- Transcript 'Moocci.CG.ELv1_2.S16...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S169368.g03244.01.t
Possible name(s)
CRX; DMBX1; OTX2
Gene model
Location
S169368 [166,944 / 170,381]
Amino acid sequence
Length: 432
>Moocci.CG.ELv1_2.S169368.g03244.01.p
MSYLKTPHYAMNGLGLGHDMNLIHPSVTYPGDSACYFQRLQVQGPKNLQFGGGPVYSNAR
KQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ
QHQQQQKQQKNSTSSTSSSSSSGSNASAKKKSPPSTPTSTNPAPPSSDPPSSTSPFQQNH
INTKTSPVPSTGSPQEPLANATAPVAPLMGQSHPGQNMSAVNNGHTTTPVNNIWSPASVS
PGASSDNGSHGSNMAPLSGGPSIHGSCMSTVPSHGSSLHSPYGMPASTQVSAGNGYSQSA
YAPQSYFGSMEASYLPPMQFPGHSAASMTSQSHNNLSAHQHPSHASHANQFMSQNPYAYS
HHNGTESSLNTYSGSADCVDYKDSQPPAWRFHDSNLFDPAIVSGPLQGVTVTENIEFYQV
KILRQVPTIEIS
Nucleotide sequence
Length: 1,575
>Moocci.CG.ELv1_2.S169368.g03244.01.t
TTAAGTGTAAAATATTATGTATAGAAACAGTTGAACCAAACAATTTTTTGGTTTATTTTA
CAAATTATAAGAGCAGCCATTTTGTTGTAACTTTGCATTCGAGTTTTAGTTGAAAAATAA
CTAACACATTGTTTATTTAACAGATTCCTATTACTATATTTGATTACAACAACTGAATAT
TATCCAAAACCGGAAGTGATTTTAAGAAAACAATCCAGCATTATCTAAAACAAAGCTATC
TGTACAGCGACACCAAGCGGACGTAAGCGAGAAAATATGTCTTACTTGAAAACCCCACAC
TACGCTATGAATGGGCTTGGATTAGGACACGATATGAATTTGATCCACCCTTCAGTGACC
TATCCCGGCGATTCGGCTTGTTACTTCCAAAGATTACAAGTGCAAGGTCCTAAGAATTTG
CAATTCGGCGGAGGTCCGGTTTACAGCAACGCTAGAAAACAGCGAAGGGAGAGGACTACA
TTTACACGGGCGCAATTGGACGTATTGGAAGCTCTTTTTGCCAAAACTAGATACCCTGAC
ATCTTTATGAGAGAAGAAGTTGCATTGAAGATCAATCTTCCAGAATCCAGAGTACAGGTT
TGGTTCAAAAACCGACGTGCCAAGTGCCGACAACAACAACACCAACAGCAACAAAAACAA
CAAAAAAATAGCACCAGCTCGACTTCAAGCAGCAGCAGCAGTGGTAGCAACGCTAGCGCT
AAGAAGAAGAGTCCTCCAAGCACTCCCACCTCCACTAACCCAGCTCCTCCAAGTTCGGAC
CCACCCAGCAGCACTTCCCCATTCCAACAGAACCACATTAATACCAAAACATCTCCAGTG
CCATCTACTGGGTCTCCTCAAGAACCTTTGGCCAACGCTACAGCCCCAGTGGCTCCACTT
ATGGGACAATCTCACCCCGGACAAAATATGAGCGCGGTAAATAATGGACACACTACAACT
CCAGTCAATAACATCTGGAGCCCAGCCTCAGTCTCGCCCGGAGCTAGCAGTGACAATGGC
AGTCATGGATCAAATATGGCTCCTCTAAGCGGAGGACCAAGCATTCACGGATCTTGCATG
TCTACAGTGCCGTCTCACGGCAGCTCATTACACTCACCATATGGAATGCCAGCTAGCACA
CAAGTATCTGCTGGAAACGGATACTCACAATCTGCTTACGCTCCACAGTCGTACTTCGGA
AGCATGGAAGCGTCATACTTGCCACCAATGCAGTTTCCAGGACACAGCGCAGCCTCAATG
ACGTCACAGTCACACAACAATTTGTCAGCCCACCAACATCCAAGCCACGCCTCCCATGCT
AACCAGTTTATGTCTCAAAATCCGTACGCTTATTCTCACCACAACGGAACTGAATCTTCT
CTCAATACTTACAGTGGATCAGCCGATTGCGTGGATTATAAAGACTCCCAACCCCCAGCG
TGGCGATTTCACGACAGTAACCTTTTCGATCCAGCGATAGTTAGTGGTCCGCTACAAGGC
GTAACCGTGACAGAAAATATAGAATTCTACCAAGTAAAGATTCTGCGTCAAGTTCCCACT
ATAGAGATTAGTTAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[50-121] 4.71E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[60-120] 19.451 |
| SMART |
Homeobox_dom (IPR001356) - T[62-124] 1.2E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[63-119] 1.6E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[63-118] 7.30862E-24 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[95-118] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTX2_HUMAN | 39.356 % | 181 | 5.09E-54 |
| CRX_HUMAN | 33.168 % | 131 | 5.65E-35 |
| DMBX1_HUMAN | 37.853 % | 110 | 1.23E-26 |
