- Transcript 'Moocul.CG.ELv1_2.S94...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S94621.g07792.01.t
Possible name(s)
COL24A1; COL4A1; OTOL1
Gene model
Location
S94621 [23,917 / 27,589]
Amino acid sequence
Length: 747
>Moocul.CG.ELv1_2.S94621.g07792.01.p
MLKHKKNVRVRNGALLLVSKWFTIDMTGHIFAFLLLVISLIGHISAQDRILDGVKLSDTA
VVLPEEDHAELFLIDPTKPAHAQTEQSTEECTSNCDESSEQSTICENTFTSNTAACATSS
CCCCGGCGASASSTLILEAVSNMMQGPAGPQGVPGPAGASGINGNPGPPGMQGQTGQQGP
QGIQGALGPVGKGLKGDVGPCGPKGMPGNPGISIPGPKGERGPPGLPGKMDYEELKQAVT
TVSGPPGEPGPAGAKGEPGLSGLGLHGKDGLPGPAGPPGPPGLTISSDNGVIAEPGQKGE
PGPAGAKGEPGLSGLGLHGKDGLPGPAGPPGPPGLTISSENGVIAEPGQKGEQGEKGMTG
MGITGPKGDKGEIGIGLTGATGQDGQSIKGEPGMPGPPGPPGPSGDSTTIESGGLVNDER
NGKDGLAGERGPVGPTGEKGDKGMNGLAGVQGPTGPQGRAGIKGSTGSRGRPGVQGRQGI
RGLPGRSVTGQKGKSGASGEKGETGAGLPGPPGPPGPPGQTGSRGASGEKGETGAGLPGP
PGPPGPPGQTGSRGSDGGACCQEEKVAFMAGLSHNMQGNYDRIAFDKVLTNEGGAYNSVT
GCFIAPAAGIYVFHMHILRCQNGGPLFAHLMKNSEMISSGTNQDIKYETTSTSAVLVLKK
CDVVWVRLRQGVAYGHSPSHYTSFSGFSLSLQEAIDTSAYARADTTLASFPLRRKSPRAA
LTMLFVKRCLYSAQGADQPVQHLRREQ
Nucleotide sequence
Length: 2,244
>Moocul.CG.ELv1_2.S94621.g07792.01.t
ATGTTGAAACACAAGAAAAACGTGCGAGTCCGCAATGGGGCGTTGCTATTAGTAAGTAAA
TGGTTTACCATTGATATGACTGGTCATATATTTGCATTTCTGCTGTTGGTCATTTCGTTG
ATTGGTCACATTTCGGCGCAAGACAGGATACTAGATGGGGTCAAACTAAGCGACACTGCC
GTCGTATTGCCGGAGGAAGATCATGCGGAATTATTTTTAATCGATCCAACAAAACCAGCC
CATGCACAAACGGAGCAATCTACGGAAGAATGTACTTCAAATTGCGACGAAAGTTCCGAA
CAAAGTACGATATGCGAGAACACTTTCACAAGCAATACTGCCGCATGTGCGACATCAAGC
TGCTGTTGCTGTGGGGGTTGTGGTGCGTCGGCGTCTAGTACACTTATATTGGAAGCTGTC
AGCAATATGATGCAAGGACCTGCTGGTCCTCAAGGAGTCCCAGGACCAGCTGGAGCTTCC
GGAATTAATGGCAACCCTGGACCGCCTGGGATGCAGGGACAAACAGGCCAGCAAGGACCA
CAAGGAATTCAGGGAGCTCTTGGGCCAGTCGGAAAAGGTTTAAAGGGCGACGTTGGTCCA
TGTGGCCCAAAAGGAATGCCTGGAAATCCAGGAATTAGCATTCCAGGGCCAAAAGGAGAA
CGCGGTCCGCCAGGATTGCCAGGGAAAATGGATTATGAAGAACTAAAGCAAGCTGTCACA
ACAGTATCGGGACCACCAGGAGAACCAGGGCCAGCTGGAGCCAAAGGAGAACCAGGACTG
TCTGGGTTAGGATTACATGGAAAAGATGGGTTACCTGGTCCCGCTGGCCCTCCCGGGCCA
CCGGGGTTAACAATTTCGTCAGATAATGGAGTCATCGCCGAACCAGGACAGAAAGGAGAA
