Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S199024.g04142.01.t

Possible name(s)

FCN3; MFAP4; TNR

Gene model

Moocci.CG.ELv1_2.S199024.g04142

Location

S199024 [6,682 / 10,087]

Sequences

Amino acid sequence

Length: 222

>Moocci.CG.ELv1_2.S199024.g04142.01.p
MWTVDGFDMSTETGVVRIYPEPFVEKCVEVYCEESNHVNSRWIVIQRRINGSVDFYRTYN
EYVNGFGNKNGEFWYGLENIHQLTAADEYDLLIELEDFAGNTAYETYSISPNFFNPNPLK
HVRIRRSNFSLGNSTQKYVLHLENPQGTAGNALSLNGKDGGIGMKFSTYDSDNDIASWKN
CAVENHGAWWYKWFKCHQANLNGKYYKSSIIANDGIFAKALN

Nucleotide sequence

Length: 669

>Moocci.CG.ELv1_2.S199024.g04142.01.t
ATGTGGACAGTCGATGGATTTGATATGTCAACAGAAACAGGTGTGGTTCGAATCTACCCC
GAACCATTTGTTGAAAAATGTGTTGAGGTTTACTGTGAAGAAAGTAACCATGTGAACAGT
CGATGGATTGTAATCCAACGCCGTATAAATGGTTCTGTGGATTTTTACCGCACCTACAAC
GAATACGTCAACGGATTTGGTAACAAAAATGGCGAGTTTTGGTATGGTCTGGAGAACATT
CACCAACTAACTGCAGCGGATGAATATGATTTATTGATTGAGCTTGAAGATTTTGCCGGG
AATACCGCGTATGAAACATATTCAATTAGTCCTAATTTCTTCAATCCTAATCCGCTCAAG
CACGTTAGAATTAGACGATCAAATTTTTCCCTTGGAAACAGTACACAAAAGTACGTACTG
CACTTGGAAAACCCACAAGGGACGGCTGGAAATGCACTTTCACTGAACGGTAAAGATGGT
GGTATTGGGATGAAATTCAGTACATATGACAGTGATAACGACATAGCATCTTGGAAGAAC
TGTGCTGTTGAAAATCACGGTGCTTGGTGGTACAAGTGGTTCAAGTGCCACCAAGCCAAT
CTTAACGGAAAGTATTACAAATCTTCCATTATTGCAAACGACGGAATTTTCGCAAAAGCT
TTGAACTAA

InterProScan

ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[1-222] 39.227
SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[5-213] 1.8E-40
Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[7-157] 2.4E-40
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[10-210] 1.96E-53
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[11-108] 4.4E-26 - T[127-217] 2.2E-20
CDD	Fibrinogen_a/b/g_C_dom (IPR002181) - T[14-217] 1.92423E-69
Gene3D	Fibrinogen_a/b/g_C_2 (IPR014715) - T[158-221] 1.4E-17

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TENR_HUMAN	37.879 %	129	2.7E-34
MFAP4_HUMAN	40.394 %	126	1.24E-35
FCN3_HUMAN	39.362 %	125	5.41E-35