- Transcript 'Moocul.CG.ELv1_2.S99...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S99657.g08730.01.t
Possible name(s)
COL1A2; COL2A1; EDA
Gene model
Location
S99657 [13,498 / 16,707]
Amino acid sequence
Length: 370
>Moocul.CG.ELv1_2.S99657.g08730.01.p
MNMAEKENLHQQEHSLFDYEKNQTSNNAKKKLSSPRLARIFQRKYYLSLSCILMSALLFL
FSICFGAALLVKLSSEISQLKSDFLDLQAEVDRSAGINTVALAEHGYELVQNSDSTINDD
EDALLWLNQLTSEDVSKLATPRVKREVTGFAQAQNTKSDKRGKRQAVRGPPGRDGRDGRD
GAKGPMGPPGIQGSPGKSIIGPQGSAGPPGIQGVPGLQGERGQIGPPMTFDVIHIHGDGS
SGVRSSENGLLTHWMEDWSTNSNYLLFPHNGTLQVLSGGIYFIYSQILAVNSGTSYTSHE
MKVNGKTFLRCKRSARVSTCFTSGVRKLNKNDNVYVVMTYPETQVDMLKDDSFFGLVKWS
DENGHTNDEL
Nucleotide sequence
Length: 1,882
>Moocul.CG.ELv1_2.S99657.g08730.01.t
AAGTTATCAAAATTTTAGTTATTTATCTGTTTATGTAGAATAGTTATTAGTTATATTTGA
TTCACTCAATATTGGTGTATTTTTCAAGACAATACTGGGCTGTAGGCACGTACCGACACC
GTATCGCCCTTGTGTGTTCAAATGGTGAAATGAATATGGCTGAAAAGGAAAATTTACACC
AACAAGAACATTCTCTCTTTGATTATGAGAAAAACCAAACAAGCAACAATGCAAAGAAGA
AGTTGTCTTCACCTCGTCTTGCTCGAATATTTCAAAGAAAATATTATTTATCACTGTCAT
GCATTTTAATGAGTGCTCTTCTATTTCTTTTTTCAATCTGCTTTGGTGCTGCACTGTTGG
TAAAATTATCATCTGAAATATCTCAACTGAAATCAGATTTTCTTGATCTTCAAGCAGAAG
TGGATCGTTCAGCTGGTATAAACACTGTTGCATTAGCCGAACATGGCTACGAACTTGTTC
AAAACAGTGACAGTACTATTAATGATGACGAAGACGCGCTTCTTTGGTTAAATCAATTAA
CTTCTGAAGATGTCAGCAAGTTAGCGACACCTCGTGTAAAAAGAGAAGTTACAGGATTTG
CTCAAGCGCAAAACACAAAGTCCGATAAGAGAGGCAAACGACAAGCTGTTCGAGGTCCAC
CTGGTAGAGACGGCAGAGATGGTAGGGATGGCGCCAAAGGACCAATGGGGCCACCTGGTA
TACAAGGTTCACCTGGGAAGTCCATAATTGGGCCACAGGGGAGTGCTGGTCCGCCTGGTA
TTCAAGGCGTTCCGGGTTTACAGGGAGAAAGAGGACAGATAGGTCCACCAATGACATTTG
ACGTTATTCATATTCATGGAGATGGTTCTTCTGGTGTCCGGTCAAGTGAAAATGGACTTT
TAACACATTGGATGGAAGACTGGAGTACCAATTCAAACTATTTACTGTTTCCACATAATG
GCACACTTCAAGTTTTATCTGGTGGCATTTATTTTATTTACAGCCAGATACTTGCTGTTA
ATAGCGGAACATCCTACACAAGTCATGAAATGAAAGTTAATGGTAAAACTTTTCTCCGCT
GTAAAAGAAGTGCACGAGTTAGCACCTGCTTCACTTCAGGTGTTCGTAAATTGAACAAAA
ATGACAATGTATATGTTGTCATGACATATCCTGAGACTCAAGTTGATATGCTCAAAGACG
ATTCGTTTTTTGGACTCGTTAAATGGTCAGACGAAAATGGCCATACAAATGATGAGCTTT
GATCATTTTTCATGCTGCTAAAACGTCTAAACTGTGCTCTTATTTTGTAGGAATATTCTC
GTTTTTTTTATAAATATCCATACTGATGATTTCCTTTTTTTATAAATATTTGAATGTCTC
ATGTCAACAACTTTTTTTCTACTTATTTCATGTATTTTTTTTTCTTACTGCCAAGACATT
CTTATTCTCACTGCCTACATATATGCAAAAGTTGCTTAGATTTATCCATATTTTTACGGT
TTTTGTACCAAAATTTTTACATTTGTGTAACAAATTTCCAGTTTTTTTAACGATTACACG
ACACATATTTTATGTTGCATTTGAACAATCATGAACTTTTTAGTTTGTTTGGTACCGAAA
TGAATATTGTATATTTTAATTCCATTTATCAATTTACACATTCAGCAACTTTCATGTGTT
TTTATGTTTGTTTTATTTTTACAGTTGGAAGCAGTAATTGTTAATGAAATTGTATATTTG
GGTGCTGTCTAATGGAAACTGTGCTGTTTTTTAATTCCTGTGCATTCAAAATACTTCTTG
TTCCATATTTTACGTACTGGTTGTTAAAATAAAGTGTTACTGTTCCATTTAATGTGTTAG
TTTTCTTTAATACAAAGCGAAA
| Pfam |
Collagen (IPR008160) - T[169-227] 3.3E-9 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[231-363] 2.8E-24 |
| ProSiteProfiles |
TNF_dom (IPR006052) - T[232-358] 9.211 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[249-360] 5.85E-21 |
| Pfam |
TNF_dom (IPR006052) - T[254-358] 1.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|