- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Transcript 'Moocci.CG.ELv1_2.S58...' >
- Transcript 'Moocul.CG.ELv1_2.S85...' >
- Transcript 'Moocci.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S113689.g01779.01.t
Possible name(s)
COL7A1; TNN; TNR
Gene model
Location
S113689 [242 / 12,825]
Amino acid sequence
Length: 908
>Moocci.CG.ELv1_2.S113689.g01779.01.p
MKILRNGDYKAFALKYKFNWFPYAMLKVKIIRLIPSISICYAKGQDYTIDTFKLFCPARC
ARNQEHVYGTREYTDKKRNHTATGKLIDSYICAAAVHDGRVDDNVGGEVTVKRRPGLPHY
VGTTQNGVISKNYGSWHKSFVFGNYGSWHKSFVFALQAPENLRIVPTSISHNTITIEWDP
VKGAEAYRVTVEPDLGVSGAVPGITGTRTTLGNLKADFEYRIYVTATNTLEHSEAAIITQ
FTPLPKPLNLKVVSNSVTHDRFNITWLPVAGSSHYLIRIETDGVNIREETTKLSFVVDGM
PSGSMITVGVSAVNDVGLGEENTISQYTTTQKMNATRRTEDPFIWLEDLSPDTIYDVRVQ
AENGNERSRSVTVKQRTALGAPLNLKIVRLTHDTVTVTWDKMKNADSYYVTIMSYDNQFG
ANDERNTNTFTATGLTGRSEYKISVLGRNEIGDGRPDSIGVTTCNIQQPNNKVAWLCLMS
PRPNSIPIDGREMISPPRDLRIHGKSLNADQVQITWEQLHGATGYMVIVTPPAGLKSSVK
YQIYVSALIGVEEGMNATTSFVTGLPAPENVRAPEDQITSRSVVVEWDVVILADYYRVTL
KDMGTREKTVFNEIYNATVTINKLRPKTEYQITVNSMEAAQDETGGLEEASLGTSIKVLT
RVLIEVPGGVKITEKADTTVTVSWFTVGSANTYEVYAVPRDGVEGTGNYTEPPAVLTNMD
PETEYEIYVFGVDNVLNVSSLPAYLTVIPGDTAQETTASTNMFDFTPEPNNTDMFGGDYD
NNRKVEEVPVEKEPKKWVIIVIIVAAILLILLFAVIPCICDCCHNKPILKFHGCCGCCAG
CSDYGCCACRGCCPGGGVKHDMLPKNQSYASTVEQPRRQLFLCFNLLLKQVDAQIRFITK
LKNKFNTF
Nucleotide sequence
Length: 2,724
>Moocci.CG.ELv1_2.S113689.g01779.01.t
ATGAAGATCTTAAGGAATGGTGATTACAAAGCATTTGCGTTGAAATACAAATTTAACTGG
TTTCCATATGCTATGCTAAAGGTCAAGATTATACGATTGATACCTTCAATTTCCATATGC
TATGCTAAAGGTCAAGATTATACGATTGATACCTTCAAATTATTTTGTCCAGCAAGATGC
GCTCGAAACCAAGAACATGTTTACGGAACCAGAGAATATACTGATAAAAAAAGAAATCAT
ACAGCAACCGGAAAACTTATTGATTCTTACATATGCGCAGCTGCCGTACACGACGGACGC
GTCGATGACAATGTTGGAGGGGAGGTCACCGTAAAAAGGCGACCAGGTCTCCCCCATTAT
GTTGGAACAACTCAAAATGGTGTCATTTCCAAAAATTATGGTTCATGGCACAAATCATTT
GTATTTGGTAATTATGGTTCATGGCACAAATCATTTGTATTTGCACTTCAAGCACCAGAG
AACTTAAGAATTGTTCCAACCTCTATTTCTCACAATACAATTACTATTGAGTGGGACCCC
GTGAAAGGGGCTGAGGCCTACAGAGTTACTGTGGAACCCGACTTAGGAGTAAGTGGAGCA
GTTCCCGGTATAACAGGTACAAGAACAACCCTTGGCAACTTGAAAGCAGATTTTGAGTAC
AGGATTTACGTTACTGCTACGAACACCTTGGAACACAGCGAAGCTGCTATCATTACACAG
TTTACACCGCTGCCCAAACCTTTGAACTTGAAAGTGGTATCAAACTCAGTTACGCATGAC
CGATTTAATATCACGTGGTTGCCAGTAGCAGGAAGTTCACATTATCTCATCCGTATCGAA
ACTGATGGAGTAAATATTAGGGAAGAAACTACTAAACTATCTTTTGTTGTCGACGGAATG
CCAAGCGGTTCAATGATAACAGTTGGAGTTAGCGCTGTAAATGATGTTGGACTGGGAGAA
GAAAATACCATCAGTCAATATACAACAACCCAGAAAATGAACGCCACCAGACGAACTGAA
GATCCGTTTATTTGGCTGGAGGATTTGTCGCCTGATACAATTTATGACGTCAGAGTTCAA
GCAGAAAACGGAAATGAAAGAAGCAGATCGGTTACTGTCAAACAAAGAACAGCACTAGGA
GCACCACTAAATCTTAAGATTGTTCGTTTGACTCACGATACCGTAACTGTGACATGGGAC
AAAATGAAAAACGCTGACTCATATTACGTCACAATTATGTCGTACGATAATCAATTTGGC
