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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R0.1...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S6...'
  4. EST 'AHC0AAA222YA10_RM1'
  5. Transcript 'Moocci.CG.ELv1_2.S16...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S16766.g00094.01.t

Possible name(s)

PKD1; PKD2; PKD2L1

Location

S16766 [2,877 / 6,574]

Sequences

Amino acid sequence

Length: 849

>Moocci.CG.ELv1_2.S16766.g00094.01.p
VVLLAIFLAMITKPVNPDENDNLVEKPVVEPFENVKNTRVRPPAGFALQQCKFQAKKSQR
LDKMLRNLALYSILLSSVAAVASWDKDKFAIFATKSINDAFFNTKFSLPFPVHEPKLMRN
KTFSDIRSTYDIEYWLSKIVAEKLFDRNDTTLDNQNINNDLFGAIRIRQQRTSYVPCPIN
NDLAHNPGGLTEINKNCLTTDQSRQITDNDSDWGPWVYTPSRLPGVLYWGENHAYDDGGY
SLFIPANTTVIGMKQMVHSLFSNNWIDRPTIFVAMFEIGVTGAVTPSHNVNIVRLFVPSS
GVYVDMIFMGMIGIITLLLLFNELRKINNKKITFSIYFEKFTNWINLLVIGLLVTLCVLF
VYKEVYMEEVMQSYISNKERFTNFYKIAFYANLVTYTASVLLTVLIIRAVRLFRLFRCWS
VFGTTITASAKHLVISTFMLITLILTYAMLGYLIYGQNYTHVVADFNDFPNSIYAMFRAF
RGRLELHHLFAAILINEYKFARIKMKRPSFSVPDYEIKDYCITRIKLRLGIIKPKQFRPT
VRFEGMSTPSSRGSFASLDSFDTCFNPGRISQFSNASGFSSSSSDSGLGTPSDHSISIFD
YLTHDPPTDTPLDPLHLDYLYDRLSSYSVDMMLKRFERVNELSDDVLGQELNLLSVTDQI
KQRKKMQEQSQEIALAASSTTIRAKFSPGSSSSQFGGSLESRVGLSTTSLNSRSRSVLSG
DSMLQTVINSMFPSEPQPKRTAYRSSSYAGPSNSDKRNFNRDTVSDDGAILLSAESSRSN
KIHNKQEKLVKQRPHSDEGTRLTTTSIISQAQQSRKSLNDITKGKSTKSKIETKQKPKSN
INPLSKRSA

