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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S20...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S202200.g04270.01.t

Possible name(s)

TMED1; TMED5; TMED7

Gene model

Moocci.CG.ELv1_2.S202200.g04270

Location

S202200 [900 / 2,144]

Sequences

Amino acid sequence

Length: 221

>Moocci.CG.ELv1_2.S202200.g04270.01.p
MSGANCSLTLIIVLLAVHSQAYKETDFTVQIEPMKKECYYQYTKKDQTMDIEYQVIEGGD
LDVDFSLQAPGGRVIMREIRKSDGMHTVEPTEEGDYIICFDNSFSRMTGKTVFFDIVEDA
AGMEDDADYGWKDSVVPDETYGEKLVGFEDTIGQIRSNLGKTFQVQSLLRAFEAKDRGVA
ERNYSRVNFWSVFNICAMCLVFVLQVYTVRSMFSDNKKTRT

Nucleotide sequence

Length: 666

>Moocci.CG.ELv1_2.S202200.g04270.01.t
ATGAGCGGAGCGAACTGCTCTTTAACACTCATCATTGTTTTACTTGCTGTACATTCTCAA
GCATACAAAGAAACTGACTTTACCGTTCAAATTGAGCCAATGAAAAAAGAATGTTATTAT
CAGTATACTAAAAAGGATCAAACGATGGATATTGAGTATCAAGTTATTGAAGGGGGAGAT
TTGGATGTTGATTTTTCATTACAAGCTCCTGGAGGAAGAGTAATTATGCGAGAAATAAGA
AAAAGTGATGGGATGCATACTGTTGAGCCCACTGAAGAAGGAGATTACATTATATGTTTT
GATAACAGTTTCAGTAGGATGACAGGAAAAACCGTGTTTTTTGATATTGTAGAAGATGCA
GCAGGCATGGAGGATGATGCTGATTATGGATGGAAAGATTCTGTTGTTCCTGATGAAACT
TATGGTGAAAAATTAGTCGGTTTTGAAGATACAATTGGGCAGATAAGATCGAATTTAGGT
AAAACATTTCAAGTCCAATCTTTACTCCGAGCTTTTGAAGCTAAAGACAGGGGAGTTGCA
GAAAGAAACTATTCTCGGGTTAATTTTTGGTCTGTGTTTAATATATGTGCAATGTGTTTG
GTGTTTGTACTGCAGGTTTATACTGTTCGAAGCATGTTTAGTGACAACAAAAAAACTAGA
ACATAA

InterProScan

PANTHER
TMP21-related (IPR015720) - T[13-219] 1.2E-65
SMART
GOLD_dom (IPR009038) - T[26-214] 8.5E-54
Pfam
GOLD_dom (IPR009038) - T[27-213] 4.1E-39
SUPERFAMILY
GOLD_dom_sf (IPR036598) - T[35-124] 7.06E-22
ProSiteProfiles
GOLD_dom (IPR009038) - T[36-118] 21.297

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED7_HUMAN 30.964 % 100 3.95E-26
TMED1_HUMAN 43.5 % 165 4.47E-51
TMED5_HUMAN 43.434 % 173 1.69E-54