GCAAACGACGAAAGGAACACGAATACATTCACTGCTACAGGTCTAACGGGTCGAAGCGAG
TACAAGATATCTGTTCTGGGGCGAAATGAAATAGGCGATGGGAGGCCCGATTCTATAGGG
GTGACAACTTGTAACATACAACAACCGAACAACAAAGTGGCCTGGTTGTGCCTTATGTCA
CCGAGACCGAACAGCATCCCAATAGACGGACGAGAAATGATTTCACCTCCAAGAGATTTA
AGAATTCACGGCAAGAGTCTCAATGCAGATCAAGTACAGATTACATGGGAGCAGCTACAT
GGTGCAACCGGGTATATGGTCATTGTAACACCACCTGCTGGTCTAAAATCAAGTGTGAAG
TACCAGATATATGTGAGTGCTTTGATTGGAGTGGAAGAGGGTATGAACGCTACAACAAGT
TTTGTGACCGGGTTGCCAGCACCTGAAAACGTCCGAGCGCCCGAGGACCAGATCACATCC
CGCAGTGTGGTTGTGGAATGGGATGTTGTGATATTGGCAGATTACTACAGAGTCACTCTT
AAAGATATGGGAACTCGAGAAAAGACAGTGTTTAACGAAATTTATAACGCCACTGTTACC
ATAAACAAACTTCGTCCAAAAACCGAGTACCAGATAACCGTCAACTCGATGGAAGCGGCT
CAAGATGAAACGGGGGGATTAGAAGAAGCGTCTCTCGGAACATCGATTAAAGTTTTAACA
CGTGTACTAATCGAAGTACCAGGCGGGGTAAAGATAACAGAGAAAGCAGATACCACTGTT
ACTGTAAGTTGGTTCACGGTCGGTTCAGCCAATACATATGAGGTGTACGCAGTTCCACGA
GATGGCGTAGAAGGGACGGGGAATTATACAGAACCACCAGCGGTATTAACCAACATGGAC
CCAGAAACTGAATACGAAATATATGTATTTGGAGTCGATAATGTATTAAACGTCAGCAGT
CTTCCTGCTTATTTGACTGTCATACCTGGAGACACAGCACAAGAAACAACCGCTTCGACA
AATATGTTTGATTTCACTCCAGAACCTAACAACACGGACATGTTTGGGGGGGATTACGAC
AACAATAGGAAAGTGGAGGAAGTTCCAGTGGAAAAGGAGCCAAAGAAATGGGTTATAATT
GTGATCATAGTGGCCGCAATACTGCTCATACTCCTCTTTGCGGTTATACCCTGTATTTGC
GATTGTTGCCATAACAAACCTATTTTAAAATTTCACGGATGTTGTGGATGTTGTGCAGGA
TGCAGCGATTACGGATGTTGTGCTTGTAGGGGATGTTGTCCAGGAGGCGGAGTCAAACAT
GATATGTTACCTAAGAACCAATCATATGCTTCCACGGTTGAGCAACCACGGAGACAGCTT
TTTCTTTGCTTTAATCTATTACTAAAACAGGTTGACGCTCAAATCCGATTTATCACAAAA
CTTAAAAACAAGTTCAACACATTT
| ProSiteProfiles |
LCCL (IPR004043) - T[34-140] 21.228 |
| Gene3D |
LCCL_sf (IPR036609) - T[35-145] 2.6E-23 |
| SMART |
LCCL (IPR004043) - T[36-131] 2.7E-6 |
| SUPERFAMILY |
LCCL_sf (IPR036609) - T[40-142] 9.81E-21 |
| Pfam |
LCCL (IPR004043) - T[47-140] 4.3E-16 |
| Gene3D |
Ig-like_fold (IPR013783) - T[154-241] 1.8E-10 - T[242-331] 1.0E-8 - T[332-378] 6.2E-6 - T[379-473] 5.4E-12 - T[563-654] 3.4E-8 - T[663-748] 3.0E-6 |
| SMART |
FN3_dom (IPR003961) - T[156-233] 2.0E-4 - T[244-370] 2.5E-6 - T[379-454] 6.9E-8 - T[494-554] 2.6 - T[565-643] 0.0088 - T[664-739] 0.0053 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[158-331] 6.02E-15 - T[340-459] 3.3E-16 - T[492-563] 5.58E-6 - T[577-735] 2.64E-12 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[158-247] 13.484 - T[248-332] 9.484 - T[381-469] 12.158 - T[567-658] 9.981 - T[666-755] 9.981 |
| CDD |
FN3_dom (IPR003961) - T[158-242] 9.24506E-8 - T[245-329] 2.66198E-4 - T[380-463] 7.61001E-7 - T[566-634] 3.81428E-5 - T[667-734] 5.87031E-4 |
| Pfam |
FN3_dom (IPR003961) - T[381-456] 4.9E-6 - T[566-638] 8.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|