Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S115681.g01829.01.t

Possible name(s)

ACTL6A; ACTL6B; ACTR1B

Gene model

Moocci.CG.ELv1_2.S115681.g01829

Location

S115681 [349 / 2,914]

Sequences

Amino acid sequence

Length: 436

>Moocci.CG.ELv1_2.S115681.g01829.01.p
MSGGVYGGDEVGAIVIDVGSNTVRAGYAGEDCPKAEFFTHIGCESIEEKMETEDSESGNK
KTDMNKRYHFDVTDMFVPRKNTEIVTPMKDCMIEDWDLYETMLDYVYKRHVRSSSELHPV
LMSEPAWNIRNKREKLTELMFEKYNVPAFFLCKSPVLSAFANGRATGIVLDSGATHTTAT
PVHDGYVIQQGIVKSPLGGDFVNMQCREMLKAMDIEVIPAYMIQSKETVQEDCPAKWEKK
KNLPEVTKSWSSFMIDYTVKDLVSSILQVSDTPYKEEDAISMPHVHYGFPNGFHKDFGHE
RWRAVEGLFDPSIIQGNSMLGVSHVVSSAVGLCDADLRPGLYNSVIVSGGNSLLQGYTDR
LTFELSSKTPPNMRLKIIAPQNPVERKYSPWIGGSILASLGTFQQMWISKQEFEEAVEAM
AQLLMLKYQLGQPKIY

Nucleotide sequence

Length: 1,342

>Moocci.CG.ELv1_2.S115681.g01829.01.t
GTATAGCTATATTAAATTTGTAAGAAACAAAATGAGTGGTGGTGTTTACGGCGGTGATGA
AGTAGGGGCGATTGTGATAGATGTCGGTTCCAACACTGTACGTGCGGGTTATGCCGGAGA
AGATTGTCCCAAAGCGGAGTTCTTTACACACATTGGATGTGAAAGTATTGAAGAAAAAAT
GGAAACTGAAGACTCTGAAAGTGGCAACAAAAAAACAGACATGAACAAAAGATATCACTT
TGATGTCACCGATATGTTTGTACCTCGCAAAAATACTGAAATTGTTACACCGATGAAAGA
CTGCATGATTGAAGATTGGGATCTCTATGAAACAATGCTAGATTATGTTTACAAAAGACA
TGTTAGGAGTTCATCTGAATTACATCCTGTTTTAATGTCAGAACCTGCTTGGAACATAAG
AAATAAAAGAGAAAAATTGACAGAACTCATGTTTGAAAAATACAATGTGCCAGCATTCTT
TCTGTGTAAATCACCGGTGTTGTCTGCGTTTGCCAACGGAAGAGCAACTGGCATAGTCTT
GGATAGTGGCGCAACTCATACTACGGCAACACCAGTACACGATGGTTATGTAATTCAACA
AGGAATAGTAAAATCTCCTCTGGGCGGAGACTTTGTGAATATGCAATGCAGAGAAATGCT
AAAAGCTATGGATATAGAAGTCATTCCTGCTTATATGATTCAATCTAAAGAAACAGTACA
GGAGGATTGTCCAGCAAAGTGGGAAAAGAAAAAAAATCTTCCAGAAGTTACAAAATCATG
GAGCAGTTTCATGATAGATTACACAGTTAAAGATTTGGTTTCATCAATTTTGCAAGTTTC
AGATACACCTTATAAAGAAGAAGATGCCATTTCAATGCCCCATGTTCATTATGGATTTCC
AAATGGTTTTCATAAAGACTTTGGACATGAACGATGGCGTGCAGTTGAAGGTCTGTTTGA
TCCTTCCATTATCCAGGGAAATTCGATGCTTGGTGTTTCCCATGTTGTATCATCGGCTGT
TGGTTTATGTGATGCAGATTTAAGGCCTGGTTTATACAACAGTGTCATAGTTTCAGGTGG
AAATTCACTTTTACAGGGGTATACAGACAGATTGACCTTTGAGCTTTCAAGTAAAACGCC
ACCAAACATGCGGTTAAAGATTATAGCCCCCCAGAACCCAGTGGAGCGAAAATACTCTCC
CTGGATTGGAGGATCAATTTTGGCATCACTGGGAACATTTCAGCAAATGTGGATTTCCAA
GCAAGAATTTGAAGAGGCTGTTGAAGCAATGGCACAACTTTTAATGTTGAAATATCAGCT
AGGGCAGCCTAAAATATATTAG

InterProScan

PANTHER	Actin (IPR004000) - T[1-416] 6.6E-178
Pfam	Actin (IPR004000) - T[8-416] 1.4E-129
SMART	Actin (IPR004000) - T[11-431] 3.9E-122
PRINTS	Actin (IPR004000) - T[78-100] 5.8E-9 - T[132-145] 5.8E-9 - T[157-176] 5.8E-9
ProSitePatterns	Aspartic_peptidase_AS (IPR001969) - T[168-179] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ACL6A_HUMAN	62.291 %	565	0
ACL6B_HUMAN	62.53 %	559	0
ACTY_HUMAN	34.474 %	220	8.8E-68