- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C14.525.v6...' >
- Transcript 'Mooccu.CG.ELv1_2.S26...' >
- Transcript 'Boleac.CG.SB_v3.S23....' >
- Transcript 'Moocci.CG.ELv1_2.S16...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S16766.g00095.01.t
Possible name(s)
COLEC12; ISLR; PKD1
Gene model
Location
S16766 [22,741 / 37,053]
Amino acid sequence
Length: 1,474
>Moocci.CG.ELv1_2.S16766.g00095.01.p
MSSTNAGSFMGDAGPLNDKGYPASNLRLKEEQYVRTKFQNDSKHHTRYDQEKTANISTIE
FNILIQFLQMMVSSLCNYNCAANLKYNLQRQFFKKKWIMLLFMMLLINATQGTPEEDCQE
SCPANCICSLGECSPKWAAILDKCCNKVNCTGRNSIPSSNTFPPLTSWFIAESSSILKIS
DFGNIRKILTLSYIQMQALVKLEKLDVSYNFISNIPKSTFKDMSRLKDLNLSFNKLSVLH
QDTFKNNRNLEKIGLNVLIEGSLTLGQNPWICNCDIEWVKDAALLNTYNIIILDYQQIIC
HEPNVLINQSLVDAKLDTARCAQSYVSCVYKQAQSASDYLKGFIVWEYTDPNENILHTNE
TCNDLCLANGYFYATVRIEDKSCLCASESSEDKIMNKDEKEWGDCMQACGDVIKSETNPE
RCGRKVLQSSIMRSSYDVKFSGIRTFSQEEEASISVIAKSSLNCSFIWNFNDSSPREVNF
ASKSITVKHKYAAAGVYYITVTVSVKEGEDVGKPMVQTYGTFLIVENPISNLNIICPDKI
SSQSTDNIRLSLSDGTSPRMDWKVKHKDEFIKNSYQEPPGSHYFSKTNMYYSVISSKEGP
WRAAQSECQKRKGDLVFISLQEVQDFLMNIKISDGIYWIGIMDKLSEGSYMHLDYQGSDN
KFSVTSVKYTNWNPGQPDDNHNFHSPPTSEDCVYLNVSSGSGFWYDDNCNSRHKFICQYS
SHETMNKPRHYVGGTAMFGKIPSLTVNISIQQQPNTNKNRYVVLFPETYIQNNGSLNSWE
FIDKEPSSFLRLQIYRPQCKDEIYKYLIHSPGCGDFLTNRTVCRKQPCANPAPYVECQNG
FYFCSLTRNCLAITDPCIAYRSPTVGDYKLPSYNLIKEYVTGTIGSSNVSAQLVVKGEVK
PNIRKHDVIGFGFESSFDLNSLTVKHFPIKCEKSELSVCVLPATNLQFVDLKKINKITYR
WRQDLYAMEVGEWISENSHLIYDIESTRNINSLWCYLRVQYSQSGVTSVPIASVVNMSNP
GLYEFYITAKNDVSTTEEKSCVIELTDAIKSIKLLNEVVTRNQPRLRSASTDSTEDVINV
PLNEGFPFSVEVNGGNNVKVNITTSEGKFYQAETVTVYNEDGSQEQVATAEIEVNTQSEV
TIQAKAYNEISARSLSVIARALKPITRLEILPAASDRIFVGVPITFKGNVSEGDNVQYEW
YVDGLTDFIHIGDSYLILFRLKGIYTLHLKAKNDVSEQSVSRDINVDNINLMTDLEFATP
PSLLVDINIDIDVTWEYNGVESKVKYLEPHPGLPPNNQIERVYLTVVKEFAFNTNGESQS
IKITAETEYGDSISEEHTINVRKPLSTITTSFNPNPGIKDEDVQCYNNFMSISIITIDVM
PSSDGSTFEIKWGDSSSKETSTLNTISHKYTTIGDKTVNIEACNDINCVDKTTSIRLYER
ITDIDEHTTYGWSCKVGALHIVGDKEVTDFAKKA
Nucleotide sequence
Length: 4,425
>Moocci.CG.ELv1_2.S16766.g00095.01.t
ATGAGTTCTACCAATGCGGGTTCTTTTATGGGTGACGCGGGTCCTTTGAATGATAAAGGT
TATCCTGCGAGCAATTTGCGTCTAAAGGAAGAACAATATGTAAGGACTAAGTTTCAAAAT
GACTCTAAACATCATACACGATATGACCAAGAAAAAACTGCAAATATTTCCACTATTGAA
TTCAACATATTAATCCAATTTCTTCAAATGATGGTTTCTTCACTGTGTAATTACAACTGT
GCTGCGAATTTAAAGTATAATCTTCAACGTCAGTTTTTTAAAAAGAAATGGATCATGCTA
TTATTTATGATGCTTCTAATAAATGCAACCCAGGGAACTCCAGAAGAGGATTGCCAGGAA
AGTTGTCCCGCAAATTGTATATGCTCATTAGGAGAGTGTTCACCCAAATGGGCCGCTATA
TTGGATAAATGCTGCAATAAGGTCAACTGCACAGGAAGAAACTCAATACCAAGTTCCAAT
ACCTTTCCTCCTTTAACTTCTTGGTTTATCGCAGAATCAAGTTCAATATTAAAAATTTCA
