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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...'
  2. Transcript 'Haaura.CG.MTP2014.S4...'
  3. Transcript 'Moocul.CG.ELv1_2.S93...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S93555.g07580.01.t

Possible name(s)

POLR2I; POLR3K; ZNRD1

Location

S93555 [65,156 / 66,531]

Sequences

Amino acid sequence

Length: 129

>Moocul.CG.ELv1_2.S93555.g07580.01.p
MDTSLNQATSGPGFVGIKFCQECNNMLYPKEDKQNRVLLYSCRNCDFQMESDNPCIYVNK
IVHEIDELTQIIADVAQDPTLPRTKDHSCPRCQYKEAVFFQSQSTKQEEGMRLYFVCSNK
ECGHRWTQL

Nucleotide sequence

Length: 807

>Moocul.CG.ELv1_2.S93555.g07580.01.t
GGGATATTGAGTCGACAAGTATTTGCGCAAATATGACTAGTTTGTCTTTTATCCATCGCC
GTCTTGGGCAGAGTTTAGGGTGATAAGAAAAAAAAAACTACTGTCTGATTGCGCTTTTCA
CAACAAGTCTATTCTGTATTGAATCAGAAACATGGATACATCTCTGAACCAAGCTACAAG
TGGACCAGGGTTTGTTGGAATCAAGTTTTGTCAAGAATGCAACAACATGTTGTATCCAAA
GGAGGATAAACAGAATCGTGTTTTACTCTATTCTTGTAGAAATTGCGATTTTCAAATGGA
ATCGGACAATCCATGTATCTATGTAAATAAAATTGTCCACGAAATTGATGAATTAACGCA
AATTATAGCAGATGTCGCGCAAGATCCCACATTACCAAGAACTAAAGATCATTCATGCCC
AAGATGTCAGTACAAAGAAGCAGTGTTTTTCCAGTCACAATCCACAAAGCAAGAAGAAGG
AATGAGGCTATACTTTGTCTGCAGTAATAAAGAATGTGGACATAGATGGACACAATTGTG
ATTGGTGAAGGAAGCAACCATTGTCAAAAATGAGTCAATGTGGTTATGCCGGCTTCGTCT
TCATGCCATGAACACAACCAAAAATGTGAATTTCAACTTGTATATTTTGTATTGTTTTCG
AAGTCCGAACGATATCATTTCTGTTTATTCTTTCATGGTTCTAAACACATATTCAAAAGT
CTTATTCACCTTACTTTTAATAAATGCTCGACTACATCTAATTTAGATTTTAATAAATGC
TTAATAACTACATCGTTATCTTTCCTT

InterProScan

PIRSF
Rpa12/Rpb9/Rpc10/TFS (IPR012164) - T[17-129] 4.3E-19
Pfam
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[17-53] 1.2E-12
SMART
DNA-dir_RNA_pol_M/15kDasu (IPR001529) - T[18-71] 1.3E-21
ProSitePatterns
DNA-dir_RNA_pol-M_15_CS (IPR019761) - T[19-45] .
CDD
Zn_ribbon_RPB9_C (IPR034012) - T[77-127] 1.23187E-25
ProSiteProfiles
Znf_TFIIS (IPR001222) - T[85-127] 12.213
Pfam
Znf_TFIIS (IPR001222) - T[87-127] 2.3E-11
SMART
Znf_TFIIS (IPR001222) - T[87-128] 6.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPB9_HUMAN 73.554 % 204 1.16E-69