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TRANSCRIPT CARD

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  1. Clone 'cign065b19' > 
  2. Clone 'cien173903' > 
  3. Clone 'ma319o19' > 
  4. Clone 'AHC0AAA177YC02' > 
  5. Transcript 'Moocci.CG.ELv1_2.S23...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S234246.g05264.01.t

Possible name(s)

ATAD5; CHTF18; RFC1

Gene model

Moocci.CG.ELv1_2.S234246.g05264

Location

S234246 [453 / 13,175]

Sequences

Amino acid sequence

Length: 1,000

>Moocci.CG.ELv1_2.S234246.g05264.01.p
MEFDFNDVIAYEESQAFEDQYADDFDALNNLQDDCDLPNLQPHSKSKCKTESAKEKPDPV
RKLFSDNEAIVTNENDLIIDEGDAFSMSPIKKRCRVDSEEDVYLPPSKKPSMPTTLDVDK
DEAQRKREEKRKKALTGSPEVIEKILRRRERYNMDSNTADLFQNDKDFQSIKQRPFQLTK
VLHHPPHCDYMPATSSGGCRVYMRMRKKQSNSETVSNISQGSLLTEDIAKLRQAVQNQKL
NAVYKESMRITQQVRNENHRINEEEEINALSAAIDMDSDVARQALAVDLSFEQSKTEESI
AQEITTENSQANSELWLNKYAPTQYTHLLSDETVNRSVLKWLKMWDPVVFGREYKPRKDP
NHEEKEANNFQNKFKKYNILEHIDDKVDEFKRPIWKAALLCGTPGLGKTTLAHIIAKHAG
YHVVEMNASDDRSADAFKRKLEETTQMTSVLTSDNRPNCLIIDEIDGAPVAAINVLLAAM
NKGSQKKAKPGKLKRKDSSGILMRPIICICNDLYTPALRQLRQQSLVLHFPPTSSATLAS
RLAQLCRLQQLQCDTTTLLNLCEKAENDIRSCINTLQFIQSQGTKRLDLQMIKSLEIGQK
DQHKSIFTVWHEIFQLPKNKRKTDKNTESLKLDYHLSNQKLSQFSARFYAIYQMVCANGD
YEKTLQGVYENFLLMKFKDPDMSGLRKAYEWLELYDCLNTSVLSHQEYGLFQYIPFLFVL
YHLLFSCIKVPRIPYPTTNSEFLKQKQKNENLLHMMFIDMNPQIQCFASRRNVTQDILPY
LLLIMTPQIRPVNVQLFNTYERRQLRDLVQTMLQYNLTYHQERNEDGQYNYTLEPNVADV
CLFEGMQEHMKLTYANKQMIAKEVELERMRRSENLLQSHSKKNLPPTVFATPNKKSKKVS
TKSNNTTPNKTVTPSKNLPNHLQRLEDKIANSQIIKEKPVIDFFSRFKKLERIETDDNSS
SKSKKSAPRDPGIGNSQIWYRFNEGFSNAVRRTIYVKDFL

