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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.424.v5...' > 
  2. Region 'REG00001485' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S46...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...' > 
  5. Transcript 'Moocci.CG.ELv1_2.S23...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S236365.g05312.01.t

Possible name(s)

GNPTG; PRKCSH; SORL1

Gene model

Moocci.CG.ELv1_2.S236365.g05312

Location

S236365 [31,794 / 36,544]

Sequences

Amino acid sequence

Length: 553

>Moocci.CG.ELv1_2.S236365.g05312.01.p
MKVYIFISSYFTAFVGVSLSQSVDRPRGVPLSHSILYDAKSDFTCLDGLNSIPFSQVNDD
YCDCNDGSDEPGTSACPNGTFYCTNAGFKPNIIPSSRVNDGICDCCDTSDEWNSAGLCQN
NCKELYKRAHEELLQQAQQANEGFMIRQQYASDGQKVKTENQKNLEQLKQSLEIARAEVL
ELELQKEEAEKAEKEAKQEEQTKWEEFKAQVAAREDLKDAVEAFVSLDIDRDAIVTVNEI
LPHSELNPNGEAEFNEESAKELLGGSSVEASVFLEEIWPKISSAFVYIDAETAEQTTTSE
ENLAPEEHLEDEDMEDEDYEDELAEDEEQEEEEEEEWDESGHHHTVHKHEKDKQDEPEET
KQEDTPSELSTPPPARSVDLPSDPPYTPVTKILIRAAGDLRNKHRDADNKKKELENQISS
LENELTMDFGPDEAFHALKGQCFELKTIEYIYKLCPFDKTVQVPIKGGSETSLGKWEGWS
GPDDNKYASMKYTRGLKCWNGPDRSTFVNLSCGSENSVLSASEPSRCEYKFEFTTPAVCK
QIVLPKVPSHEEL

Nucleotide sequence

Length: 2,027

>Moocci.CG.ELv1_2.S236365.g05312.01.t
CAAATGTCGAACTGTCTGATAGGCATATCCAAGAAAATCTAAAAAAATAGAGCTATTATG
AAAGTATATATATTTATTTCGTCTTATTTCACAGCCTTTGTTGGAGTCTCTTTATCTCAG
AGTGTTGACAGACCGCGTGGAGTTCCTTTAAGTCATAGCATATTATATGATGCTAAATCA
GACTTTACATGCTTGGATGGTTTGAACTCAATCCCGTTTTCCCAAGTAAATGATGATTAT
TGTGACTGCAATGATGGGTCTGATGAACCAGGAACATCAGCATGCCCCAATGGAACATTT
TACTGCACAAATGCTGGTTTCAAGCCAAATATAATTCCTTCATCCAGGGTTAATGATGGT
ATCTGTGATTGTTGTGACACAAGTGACGAATGGAATAGCGCAGGACTTTGTCAAAATAAT
TGTAAAGAATTATATAAACGAGCGCACGAAGAACTATTGCAACAAGCACAACAAGCAAAT
GAAGGATTTATGATACGACAACAGTATGCCTCTGATGGACAAAAAGTTAAAACAGAAAAC
CAGAAAAATTTGGAGCAACTAAAACAATCGTTAGAAATTGCACGTGCAGAAGTTCTTGAA
CTTGAACTCCAAAAGGAAGAAGCAGAAAAGGCAGAGAAAGAAGCAAAACAGGAAGAACAA
ACAAAATGGGAAGAGTTTAAAGCTCAAGTTGCAGCACGGGAAGATTTAAAAGATGCTGTT
GAAGCATTTGTGTCACTAGATATCGATCGAGATGCAATTGTAACAGTCAACGAGATTCTA
CCACATAGTGAACTTAACCCCAATGGTGAAGCTGAATTTAATGAGGAAAGTGCCAAGGAG
TTACTAGGAGGAAGCTCGGTAGAAGCCAGTGTTTTTCTTGAAGAAATTTGGCCAAAAATA
TCATCTGCATTTGTTTATATAGATGCTGAAACTGCAGAGCAGACTACCACAAGTGAAGAG
AACCTTGCTCCTGAGGAACATCTTGAAGATGAAGATATGGAGGATGAAGATTACGAGGAT
GAACTGGCTGAGGATGAAGAGCAAGAAGAGGAGGAGGAAGAGGAGTGGGATGAGAGTGGA
CACCATCACACTGTGCACAAGCATGAGAAGGACAAACAGGATGAACCAGAGGAAACTAAA
CAAGAGGATACTCCATCAGAATTATCTACTCCTCCCCCTGCTAGATCGGTAGATCTTCCA
TCCGACCCGCCTTACACACCTGTAACTAAAATTCTTATAAGAGCTGCAGGTGACCTTCGC
AATAAACATAGAGATGCTGATAACAAAAAGAAAGAACTCGAGAATCAAATAAGCTCACTG
GAAAACGAGTTAACAATGGATTTTGGACCAGACGAAGCATTTCATGCCTTAAAAGGACAA
TGTTTTGAACTTAAAACTATAGAATACATCTACAAACTTTGTCCTTTTGATAAAACTGTA
CAAGTCCCAATCAAAGGAGGATCTGAAACATCTTTAGGGAAATGGGAGGGTTGGAGTGGA
CCAGATGATAACAAATATGCAAGTATGAAATACACTAGAGGGTTGAAATGCTGGAACGGC
CCAGATAGGAGCACATTTGTAAACCTGTCTTGTGGTTCCGAAAATTCAGTATTATCTGCA
TCCGAGCCATCGCGGTGTGAATACAAGTTTGAGTTCACAACACCTGCTGTATGCAAACAA
ATTGTACTTCCTAAGGTACCATCACATGAAGAACTTTGATTATACAAGCAAAGTGATACA
TATTAGCTGTCAAACATTCATGCAGTTCAATTAAATTTTGTAGGTTGTATTATGTCACAA
TTAGTTTTTTATACACTTAAGTCTAAAATATTACTGTATTTGTTTTCCTATGTGATTAGG
TTAGAAAAATATTCTAATTCTTTTGGATATTATGCATAGTTCTTTATGTTATCTGTATAA
CTACTTATTGATGCAATATTTCATGTTGAATTTTAGAAAAATTTACTCGCTATTTATGTT
CATTATTCCAAAATTGTCTATGCGCTGTAATAAAATCTAATATCCAA

InterProScan

PANTHER
Glucosidase_2_bsu (IPR026874) - T[5-543] 1.9E-129
Pfam
PRKCSH_N (IPR028146) - T[16-176] 6.6E-44
CDD
LDrepeatLR_classA_rpt (IPR002172) - T[76-113] 0.00143942
Pfam
PRKCSH (IPR036607) - T[405-547] 1.5E-29
Gene3D
Man6P_isomerase_rcpt-bd_dom_sf (IPR009011) - T[435-539] 8.2E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GLU2B_HUMAN 46.97 % 253 1.54E-77