGTGTTTGTATTGACTTTACCTTTT
TCTGCATTATTTTGTTTTAAATTATGCCACCAATTTGAACGAATTGTTTTATACAGGCTG
GGTCGTTTACAATCAGTTAAAGGCCCTGGTGTTGTGTTTATATTGCCTTGTATTGATTCC
TGGAATAAAATAGATATGAGAACTAAAGCATTTAACATTCCACCAACAAGACTACGGACA
ACTGATGGTTGTATTGTATCAGTTGGTGGTGTGATTCATTTTAGGGTACAAAATCCCATA
TTAATGACAAGCTCCATTCAAGATATGAATCATGCTGTTAGGGAAATTTCTCAATCTGTT
ATGGCCAACTTCTTGTGTAAAAAGAATATTAATGATATTATGAACAGTCGTGGAAAATAT
AATTATGATATTCAAATTGATATCAATACTGTTACTAAAGATTGGGGCTTAGAAATTAGC
CGAGTTGAACTTTCACAAGTAAATGTAGAGGTTACACCTAATGCCAAATCCCCTTTTCCT
CAACAGCAAGCTGGCATGGGTGATAATCTTTCAATGGAAACCATAGCAATGATGGCTCAA
CAATTTATGTCACATAAACAGAAAAAAGAAACCAACACTAGCGGCTCTACCAACACACTA
GCGGCTCTACCAAGTAAAACTGTAGTATCAAACGCAACTCCAGATTCGCTTTTAGAAATA
TTAGGGAAATCTTTGAACAGTGATCTTGTAGCAAAAGTGAACGCTTCTTATGAGCTAACT
TTGGACGATATTAATGAAATATTTTTTATTGATTTAACATCTGGAAATGGCCGATGTGGT
AAAGGAAAACTGGGAATTGAACCAGATGTACATCTTGGACTGTCGTTTTTGACATTACAA
AAGTTATTATCTGGGGACATTGGAGCTTATGATGCCTACTCAAGTGGTGAATTGAGAGTT
CATGGGGACAAAAGCAAAGCATTAGAGCTAGATAAAGTTGTTGCGTGTTTTAAAGCAAAT
GCGTAG
| PANTHER |
SLP1 (IPR028517) - T[48-397] 3.0E-94 |
| SMART |
Band_7 (IPR001107) - T[84-243] 1.3E-26 |
| PRINTS |
Stomatin_fam (IPR001972) - T[91-113] 1.9E-18 - T[138-159] 1.9E-18 - T[173-190] 1.9E-18 - T[193-216] 1.9E-18 - T[217-235] 1.9E-18 |
| Pfam |
Band_7 (IPR001107) - T[93-230] 7.5E-17 |
| SUPERFAMILY |
Band_7/SPFH_dom_sf (IPR036013) - T[115-230] 7.72E-21 |
| Gene3D |
SCP2_sterol-bd_dom_sf (IPR036527) - T[278-401] 3.0E-14 |
| SUPERFAMILY |
SCP2_sterol-bd_dom_sf (IPR036527) - T[286-394] 2.16E-18 |
| Pfam |
SCP2_sterol-bd_dom (IPR003033) - T[304-393] 4.5E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STOM_HUMAN | 37.059 % | 143 | 7.6E-40 |
| STML3_HUMAN | 32.121 % | 126 | 2.13E-33 |
| STML1_HUMAN | 31.944 % | 209 | 5.33E-64 |