Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S97617.g08289.01.t

Possible name(s)

RNF139; RNF145; SYVN1

Gene model

Moocul.CG.ELv1_2.S97617.g08289

Location

S97617 [23,647 / 27,720]

Sequences

Amino acid sequence

Length: 486

>Moocul.CG.ELv1_2.S97617.g08289.01.p
MDIDDNPSYGIRLTNAILRLPGLIFLECIISNTISAEIVLGNEDETLFVAGCVFSIVSNG
DKIINTTMEHIAFFQREIGGWPGLITVIWTKYEFGLMFTLYWFSKFIIHLSSNFANDDLK
MTITGSIMPVNVTVSINTISWLNWSLSDHPPDSIHVGIANLSDGLTILAMSIYTDLASAD
IESRILVLGYILLTVSSSQFPVFHTIIDETMMATLASPAATKKKHFRVMFALLFLLGICT
LVTFMMYYLLAIKKYQSLWLMVNSHNYFITFWLALGSVSIYLLTIADLKGNFQIYNVEDM
TFYVRGACRSIEYLENLGLCLYLMYVFYSEISSIPVVVLLGLYVYYSIAWKGKKAWNLLM
MRRHAASKVSSLKNPSVDELHTFDDVCPICYQDLNDSTYCKEMHCRHIFHENCLKKWFYV
RDQCPVCHAEFNKTPTTTTSDKETSMEANELHNESSSTTALRFRQHTSNSDTLDAVLEKP
SALDPT

Nucleotide sequence

Length: 1,461

>Moocul.CG.ELv1_2.S97617.g08289.01.t
ATGGATATTGATGATAATCCTTCATATGGAATTCGATTAACTAACGCTATTTTGCGTTTA
CCTGGTTTGATTTTCTTGGAATGTATCATATCTAATACCATCTCAGCGGAAATTGTACTT
GGAAATGAAGATGAAACACTTTTTGTGGCTGGCTGCGTTTTTAGTATCGTGTCAAATGGT
GATAAAATTATCAACACAACAATGGAGCATATCGCATTCTTCCAAAGAGAAATTGGTGGA
TGGCCTGGCTTAATAACGGTCATATGGACAAAATATGAGTTTGGCCTGATGTTTACACTG
TACTGGTTCTCAAAATTCATTATCCATTTGTCAAGCAACTTTGCCAACGATGATTTAAAG
ATGACGATAACCGGATCAATAATGCCAGTTAATGTTACTGTGAGCATTAATACAATATCT
TGGTTAAATTGGTCGTTATCTGATCATCCACCAGACAGTATCCATGTGGGTATAGCGAAT
TTGTCTGATGGTTTGACAATACTGGCCATGTCAATATACACTGACTTGGCAAGCGCTGAT
ATTGAAAGCAGAATACTGGTTCTTGGTTACATTTTATTAACAGTTTCATCATCGCAGTTT
CCTGTTTTCCACACTATAATTGATGAAACAATGATGGCAACATTAGCTTCACCTGCTGCA
ACTAAAAAGAAACATTTTCGAGTTATGTTTGCGCTTCTTTTTCTACTGGGAATATGCACA
CTTGTTACATTTATGATGTATTATTTGTTGGCAATAAAAAAATACCAATCTCTATGGTTA
ATGGTGAACTCACATAATTATTTTATCACCTTTTGGCTTGCTCTTGGGTCTGTTAGTATT
TATTTACTAACCATAGCCGATCTTAAGGGGAATTTTCAAATATATAATGTCGAAGACATG
ACTTTTTATGTCCGTGGGGCTTGCCGCTCCATAGAATACCTGGAAAACTTGGGCTTATGC
CTTTACCTAATGTACGTTTTTTATTCAGAGATTTCAAGTATTCCAGTTGTCGTATTGCTT
GGATTGTATGTTTATTATTCAATTGCATGGAAGGGTAAAAAGGCATGGAATTTACTGATG
ATGCGAAGACATGCAGCATCTAAGGTTTCTTCACTTAAAAATCCATCTGTGGATGAGTTG
CATACATTCGATGATGTTTGCCCAATTTGTTATCAGGATTTGAATGACTCGACATATTGC
AAAGAAATGCACTGCAGACATATATTCCATGAAAACTGTTTGAAAAAGTGGTTCTACGTG
CGGGATCAGTGTCCAGTTTGTCATGCGGAGTTTAATAAGACACCAACTACAACTACCAGC
GATAAAGAGACTTCGATGGAAGCTAATGAATTACACAATGAAAGTAGTAGCACCACAGCA
TTAAGATTCCGCCAACATACTTCGAATAGTGATACATTGGATGCAGTTCTGGAGAAGCCA
AGTGCATTGGACCCTACATAA

InterProScan

Pfam	TRC8_N_dom (IPR025754) - T[163-356] 8.5E-15
Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[376-446] 1.3E-14
Pfam	Znf_RING (IPR001841) - T[386-427] 1.1E-9
SMART	Znf_RING (IPR001841) - T[387-427] 2.8E-6
ProSiteProfiles	Znf_RING (IPR001841) - T[387-428] 12.179

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RN139_HUMAN	26.616 %	107	1.47E-24
RN145_HUMAN	25.581 %	125	7.81E-31