- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S7...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocci.CG.ELv1_2.S23...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S231516.g05175.01.t
Possible name(s)
DNA2; IGHMBP2; UPF1
Gene model
Location
S231516 [26,114 / 31,256]
Amino acid sequence
Length: 943
>Moocci.CG.ELv1_2.S231516.g05175.01.p
MCFIFLGDIVEVFKSGENPTNTSNSLSGVLLRITDKTIQVALDNDDAKSEADVFDNQNST
LTILKTSNEITYRRLKSCLDKLRKHESMKNYNLIDICFSTSLPSQPVKIIEDIKWQNNKL
NKSQKEAVEFALNQKEIALIHGPPGTGKTTTVIELILQLVNLGNKILACAPSNVAVDNLV
EKLHNVYKTNVKMVRLGHPARILPSSAQKTSLDAILSRSDASAILSDIKQEIDNIMKTKK
RNNNKGVQHKNYQEKKLLLKELKQREEKAIKEILMTADVILCTTVGAHDKGPLKNLPPNY
FDVAIVDECGQGLEIGCWIPILHARKCILAGDHLQLPPTVVSKEAGKDGLSISLLERIAK
KHEQVVKMLTMQYRMNQSIMKWASDCMYESRLVAHQSVASHLLSDLPNVTETEETSIPIL
LIDTAGCNMPEIEGEDGDSKGNEGEVELVIAHVKDLIKAGISPDSIAVISPYNLQVDLLR
TGLLMDYPALEIKSVDGFQGREKEAVVLSLVRSNDAGDVGFLSDNRRLNVAVTRARRHIA
IICDSITVSSDKFLQGLVDYMMENGEVRSASQYANEITHTVVGENLPSINNKPLKNQCIK
AKPELSAEEKAMKHKEFHQQINAFVLQSEKEGVFEMEFPSSLTSLDRMIIHEICEKIKLK
HTSIGEGKDRRITVSIKRKDAEDNYSMKASANKLSSSKEEKTNKQDTRGIQNCDDINVSV
IEDQYKQKNIENETAIPSYETTDEHKRDKETSKVMEHMKQMDLREKKEDETNYSVCEKCG
KELPFCNMKMHLIHCERLFKMKEAIKNKKHESKANSNKNQKKHGKNKKSSGPLVLDDALL
DESATSNKFCSHSSCNTYVTTVGQLCHSCKKMYCFSHHLPEVHGCGKTVHANARRQISRD
GFLQSGSGVTNKKLQPAKRAALQRRLNEKVSEKERSRKSKKSK
Nucleotide sequence
Length: 2,929
>Moocci.CG.ELv1_2.S231516.g05175.01.t
ATGTGCTTTATCTTTTTAGGTGATATTGTTGAAGTATTTAAATCTGGCGAAAATCCAACA
AACACTTCAAATTCTTTATCTGGAGTTCTTTTAAGAATAACAGACAAAACGATACAAGTT
GCTTTGGATAATGATGATGCTAAATCCGAAGCTGATGTTTTTGATAACCAAAACTCAACA
TTAACAATCTTAAAAACGTCCAATGAAATAACATACAGGAGATTGAAAAGCTGTCTGGAT
AAATTAAGAAAACATGAATCCATGAAAAATTATAACTTGATTGATATTTGCTTTTCCACT
TCATTACCCTCACAGCCCGTGAAAATTATTGAAGATATAAAGTGGCAGAACAATAAACTT
AATAAGTCTCAGAAAGAAGCAGTTGAATTTGCTTTGAATCAAAAAGAAATTGCACTTATT
CATGGGCCTCCAGGGACAGGAAAAACTACTACTGTAATAGAATTAATTTTACAGCTTGTT
AACCTTGGGAACAAAATATTAGCTTGTGCGCCATCAAATGTAGCAGTTGACAATCTGGTA
GAGAAACTTCACAATGTTTATAAAACAAATGTTAAAATGGTTCGGCTGGGACACCCTGCA
CGAATCTTGCCATCCTCAGCGCAAAAAACTTCATTGGATGCAATATTATCGCGAAGTGAT
GCCTCTGCAATTTTGAGCGATATTAAACAAGAAATAGATAATATTATGAAAACAAAAAAG
AGAAATAATAACAAAGGAGTTCAACATAAGAATTACCAAGAAAAAAAGTTATTATTGAAA
GAACTTAAACAGCGAGAAGAAAAAGCTATAAAAGAAATTTTGATGACTGCAGATGTAATC
CTGTGTACTACTGTTGGAGCGCATGATAAAGGCCCTTTAAAAAACTTACCACCAAATTAC
TTTGATGTAGCTATTGTAGATGAATGTGGCCAAGGATTAGAAATCGGATGTTGGATTCCC
ATATTACATGCAAGAAAATGTATATTGGCAGGCGATCACCTCCAGCTTCCGCCAACCGTA
GTTTCCAAGGAAGCAGGAAAAGATGGATTATCTATATCATTATTGGAAAGGATCGCTAAA
AAACATGAACAAGTTGTTAAAATGTTAACTATGCAATACCGAATGAATCAAAGTATTATG
AAGTGGGCATCTGATTGTATGTATGAATCACGTCTGGTAGCACACCAATCTGTTGCTTCT
CATTTGTTAAGCGATCTTCCAAATGTAACAGAAACTGAAGAAACATCTATTCCTATTTTG