GACTTTGGAAATATTCGTAAGATTCTTACACTCTCATACATCCAAATGCAAGCTTTAGTT
AAGCTTGAAAAGTTGGATGTGTCATATAATTTCATAAGCAACATTCCAAAATCTACTTTC
AAAGACATGAGCAGACTTAAAGATTTAAATTTAAGTTTTAACAAATTGTCTGTTTTACAC
CAAGATACATTCAAAAATAATAGAAATTTGGAAAAAATAGGCTTAAATGTATTGATTGAA
GGGTCGTTGACATTAGGTCAGAACCCATGGATTTGTAACTGTGATATCGAATGGGTAAAA
GATGCAGCTCTTTTAAACACCTACAATATTATTATATTAGATTATCAACAAATTATTTGT
CATGAACCTAACGTACTTATTAACCAGTCGCTCGTAGATGCAAAGTTAGACACCGCCAGA
TGTGCACAATCTTATGTTTCCTGTGTATACAAGCAAGCCCAATCTGCCTCAGACTACTTA
AAAGGTTTTATAGTTTGGGAGTATACTGATCCTAATGAAAACATATTACACACCAATGAA
ACATGCAATGATCTCTGCCTAGCTAATGGTTACTTTTATGCCACTGTGAGAATTGAAGAC
AAATCCTGTCTATGTGCTTCAGAATCTTCTGAAGATAAAATCATGAATAAAGATGAAAAA
GAGTGGGGAGATTGTATGCAAGCATGTGGAGATGTTATCAAAAGTGAAACTAACCCAGAA
AGATGTGGACGAAAGGTTTTGCAATCTTCAATTATGAGATCAAGTTACGATGTCAAATTT
TCTGGAATAAGAACATTTTCACAAGAAGAGGAAGCAAGTATTTCTGTCATAGCCAAATCA
AGTCTTAACTGCAGCTTCATTTGGAATTTCAATGATTCTTCACCCAGAGAAGTCAACTTT
GCCAGCAAAAGCATTACTGTGAAACATAAATATGCTGCAGCTGGTGTTTATTATATTACT
GTCACTGTAAGTGTTAAAGAGGGTGAAGATGTTGGAAAACCAATGGTCCAAACATATGGA
ACTTTTTTAATAGTTGAAAATCCTATAAGTAATCTGAACATCATATGTCCAGATAAAATA
TCATCTCAAAGCACAGATAATATTCGATTAAGTTTATCGGATGGTACATCCCCGCGAATG
GACTGGAAAGTTAAACACAAAGACGAGTTTATTAAAAACTCATACCAAGAACCCCCAGGA
TCTCACTATTTTTCAAAAACAAATATGTACTATAGTGTAATTAGTTCCAAAGAAGGACCA
TGGAGAGCAGCGCAGAGTGAATGCCAAAAGCGAAAAGGAGATCTTGTATTTATTTCACTC
CAAGAAGTACAGGATTTCTTGATGAACATTAAAATATCAGATGGTATCTACTGGATTGGG
ATAATGGATAAATTAAGTGAAGGCTCTTACATGCATTTGGACTATCAGGGTAGCGATAAT
AAATTTTCGGTTACATCTGTTAAATACACGAATTGGAATCCAGGGCAACCAGACGATAAT
CATAATTTCCATTCGCCCCCTACTTCGGAGGATTGTGTTTACTTGAATGTGTCTTCAGGA
TCTGGATTTTGGTACGATGATAACTGCAACTCTCGACACAAGTTTATTTGTCAATATTCA
AGCCACGAAACAATGAATAAACCAAGACATTATGTTGGTGGTACAGCAATGTTTGGAAAA
ATCCCTTCATTGACTGTTAATATTTCTATTCAACAGCAACCAAATACTAACAAAAACCGA
TATGTCGTATTGTTTCCTGAAACATATATTCAAAATAACGGATCATTAAATAGTTGGGAA
TTTATAGACAAAGAGCCATCTTCTTTTCTAAGATTACAAATTTACAGACCGCAGTGTAAG
GATGAAATATACAAGTACCTGATTCATTCGCCAGGTTGCGGAGATTTTTTAACAAACAGA
ACGGTTTGTCGAAAACAACCATGTGCAAACCCAGCTCCATATGTAGAATGTCAAAATGGT
TTTTACTTTTGCTCTTTGACAAGAAATTGCCTGGCTATCACAGACCCCTGCATTGCATAT
AGATCACCCACAGTTGGAGATTATAAACTACCAAGTTATAATTTGATAAAGGAATATGTT
ACTGGGACAATCGGTTCATCAAATGTTTCTGCACAGTTGGTTGTGAAAGGCGAAGTAAAA
CCAAATATTAGAAAGCACGATGTAATTGGATTTGGATTTGAATCATCATTTGATCTGAAT
TCTCTAACAGTAAAACATTTTCCAATAAAATGCGAAAAAAGCGAACTAAGCGTGTGTGTA
TTACCAGCTACGAATCTGCAATTTGTAGATTTAAAAAAAATAAATAAAATCACTTACCGG
TGGAGACAAGACTTATATGCTATGGAAGTAGGCGAATGGATTTCAGAAAATAGTCACTTA
ATTTATGATATAGAATCTACCAGAAACATAAACTCACTTTGGTGTTATCTAAGAGTTCAA