Nucleotide sequence

Length: 2,547

>Moocci.CG.ELv1_2.S16766.g00094.01.t
GTGGTTTTATTGGCTATCTTTTTGGCAATGATAACAAAACCTGTAAATCCAGATGAAAAT
GATAATTTAGTTGAAAAACCTGTTGTGGAACCTTTTGAAAATGTAAAGAACACAAGAGTA
CGACCACCTGCAGGATTTGCATTACAACAATGTAAATTTCAAGCAAAGAAATCACAAAGA
TTGGACAAAATGTTACGGAACCTGGCATTGTATTCTATATTACTTTCCTCTGTAGCTGCT
GTTGCATCTTGGGATAAAGACAAGTTTGCAATATTTGCAACAAAATCCATAAATGATGCA
TTTTTCAATACAAAATTTTCACTGCCTTTTCCTGTTCATGAACCCAAACTAATGAGGAAT
AAAACATTCTCAGATATCAGATCCACTTATGACATCGAATATTGGTTAAGTAAAATCGTA
GCAGAAAAACTTTTTGATCGAAATGACACAACTCTTGATAATCAAAATATAAATAATGAT
TTGTTTGGAGCAATTAGAATTCGACAACAGAGGACGTCTTATGTTCCTTGCCCAATAAAC
AACGATCTTGCTCATAATCCAGGTGGCCTTACAGAAATAAATAAAAATTGTCTAACAACA
GATCAATCAAGACAAATTACAGACAATGATTCTGATTGGGGACCTTGGGTATACACTCCT
TCAAGGCTCCCAGGGGTTCTTTATTGGGGTGAAAATCATGCATATGATGATGGAGGATAT
TCATTATTTATTCCAGCAAACACAACTGTTATAGGAATGAAGCAAATGGTTCATTCATTG
TTTTCAAATAATTGGATAGATAGACCAACAATTTTTGTGGCTATGTTCGAAATTGGAGTA
ACTGGAGCCGTAACTCCTTCACATAATGTAAATATTGTGCGGTTATTTGTCCCTAGCTCT
GGAGTGTATGTTGATATGATATTTATGGGTATGATAGGAATAATAACACTTTTGTTGCTT
TTCAATGAGTTGAGAAAAATCAACAACAAGAAGATAACGTTTTCTATCTACTTTGAAAAA
TTTACAAATTGGATCAATTTATTAGTAATTGGATTATTGGTTACTCTTTGTGTGCTATTT
GTGTATAAGGAGGTTTACATGGAAGAAGTTATGCAAAGCTATATCTCCAATAAAGAACGG
TTTACAAATTTTTACAAAATTGCATTTTACGCTAATCTTGTAACATACACAGCATCGGTG
CTTCTTACTGTACTTATAATACGCGCTGTACGTTTATTTCGCTTATTCCGCTGCTGGTCT
GTTTTTGGCACAACTATTACTGCATCAGCTAAACACCTAGTGATTTCTACATTTATGCTA
ATAACATTAATTTTAACATATGCTATGCTTGGATATCTGATTTATGGACAAAACTACACT
CATGTTGTAGCTGACTTTAATGATTTTCCCAATTCTATTTATGCGATGTTTCGAGCTTTC
AGGGGACGTTTAGAACTACATCATTTATTTGCTGCAATCCTGATTAATGAATATAAATTT
GCGAGGATAAAAATGAAACGACCATCATTCTCAGTTCCTGATTATGAAATCAAAGACTAC
TGCATCACAAGAATTAAGTTGAGATTGGGAATCATTAAACCAAAACAGTTTCGGCCAACT
GTTAGATTTGAAGGTATGTCAACACCTTCTTCACGAGGTTCATTTGCATCATTGGATTCA
TTTGATACCTGTTTTAATCCTGGAAGAATATCTCAATTCTCAAATGCTTCTGGTTTCTCA
TCATCCTCGTCAGATTCCGGTCTTGGAACACCTTCAGATCATTCCATTTCCATATTTGAT
TATTTAACACATGATCCACCCACTGATACACCATTAGATCCTTTGCATCTTGACTATCTT
TACGACAGACTATCCAGTTATTCTGTTGACATGATGCTTAAAAGATTTGAACGAGTTAAT
GAACTCAGTGATGATGTATTAGGACAAGAACTAAACCTGTTATCTGTAACTGATCAAATA
AAACAAAGAAAGAAAATGCAAGAACAATCTCAAGAGATCGCTCTTGCTGCGTCTAGTACA
ACCATCCGCGCTAAGTTTTCACCAGGGTCTTCATCAAGTCAATTTGGTGGTAGTCTTGAA
AGTCGTGTTGGGTTGTCAACCACAAGTCTCAATAGTCGAAGCCGTAGTGTTCTTTCTGGA
GATTCAATGCTACAAACTGTAATAAATAGTATGTTTCCTTCTGAACCTCAACCAAAAAGA
ACTGCTTATAGGAGCAGCTCATATGCTGGACCATCAAATTCCGATAAAAGGAATTTTAAT
CGGGATACTGTCAGTGACGATGGTGCTATTTTATTATCAGCAGAATCTTCTCGAAGCAAT
AAAATACATAATAAACAAGAAAAACTAGTTAAACAAAGGCCTCACAGTGATGAAGGTACA
AGACTAACTACAACCTCTATTATTAGTCAAGCACAACAAAGCCGTAAATCTTTAAATGAC
ATCACTAAAGGCAAATCAACAAAATCGAAAATTGAAACAAAACAAAAACCTAAGTCAAAC
ATTAACCCCTTATCTAAACGAAGTGCA

InterProScan

Pfam
PKD1_2_channel (IPR013122) - T[121-489] 7.5E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PKD2_HUMAN 24.839 % 89.4 3.85E-18