Nucleotide sequence

Length: 3,191

>Moocci.CG.ELv1_2.S234246.g05264.01.t
AGGCCTGGCCTAGATTTAGCCTTTTAAAGCTGTTAAACTGTTAAAGATTTCAAGTTACTG
ATCAGCGATCTTCTGATTGTCTGATCTTACAGTCTTACATAAGACTAAGATGGAATTTGA
TTTTAACGATGTTATTGCATATGAAGAATCTCAAGCCTTTGAAGACCAATATGCTGACGA
TTTTGATGCTTTAAATAATTTACAAGATGACTGTGACTTGCCAAATTTGCAGCCTCACAG
CAAATCAAAATGTAAAACCGAAAGCGCTAAAGAAAAACCTGATCCTGTTCGAAAATTATT
TTCTGATAATGAAGCAATTGTAACCAATGAAAATGATTTAATTATTGATGAAGGAGATGC
TTTTAGTATGAGTCCAATCAAAAAAAGATGCAGAGTTGATTCAGAAGAAGATGTTTATTT
GCCACCATCAAAAAAACCTAGCATGCCGACAACTTTGGATGTTGATAAAGATGAAGCACA
AAGAAAAAGGGAGGAAAAAAGAAAAAAAGCATTAACTGGTTCACCAGAAGTTATTGAAAA
AATATTAAGAAGAAGGGAGAGATACAATATGGACTCTAATACAGCTGATCTATTTCAAAA
TGATAAAGATTTTCAATCTATAAAACAACGACCATTTCAACTTACCAAAGTCTTACACCA
TCCTCCTCACTGTGACTATATGCCTGCTACATCTTCTGGTGGGTGTAGGGTCTATATGAG
AATGAGGAAAAAGCAATCTAACAGTGAAACCGTCTCCAACATAAGTCAAGGATCACTATT
AACTGAAGATATTGCCAAGTTGAGACAAGCTGTCCAAAACCAGAAATTAAATGCAGTCTA
CAAAGAATCTATGCGGATAACGCAGCAAGTACGGAATGAGAATCATAGAATAAATGAAGA
AGAAGAAATAAATGCTCTCAGTGCAGCGATTGATATGGATAGCGATGTTGCTAGACAAGC
TCTTGCTGTGGATCTTTCGTTCGAGCAGTCAAAAACTGAGGAAAGTATTGCTCAAGAAAT
AACTACTGAAAACTCTCAAGCTAATTCTGAACTGTGGTTGAATAAATATGCCCCGACTCA
GTATACGCATTTATTAAGTGATGAGACAGTTAATCGGTCCGTTTTGAAATGGTTAAAGAT
GTGGGACCCAGTTGTGTTTGGTAGAGAATATAAGCCAAGAAAAGATCCTAATCATGAAGA
AAAAGAAGCAAATAACTTTCAAAACAAATTTAAGAAATACAACATTTTAGAGCATATTGA
TGATAAAGTTGATGAATTCAAACGACCAATTTGGAAAGCAGCGTTACTGTGTGGCACACC
AGGACTTGGCAAAACAACACTTGCACATATTATAGCAAAACATGCTGGGTACCATGTTGT
GGAGATGAATGCTAGTGATGATCGCAGCGCTGATGCTTTCAAGAGAAAACTGGAAGAAAC
AACGCAAATGACATCCGTTTTGACAAGTGATAATCGACCAAACTGCCTAATTATTGATGA
AATAGATGGCGCACCTGTGGCTGCCATAAATGTTCTTCTTGCTGCTATGAACAAAGGAAG
CCAGAAAAAGGCAAAACCAGGCAAATTAAAACGTAAAGATTCTTCAGGAATACTCATGAG
ACCCATCATATGTATCTGCAACGATCTTTATACACCTGCATTGCGACAACTTCGACAACA
AAGTTTGGTTCTCCATTTTCCCCCAACATCATCTGCCACATTGGCATCCAGATTGGCTCA
GTTATGTCGACTTCAACAGTTACAATGTGACACAACAACACTTCTTAATTTATGCGAAAA
AGCGGAAAACGATATTCGATCTTGTATAAACACCTTACAGTTTATCCAGTCACAGGGAAC
AAAAAGGCTTGATTTGCAAATGATTAAATCATTAGAGATTGGCCAAAAAGATCAACACAA
ATCCATATTTACGGTTTGGCATGAAATATTCCAACTTCCCAAGAATAAAAGAAAAACTGA
CAAAAATACAGAATCGCTAAAGCTGGATTACCACCTCAGTAATCAAAAACTTTCACAATT
TTCCGCACGATTTTATGCAATATATCAAATGGTTTGTGCTAATGGTGATTATGAAAAAAC
TTTACAAGGAGTTTACGAAAATTTTTTATTAATGAAATTCAAAGACCCTGATATGTCTGG
GCTGCGGAAAGCATATGAGTGGTTGGAACTGTACGATTGTTTAAATACCTCTGTTCTTTC
CCACCAAGAATATGGTCTGTTCCAGTATATTCCTTTTCTTTTCGTTCTTTATCATCTATT
GTTCAGTTGCATTAAAGTACCAAGGATTCCTTATCCTACTACTAATTCAGAGTTTCTGAA
GCAGAAACAAAAGAATGAAAATCTTCTGCACATGATGTTTATTGATATGAATCCACAAAT
TCAATGCTTTGCATCTCGGAGAAACGTAACACAAGATATTTTACCCTACCTGTTGCTAAT
TATGACGCCTCAAATAAGACCTGTCAATGTTCAATTATTTAATACGTATGAAAGAAGGCA
ATTGCGCGATTTAGTACAAACTATGCTGCAATATAATTTAACATATCACCAAGAGCGCAA
TGAAGATGGACAGTACAATTACACCTTAGAACCGAATGTTGCAGATGTATGTCTGTTTGA
AGGAATGCAAGAGCACATGAAACTAACATATGCCAATAAACAAATGATAGCGAAAGAAGT
AGAATTAGAAAGAATGCGTCGGTCTGAAAACTTGCTGCAAAGTCATTCGAAAAAAAACCT
TCCTCCGACTGTATTTGCCACCCCAAACAAAAAGTCAAAGAAAGTTTCTACCAAAAGCAA
CAACACAACACCAAATAAAACAGTAACACCTAGCAAAAACCTGCCAAACCATTTACAGCG
TTTAGAAGACAAAATTGCCAACTCGCAAATAATTAAAGAGAAGCCGGTGATTGATTTTTT
CAGTCGATTTAAAAAGTTAGAAAGAATAGAAACAGATGACAATTCAAGCTCAAAATCAAA
GAAATCAGCGCCAAGAGATCCAGGAATTGGCAACAGTCAAATTTGGTATCGTTTTAATGA
AGGATTTTCTAACGCTGTTCGCAGAACGATTTATGTTAAAGATTTTTTGTAATTTTGTAT
TAATTTTAGTGAATGCCATTTTAAAATCTATTGATATTAATAAAATAAAAAAAATTAGCA
TAAGAACTTAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[314-351] 2.84E-29 - T[383-592] 2.84E-29
SMART
AAA+_ATPase (IPR003593) - T[394-532] 3.7E-7
Pfam
ATPase_AAA_core (IPR003959) - T[399-502] 4.6E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CTF18_HUMAN 37.803 % 544 1.93E-178
RFC1_HUMAN 23.01 % 101 8.47E-22