TATAGTCAATCTGGTGTGACTTCCGTGCCCATAGCTTCTGTTGTAAACATGTCAAACCCT
GGATTGTATGAATTCTACATAACTGCTAAAAATGATGTTTCAACCACTGAAGAAAAATCT
TGTGTGATAGAACTTACTGATGCAATAAAAAGCATAAAACTACTGAATGAAGTTGTGACG
AGGAATCAACCAAGATTACGTTCGGCATCCACAGATTCAACAGAAGATGTGATTAACGTA
CCATTAAATGAGGGGTTTCCTTTTAGTGTTGAAGTAAATGGGGGAAATAATGTTAAAGTA
AATATCACAACATCCGAAGGAAAATTTTACCAAGCTGAAACTGTAACAGTTTACAATGAA
GATGGTAGCCAAGAACAAGTGGCTACTGCAGAGATTGAAGTAAATACTCAGAGTGAAGTT
ACGATACAGGCCAAAGCATACAATGAAATTAGTGCACGTTCTTTGAGTGTAATAGCTCGA
GCATTGAAGCCAATAACTAGATTGGAGATACTTCCAGCAGCATCTGATAGAATATTTGTT
GGCGTCCCAATAACATTTAAAGGAAATGTATCTGAGGGTGATAATGTTCAATATGAATGG
TATGTTGATGGTCTCACTGATTTTATCCATATTGGGGACAGTTATCTTATCCTATTTCGA
CTTAAAGGAATTTATACATTACATCTAAAAGCAAAAAATGATGTCAGTGAACAATCGGTT
TCAAGAGATATTAATGTTGATAACATAAACTTAATGACTGACCTGGAATTTGCAACACCT
CCTAGTTTACTTGTTGACATAAACATTGACATTGATGTGACATGGGAATATAATGGAGTT
GAATCAAAGGTAAAATATCTCGAACCACACCCTGGTCTGCCGCCAAATAATCAGATTGAA
AGAGTTTATCTTACTGTTGTTAAAGAATTTGCATTTAACACCAATGGAGAGTCTCAATCA
ATTAAGATAACAGCTGAAACTGAATATGGAGACTCAATTTCAGAAGAACATACAATCAAT
GTGAGAAAGCCATTGTCAACTATAACAACATCTTTTAATCCAAATCCAGGAATTAAAGAC
GAAGATGTTCAGTGTTATAATAATTTTATGTCAATATCGATAATTACTATTGATGTTATG
CCATCCAGTGATGGTAGTACCTTTGAAATCAAATGGGGAGATTCATCTTCTAAGGAAACT
TCAACATTAAACACGATTTCGCACAAATATACAACTATCGGAGATAAAACTGTAAATATA
GAAGCCTGTAATGATATAAACTGTGTTGACAAAACAACAAGTATTAGATTATATGAACGA
ATAACAGATATTGATGAGCATACAACTTATGGTTGGAGTTGTAAAGTGGGTGCTCTTCAT
ATTGTTGGTGATAAAGAAGTAACAGATTTTGCAAAAAAAGCTTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[186-326] 1.5E-23 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[199-222] 0.04 - T[223-246] 0.0094 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[201-255] 2.8E-12 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[201-222] 7.558 - T[225-246] 6.649 |
| Gene3D |
Ig-like_fold (IPR013783) - T[439-518] 9.8E-7 - T[1367-1437] 1.5E-6 |
| Pfam |
PKD_dom (IPR000601) - T[459-504] 1.5E-5 |
| SUPERFAMILY |
PKD_dom_sf (IPR035986) - T[463-507] 3.01E-6 - T[1175-1246] 1.96E-5 - T[1338-1437] 5.49E-6 |
| ProSiteProfiles |
PKD_dom (IPR000601) - T[465-504] 11.075 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[562-720] 2.7E-28 |
| SMART |
C-type_lectin-like (IPR001304) - T[577-718] 1.2E-24 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[578-727] 1.92E-27 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[591-718] 17.856 |
| Pfam |
C-type_lectin-like (IPR001304) - T[600-718] 2.9E-15 |
| ProSitePatterns |
C-type_lectin_CS (IPR018378) - T[692-717] . |
| Protein Name | Identity | Bit Score | e-value |
|---|