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  1. Transcript 'Moocci.CG.ELv1_2.S22...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S222152.g04895.01.t

Possible name(s)

SDE2; SF3A3

Gene model

Moocci.CG.ELv1_2.S222152.g04895

Location

S222152 [5,283 / 15,734]

Sequences

Amino acid sequence

Length: 452

>Moocci.CG.ELv1_2.S222152.g04895.01.p
MEVASKLLDLYADRDGLRKEEIQAIAGPDEFNEFYKRLSEVKDFHRKHPDEVFVPMSVEF
AELDLTRDNPNEEASNLVEFTDEESYGHFLDLHERHMQYLNLKGAQKLNYVQYLDHFDKL
FEFPRDKKSNLYKGYVEELLSYLVSYIERVTPLLDLNLEYNRVRENFDAQWAKSEFPGWG
REAGSAMAHIGAHLDLSAFSSSEELASLGLDRLKSALMALGLKCGGTLEERAARLFSTKG
KEMSELDPSLFSKAKGAKGKKSATVLKREREIAFIEAQIYHLVEMVSEQRQATRENVQRR
QARTDTEREDDDDEVPSESESDEDDEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE
ICGNQVYRGPKAFQRHFSEWRHAHGMRCLGIPNTAHFANVTKIEDAMALWSKIKEMKTAE
RWNPDAEEEFEDSAGNVVSKKTYEDLNRQGLL

Nucleotide sequence

Length: 2,080

>Moocci.CG.ELv1_2.S222152.g04895.01.t
GTTTATTTTTGATATAGCATTGTGTTTAATTGTAGCTGCATGTTATCTTGACAACCCTGT
GCACTGAAACAAGTTAAAAAACTCTACAATGTTTTTTGATAGATGTTTGTGACAGTGACG
AAGCAGATAAAGAAGAAATATCTTTTCCACAGAGAAAAGCAAACTTTATTCCTTTAACCT
TAGAATTAAATTTTATTTAATGATCAATAATTCAACTATTTTTAGAGAAAAATGGAAGTA
GCGTCAAAACTTCTTGATCTGTATGCTGATAGAGATGGACTAAGAAAGGAAGAAATTCAG
GCGATTGCAGGCCCCGATGAATTTAACGAGTTTTACAAGCGATTAAGCGAGGTTAAAGAT
TTCCATCGCAAGCATCCTGATGAAGTTTTTGTTCCAATGTCAGTGGAGTTTGCAGAACTT
GATCTGACGAGAGATAATCCCAATGAGGAAGCTAGCAACTTGGTTGAGTTTACTGATGAG
GAATCGTACGGTCACTTTCTTGACCTTCACGAGCGACACATGCAGTACTTAAACTTAAAG
GGGGCACAGAAGCTAAATTATGTGCAGTACCTCGATCATTTTGATAAGCTGTTTGAGTTT
CCCAGGGATAAGAAGTCTAACTTATACAAAGGATATGTTGAAGAGTTGCTAAGCTATCTA
GTATCGTACATAGAGCGTGTGACACCACTATTAGACCTGAACCTGGAATACAATCGAGTG
AGAGAAAACTTCGATGCACAGTGGGCCAAAAGCGAGTTTCCTGGATGGGGAAGAGAGGCT
GGAAGTGCAATGGCACATATCGGTGCCCATCTTGATTTGAGTGCATTTTCATCATCAGAG
GAACTAGCATCCCTTGGCCTCGACAGGTTGAAGTCAGCATTGATGGCACTCGGTTTAAAG
TGTGGTGGCACGTTGGAGGAGCGTGCCGCTCGTTTGTTTAGCACTAAGGGGAAAGAGATG
AGCGAGCTTGACCCTTCACTCTTTTCAAAAGCTAAAGGAGCCAAAGGGAAGAAAAGCGCC
ACGGTGCTAAAACGAGAGCGGGAGATTGCGTTCATCGAAGCGCAGATCTACCACTTGGTG
GAGATGGTGAGTGAGCAACGACAAGCGACCCGCGAAAACGTGCAACGTCGGCAAGCACGC
ACAGACACCGAACGTGAAGATGACGACGATGAAGTCCCATCAGAAAGTGAATCGGACGAG
GATGACGAGATAATCTACAACCCGAAGAACCTGCCGCTCGGATGGGACGGCAAACCGATA
CCGTACTGGTTGTACAAACTCCACGGTCTCAACATCAACTATAACTGCGAAATCTGTGGC
AATCAGGTCTACCGCGGTCCTAAGGCATTCCAGAGACATTTCTCGGAATGGCGACACGCC
CACGGCATGAGATGCCTTGGGATTCCCAACACAGCTCATTTTGCCAACGTTACAAAGATC
GAAGATGCAATGGCATTATGGTCGAAAATCAAGGAAATGAAAACAGCAGAACGGTGGAAC
CCTGATGCAGAAGAGGAGTTTGAGGATTCTGCAGGCAACGTTGTTTCAAAGAAGACCTAC
GAAGACTTGAACCGACAGGGGCTTTTGTGATGCCATTCACTGTAAATAGACAGAATCCGA
TCTGCGCACCTTTGTCGGATAAAACATTAAAATCTGCAGAAAAATTTATACTCCGACTGA
GACTTTCTTCATTGGACTTTGTTAAAGTTTCAAGTCGATTTAACTTGACATGACCAAAAA
TTACCTACTGAAAAACCCACATTAAATTTTTTGTGTGCTTGTTTACTTTGCTTTGTACAA
TTCCAACATACATCAGGCCACGAAATTTCTTGGAATCAATAGTTAAATAATTTTGTGTAA
CCTATACTTGGTTTCCCTAATTAGTAATATTGAACATCAATTACATTATTAATAATGCTC
AATTGTATTTTATTTGCAAGACTGAAAAATAGTTCGCATAAACTTATGACATTTCAAAGC
CTGCTACATAATGATAATATCTTTTATTTTACTTGAAATTTAAAAGCTAAAAACCTTTTG
CGCAAAAATTACATAATTTTAGTAGTATCGAGTAACTCAA

InterProScan

PANTHER
SF3A3 (IPR031776) - T[1-452] 2.0E-165
Pfam
SF3a60_bindingd (IPR021966) - T[24-50] 2.5E-13
Pfam
SF3A3_dom (IPR031774) - T[79-156] 6.8E-22
Pfam
DUF3449 (IPR024598) - T[276-451] 5.7E-77
ProSiteProfiles
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[357-388] 9.172

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3A3_HUMAN 65.784 % 615 0