- Transcript 'Moocci.CG.ELv1_2.S18...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S188773.g03760.01.t
Possible name(s)
SLCO4A1; SLCO4C1; SLCO5A1
Gene model
Location
S188773 [36,304 / 40,387]
Amino acid sequence
Length: 548
>Moocci.CG.ELv1_2.S188773.g03760.01.p
MSKVTNKNTFVVCLAFSHFVQGLVANGLTSIVISTLERRYQLQSYLSGIIAAAYDIGFCS
FCVFLPHLLKDGHRPRIIAFGTIAMAVGCVIFASPQFIYGDYEVGNITEKEICNRDGSTL
CAEHGKSAYPENRGAFWLFVIGGIIMGVANIPGFTLGFTFVEDNNSKKTPTLQPNDVKWV
GAWWVGFLAAAGSVVCFSGLPLLAFPNNFVAKNVQIDCKSTEIHKTNKKQNVFTSIKSLL
SNRVVLLIMLAGICEIFVLNSVTVFLPKFVQTQFNVTAEKGAILAGIASVPGAVIGHITA
GYVVRRFNMGVKTSYVFCLRQRSLCFVLRLKLVELITTVPYSNKNQENSCNRQCHCDPTK
FSPVCGSDDVIYMSACHAGCRDFDHSEDVYFGCDCVKNVTKEARNGTCQSDCQMLSPFLI
LLFVINFLSFLYYTPSLLALMRCVKDNQRCLALGMNSLFMRLLGSVPGPVVLGYLIDSSC
KLWQVDQCSGDFGSCWLYNKPRFSFSIIIIAVPLKLISSASFFCARYTYSQIHEDTGEMK
KNTIATLL
Nucleotide sequence
Length: 1,647
>Moocci.CG.ELv1_2.S188773.g03760.01.t
ATGTCAAAAGTGACAAATAAAAACACATTTGTTGTCTGTTTGGCTTTTTCGCATTTTGTT
CAAGGTCTTGTTGCCAATGGCCTTACAAGTATCGTTATTTCAACATTGGAGCGAAGATAT
CAACTACAAAGCTATCTGAGCGGTATCATTGCTGCAGCATATGACATTGGATTTTGTTCA
TTTTGTGTGTTTTTACCTCATTTATTAAAAGATGGCCACAGACCTCGAATTATTGCATTT
GGAACTATTGCAATGGCTGTCGGATGTGTCATATTTGCTTCCCCGCAATTTATTTACGGC
GACTATGAAGTAGGGAACATTACTGAAAAAGAAATTTGTAACCGTGATGGCAGTACACTT
TGCGCTGAACATGGCAAATCAGCATACCCAGAAAATCGAGGTGCATTTTGGCTTTTTGTG
ATTGGTGGAATAATTATGGGCGTGGCAAATATTCCTGGCTTTACCCTTGGATTCACGTTC
GTTGAAGACAATAACAGCAAAAAGACTCCAACCTTGCAACCAAATGATGTGAAATGGGTA
GGCGCATGGTGGGTGGGGTTCCTTGCTGCTGCGGGCTCGGTCGTTTGTTTCTCAGGACTA
CCATTGTTGGCGTTTCCTAATAACTTTGTTGCAAAAAATGTACAAATCGACTGTAAATCA
ACCGAAATACACAAAACAAATAAAAAACAAAACGTTTTTACATCGATTAAAAGTTTACTG
AGTAACCGTGTAGTATTACTCATCATGTTAGCAGGTATATGCGAAATATTTGTTTTAAAT
TCTGTTACCGTCTTTTTGCCAAAATTTGTCCAAACTCAATTCAACGTCACAGCTGAAAAA
GGAGCAATATTGGCGGGCATTGCTAGCGTTCCTGGTGCTGTTATTGGCCACATAACAGCA
GGTTACGTGGTTCGCAGATTCAATATGGGGGTGAAAACGTCATATGTATTTTGTTTGCGC
CAACGTTCTTTATGTTTTGTCCTGAGATTGAAATTGGTGGAATTAATCACAACAGTACCA
TATAGTAACAAGAATCAAGAGAATTCTTGTAACCGCCAGTGCCATTGTGATCCCACCAAA
TTTTCCCCTGTTTGTGGAAGTGATGACGTCATTTATATGTCAGCCTGTCATGCGGGGTGC
CGTGACTTCGACCACTCTGAAGATGTTTATTTCGGTTGTGACTGTGTAAAAAATGTTACA
AAAGAAGCACGAAACGGAACGTGTCAGTCTGATTGTCAAATGTTATCGCCGTTTTTAATC
CTCCTTTTTGTAATCAATTTTTTGTCGTTTTTGTATTACACTCCTAGTTTACTAGCTTTA
ATGAGATGTGTCAAAGACAACCAAAGATGCTTGGCTCTAGGAATGAATTCACTTTTTATG
CGACTACTCGGGAGTGTGCCGGGTCCAGTAGTTTTGGGATATTTGATTGACAGTTCCTGT
AAACTTTGGCAAGTTGACCAATGTTCTGGCGACTTTGGGTCTTGTTGGTTATATAACAAG
CCCAGGTTTTCTTTCAGTATCATCATTATAGCTGTTCCTCTTAAATTAATATCTTCAGCA
TCATTTTTCTGTGCGAGATATACTTACAGCCAAATACATGAAGATACCGGAGAAATGAAA
AAAAATACCATTGCAACTTTACTTTAA
| PANTHER |
OATP (IPR004156) - T[4-168] 2.1E-136 - T[168-538] 2.1E-136 |
| CDD |
MFS_dom (IPR020846) - T[11-309] 3.19116E-4 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[11-96] 3.53E-26 - T[129-340] 3.53E-26 - T[417-535] 3.53E-26 |
| Pfam |
OATP (IPR004156) - T[169-503] 6.3E-74 |
| SUPERFAMILY |
Kazal_dom_sf (IPR036058) - T[339-390] 2.91E-8 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[344-410] 9.673 |
| Pfam |
Kazal_dom (IPR002350) - T[351-395] 8.3E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO4A1_HUMAN | 31.24 % | 276 | 2.24E-84 |
| SO4C1_HUMAN | 29.145 % | 262 | 4.34E-79 |
| SO5A1_HUMAN | 27.702 % | 243 | 2.85E-71 |