CCAGGGCCAGCTGGAGCCAAAGGAGAACCAGGACTGTCTGGGTTGGGATTACATGGAAAA
GATGGGTTACCTGGTCCCGCTGGCCCTCCTGGACCACCGGGGTTAACAATTTCGTCAGAG
AATGGAGTCATCGCCGAACCAGGACAGAAAGGCGAACAAGGAGAAAAGGGCATGACTGGA
ATGGGCATAACTGGTCCCAAGGGAGATAAAGGAGAAATCGGAATTGGTCTCACTGGCGCT
ACAGGACAAGATGGACAATCAATCAAGGGTGAACCGGGAATGCCCGGACCACCGGGTCCG
CCAGGACCATCGGGTGATTCTACGACCATAGAAAGTGGAGGATTGGTCAATGATGAAAGA
AATGGAAAAGATGGTCTTGCTGGTGAACGAGGTCCCGTTGGACCAACGGGTGAGAAGGGT
GACAAAGGAATGAATGGCCTTGCCGGCGTACAAGGACCTACTGGTCCACAAGGAAGAGCT
GGTATTAAAGGTTCCACTGGCAGCCGCGGTCGGCCCGGCGTACAAGGACGTCAAGGAATA
AGAGGCTTGCCAGGGCGATCTGTTACTGGACAAAAAGGGAAATCAGGGGCTAGTGGGGAG
AAGGGTGAAACTGGCGCAGGGTTGCCTGGACCACCAGGTCCCCCAGGACCTCCTGGACAA
ACAGGCAGCCGAGGGGCTAGTGGGGAGAAGGGTGAAACTGGCGCAGGGCTGCCGGGACCA
CCAGGTCCCCCAGGACCTCCTGGACAAACAGGCAGCCGAGGCAGTGACGGAGGAGCTTGC
TGCCAAGAAGAAAAGGTTGCTTTCATGGCTGGACTTTCGCATAATATGCAAGGCAATTAC
GACCGTATTGCATTTGATAAAGTGTTAACCAACGAAGGTGGAGCTTATAACTCAGTCACT
GGTTGTTTCATTGCCCCTGCTGCTGGCATATACGTGTTTCACATGCACATATTGCGATGT
CAAAACGGAGGTCCATTATTTGCCCATCTCATGAAGAATAGTGAAATGATCAGCTCCGGA
ACGAACCAAGATATCAAATATGAAACAACGAGCACATCAGCTGTCCTTGTTTTGAAGAAA
TGCGACGTTGTGTGGGTGCGATTGCGGCAGGGCGTTGCTTATGGACACAGTCCTTCACAC
TATACATCCTTTTCGGGATTTTCACTGTCGCTACAAGAAGCTATTGACACCAGCGCGTAT
GCAAGAGCGGATACTACGCTTGCAAGTTTTCCTTTAAGGCGGAAATCACCGCGTGCCGCC
TTGACAATGCTGTTTGTTAAACGTTGTCTTTATTCTGCGCAGGGCGCAGATCAACCGGTT
CAACACCTTCGACGTGAACAATAA
| Pfam |
Collagen (IPR008160) - T[146-191] 2.2E-6 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[559-696] 1.9E-35 |
| SMART |
C1q_dom (IPR001073) - T[559-692] 4.1E-12 |
| ProSiteProfiles |
C1q_dom (IPR001073) - T[561-695] 25.227 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[564-689] 5.8E-26 |
| Pfam |
C1q_dom (IPR001073) - T[567-687] 7.6E-23 |
| PRINTS |
C1q_dom (IPR001073) - T[576-602] 7.8E-10 - T[603-622] 7.8E-10 - T[648-669] 7.8E-10 - T[680-690] 7.8E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COOA1_HUMAN | 38.745 % | 140 | 4.38E-34 |
| OTOL1_HUMAN | 34.856 % | 123 | 7.14E-30 |
| CO4A1_HUMAN | 41.944 % | 126 | 1.45E-29 |