TTAATAGACACTGCAGGATGCAATATGCCGGAAATAGAAGGAGAGGATGGGGATTCAAAA
GGAAATGAAGGCGAAGTGGAATTGGTCATAGCTCATGTTAAAGACTTGATAAAAGCGGGT
ATTAGCCCAGATTCAATTGCAGTCATATCACCTTACAATTTGCAGGTGGATTTATTAAGA
ACTGGCCTCTTGATGGATTATCCTGCTTTAGAAATCAAGTCTGTAGATGGTTTTCAGGGC
CGTGAAAAGGAAGCTGTTGTATTGTCATTAGTCCGGTCAAATGATGCTGGTGATGTTGGA
TTTCTTTCAGATAATAGAAGATTAAATGTCGCTGTTACCCGAGCTAGACGACACATAGCG
ATAATATGCGACTCAATAACTGTATCGTCAGATAAATTTCTCCAGGGTCTTGTAGATTAT
ATGATGGAGAATGGGGAAGTTCGTTCTGCTTCTCAATATGCAAATGAAATCACACATACA
GTTGTAGGTGAAAATCTTCCCAGTATAAATAACAAGCCATTAAAAAATCAATGTATAAAA
GCAAAACCTGAATTAAGCGCAGAGGAAAAAGCAATGAAACATAAAGAATTCCACCAGCAA
ATAAATGCATTTGTACTACAAAGTGAAAAAGAGGGTGTTTTTGAAATGGAATTTCCCTCA
TCTTTAACCTCCTTAGATAGAATGATTATACATGAGATTTGTGAAAAAATAAAACTTAAG
CATACAAGTATTGGGGAGGGTAAAGACAGGCGAATAACAGTAAGCATAAAGAGAAAAGAT
GCTGAAGACAATTATTCCATGAAAGCATCTGCAAATAAGCTATCATCCTCCAAAGAAGAG
AAAACAAATAAACAAGATACTAGGGGTATACAAAATTGTGATGATATTAATGTGTCTGTT
ATAGAGGATCAATATAAACAAAAAAACATTGAAAATGAAACTGCTATACCAAGTTATGAA
ACCACTGATGAGCACAAGCGTGACAAAGAAACGTCAAAAGTTATGGAACATATGAAACAA
ATGGATTTAAGGGAAAAGAAAGAAGATGAAACAAATTATTCGGTCTGTGAAAAATGTGGA
AAAGAGCTTCCTTTTTGTAATATGAAAATGCATTTGATACACTGTGAACGCCTTTTTAAA
ATGAAAGAAGCAATAAAAAATAAGAAACACGAGTCTAAAGCTAATTCTAATAAAAATCAG
AAAAAACATGGAAAAAACAAAAAATCAAGTGGTCCTTTAGTTTTGGATGATGCTTTATTA
GATGAGTCAGCAACTTCAAATAAGTTTTGTTCGCACTCGTCTTGCAATACATATGTGACA
ACAGTGGGGCAACTTTGTCATAGTTGCAAAAAAATGTATTGTTTTTCTCATCACTTACCA
GAGGTTCATGGCTGTGGGAAGACAGTACATGCAAATGCTCGCCGTCAAATATCAAGAGAT
GGTTTTCTGCAAAGTGGGAGTGGTGTTACAAACAAGAAACTACAACCAGCAAAACGTGCC
GCTCTTCAACGTAGATTAAATGAAAAAGTTAGCGAAAAAGAAAGAAGTAGAAAGTCGAAA
AAATCAAAATAGTATTTGGTTATTTGTAGATTTTTTAATACTGGTATAATTTATAACAAT
TTTAATTATATGATAAGTATTAAATATATTGACATTTATATATGCTTGA
| TIGRFAM |
SMUBP-2/Hcs1-like (IPR004483) - T[6-571] 1.8E-181 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[113-553] 8.99E-69 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[116-365] 0.0055 |
| SMART |
AAA+_ATPase (IPR003593) - T[134-369] 8.2E-4 |
| SMART |
R3H_dom (IPR001374) - T[599-677] 4.1E-7 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[601-685] 7.7E-19 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[611-678] 14.292 |
| Pfam |
R3H_dom (IPR001374) - T[615-675] 1.0E-12 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[616-675] 8.83E-10 |
| Gene3D |
AN1-like_Znf (IPR035896) - T[837-903] 4.8E-7 |
| SUPERFAMILY |
AN1-like_Znf (IPR035896) - T[841-903] 1.22E-9 |
| ProSiteProfiles |
Znf_AN1 (IPR000058) - T[847-893] 8.109 |
| Pfam |
Znf_AN1 (IPR000058) - T[850-887] 7.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RENT1_HUMAN | 35.824 % | 218 | 1.99E-58 |
| SMBP2_HUMAN | 48.808 % | 648 | 0 |
| DNA2_HUMAN | 30.926 % | 181 | 1.08E-46 |