Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S146828.g02564.01.t

Possible name(s)

RRP7A

Gene model

Moocci.CG.ELv1_2.S146828.g02564

Location

S146828 [33,418 / 34,231]

Sequences

Amino acid sequence

Length: 270

>Moocci.CG.ELv1_2.S146828.g02564.01.p
MNNKCNFPSGFHQVEVKFGNSCDHGHFLFYKQHSSKKIEDSKPQERSIIVFNVPPYLNKK
HMHEIFDQFGKIDSVIFENKISNLEESAPVVKEKTKEDLYFFSTLKCGFKTSFVVFKNKI
SINNLMKQSLSPITCSGGITGIKKWCKEYKKSYPDVEKLKINIDNFMARHDQIIHEQEAL
EKESAGLPDEDGWVKVTRKGNVPVAARTELNETLLKAKANRKKKSQELLNVYTFQIRESK
REQIAELRKKFEDDKEKIKQMRESRRFKPF

Nucleotide sequence

Length: 813

>Moocci.CG.ELv1_2.S146828.g02564.01.t
ATGAACAATAAATGTAACTTTCCTTCTGGATTTCACCAAGTTGAAGTAAAATTCGGCAAC
TCTTGTGATCATGGTCATTTCTTATTTTATAAACAACATTCCTCTAAAAAAATAGAAGAT
AGTAAACCTCAAGAAAGATCAATCATAGTGTTTAATGTTCCACCATATTTAAATAAAAAA
CATATGCATGAAATTTTTGATCAGTTTGGCAAAATTGACTCGGTTATTTTTGAAAATAAA
ATTTCAAATTTAGAGGAGTCTGCTCCTGTCGTAAAAGAAAAAACAAAAGAAGACTTGTAT
TTTTTTTCTACTTTAAAATGTGGATTTAAAACAAGTTTTGTAGTTTTTAAAAATAAAATA
AGTATTAACAATTTAATGAAACAGAGTTTATCACCCATTACATGTTCTGGTGGAATTACA
GGAATTAAAAAATGGTGCAAGGAATATAAGAAATCATATCCAGACGTGGAAAAATTAAAA
ATAAATATAGATAATTTTATGGCCAGACATGATCAAATTATTCATGAACAGGAAGCTTTA
GAAAAGGAATCTGCTGGGTTGCCTGATGAAGATGGTTGGGTGAAGGTTACCCGGAAAGGC
AACGTTCCTGTGGCAGCACGGACAGAATTAAATGAAACATTACTAAAAGCAAAAGCAAAT
AGAAAAAAGAAATCACAAGAGTTATTAAATGTTTATACTTTCCAAATTAGAGAATCCAAA
CGTGAACAAATAGCGGAACTAAGGAAAAAATTTGAAGATGACAAAGAAAAAATTAAGCAA
ATGCGAGAATCAAGACGATTCAAACCATTTTGA

InterProScan

PANTHER	RRP7 (IPR024326) - T[3-270] 8.4E-65
SUPERFAMILY	RBD_domain_sf (IPR035979) - T[25-77] 2.69E-6
Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[29-166] 6.9E-7
Pfam	RRP7 (IPR024326) - T[141-270] 1.8E-37

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RRP7A_HUMAN	36.765 %	168	4.71E-51
RRP7B_HUMAN	50.962 %	93.6	2.67E-24