- Transcript 'Cisavi.CG.ENS81.R91....' >
- Transcript 'Boleac.CG.SB_v3.S229...' >
- Transcript 'KH2012:KH.L116.66.v1...' >
- Transcript 'KH2012:KH.C3.15.v1.A...' >
- Transcript 'Moocci.CG.ELv1_2.S17...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S171823.g03300.01.t
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
S171823 [21,610 / 22,708]
Amino acid sequence
Length: 365
>Moocci.CG.ELv1_2.S171823.g03300.01.p
MADVFSFGTHPLCTHAWNADRSQIAISPNNHEIQIYEKNGRQWKLIHTLSEHTGRVTGID
WAPKSNRLVTCASDRNAYVWVLEGQVWRPTLVILRINRAATCVKWSPNEDKFAVGSGARL
ISVCYFEKENDWWVCKHIKKPLRSTVLCLSWHPNNVLIAAGSSDFRGRVFSGYIKDIEPK
PSATTWGKKMNFGNLMQEFCMPHDGWVQGISFSESGDRLVMVSQDSCICVAYGGQEMVII
KTKNLPFTDCAWLTENTVVAVGHDYNPMMYSCNDQCNQLTFMCKLDQKSKSSGGQTMSAM
AKFRMMDKKASTTDDAGEVNTRHKNSILQVENFGPNKISTCGMDGNVIVWDCKSLESQVQ
GLKIV
Nucleotide sequence
Length: 1,098
>Moocci.CG.ELv1_2.S171823.g03300.01.t
ATGGCAGATGTTTTTAGTTTTGGCACACATCCTCTTTGTACCCATGCATGGAATGCAGAT
AGATCGCAAATAGCAATCAGCCCCAACAATCATGAAATACAAATTTATGAGAAAAATGGT
AGGCAATGGAAATTGATACATACTTTAAGTGAGCACACGGGAAGAGTAACTGGAATTGAT
TGGGCACCAAAAAGTAATCGTTTGGTTACTTGTGCAAGTGATAGAAATGCTTATGTTTGG
GTTCTAGAAGGTCAAGTATGGAGACCAACCTTGGTAATTCTGCGAATAAATCGAGCAGCT
ACATGTGTCAAGTGGTCACCAAACGAAGATAAATTTGCTGTTGGTAGTGGAGCAAGATTA
ATATCCGTTTGTTATTTTGAAAAAGAAAATGATTGGTGGGTTTGCAAGCATATTAAAAAA
CCACTCCGATCAACTGTGCTATGTTTATCTTGGCATCCCAATAATGTTTTAATAGCAGCA
GGTTCGTCGGACTTTAGAGGTAGGGTCTTTTCTGGCTATATAAAGGATATTGAACCAAAA
CCATCTGCAACAACATGGGGAAAGAAAATGAATTTTGGAAATTTAATGCAGGAATTTTGC
ATGCCTCATGATGGTTGGGTGCAAGGAATTTCATTTTCAGAATCTGGAGATCGTCTAGTG
ATGGTTTCACAAGACAGCTGCATCTGTGTTGCCTATGGAGGACAAGAAATGGTTATAATT
AAGACTAAAAATCTACCATTTACTGATTGTGCGTGGTTAACTGAAAATACAGTTGTAGCT
GTGGGTCATGATTACAATCCTATGATGTATTCATGTAATGACCAATGCAATCAGTTAACT
TTTATGTGTAAACTGGATCAGAAATCTAAAAGTTCAGGAGGTCAAACCATGTCTGCCATG
GCAAAGTTCAGGATGATGGATAAAAAAGCTTCAACAACAGATGATGCAGGGGAAGTTAAC
ACCCGCCACAAAAATTCCATTTTGCAAGTGGAAAATTTTGGACCAAACAAGATTTCTACT
TGTGGAATGGATGGAAACGTTATTGTTTGGGATTGTAAATCACTGGAATCTCAAGTTCAA
GGACTGAAAATTGTATAA
| PIRSF |
ARPC1 (IPR017383) - T[1-357] 2.9E-143 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[3-365] 4.6E-142 |
| PANTHER |
ARPC1 (IPR017383) - T[3-363] 2.1E-146 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[10-357] 8.06E-49 |
| SMART |
WD40_repeat (IPR001680) - T[42-81] 1.7E-7 - T[90-125] 10.0 - T[131-171] 2.6 - T[194-232] 3.0 - T[313-351] 6.4 |
| Pfam |
WD40_repeat (IPR001680) - T[43-80] 6.6E-5 - T[144-164] 0.16 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[49-80] 11.778 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[49-90] 10.179 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[338-352] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 57.766 % | 422 | 7.03E-148 |
| ARC1B_HUMAN | 53.117 % | 409 | 1.21E-142 |