- Transcript 'KH2012:KH.S2577.1.v1...' >
- Clone 'cima878296' >
- Transcript 'KH2012:KH.C7.522.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S89...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S89473.g07062.01.t
Possible name(s)
POC1A; POC1B; RACK1
Gene model
Location
S89473 [43,813 / 46,690]
Amino acid sequence
Length: 321
>Moocul.CG.ELv1_2.S89473.g07062.01.p
MVEQMTLRGTLKGHNGWVTQIATTPAYPDMILSASRDNSIILWKLTKEDSRYGIPQRRLT
GHNHFVTDVVISSDGQFALSGSWDGELRLWDLSLGVSTRRFTGHTKDVMSVAFSSDNRQI
VSASRDRTIKLWNTLGVCKYTIMDEGHNDWVSCVRFSPNAGNPVIVSCGWDKIVKVWNLT
NCKLKTNHFGHTAFINIVTVSPDGSLCASGGKDGQAMLWDLNDGRHLYTLNGEAEIHAMA
FSPNRYWLAAACGPSVKIWDLEGKIIVDELLPEVINIANSKAAPPECISLAWSADGQTLF
AGYADSLIRVWQVSVPAQHLA
Nucleotide sequence
Length: 1,158
>Moocul.CG.ELv1_2.S89473.g07062.01.t
CACGGGGTCAAATAAAATTGGACGTAGTGTGTCGCTAGAGCGTGTAATGTCTTTTTCAGG
TTGGTTTTCCAGTGGCCTGTGTTGTAAAATGAAAATCTAGTCTTTTAATCTTCATTTATC
TGGAACGTAAAAACCAATCCAAGCAATCATGGTGGAGCAAATGACTTTAAGAGGAACCCT
GAAGGGCCACAATGGGTGGGTTACACAAATTGCAACGACACCAGCTTATCCTGATATGAT
TTTGTCAGCCTCAAGAGATAATAGTATCATCTTGTGGAAGTTGACAAAAGAAGATTCGAG
GTATGGAATCCCGCAAAGACGACTTACAGGGCACAATCATTTCGTAACTGATGTTGTGAT
CTCGTCTGATGGACAGTTCGCCTTATCCGGATCATGGGACGGTGAACTACGTCTTTGGGA
TTTATCTCTCGGTGTAAGCACCCGACGATTCACTGGTCACACCAAAGATGTCATGTCTGT
TGCCTTCTCCTCTGACAACCGTCAAATCGTGTCAGCATCAAGAGATCGAACAATCAAATT
GTGGAATACTTTGGGAGTATGCAAATACACAATCATGGATGAAGGGCATAATGATTGGGT
CTCATGCGTGCGTTTTTCACCAAATGCTGGCAACCCTGTTATTGTATCATGCGGATGGGA
CAAAATCGTCAAGGTTTGGAATTTAACTAACTGCAAGCTGAAGACGAATCATTTTGGCCA
CACTGCTTTCATTAACATCGTTACTGTTTCTCCTGATGGTTCACTTTGTGCCTCCGGTGG
AAAAGATGGCCAAGCTATGCTTTGGGATCTGAATGATGGTCGACATCTTTACACCTTGAA
CGGCGAAGCTGAAATCCATGCAATGGCTTTCTCACCAAACCGATACTGGCTTGCTGCTGC
ATGCGGTCCATCTGTCAAGATTTGGGATTTGGAAGGCAAGATAATCGTGGATGAATTGCT
ACCAGAAGTTATTAACATTGCTAATAGCAAAGCTGCTCCTCCAGAGTGCATCTCATTGGC
ATGGTCTGCCGATGGCCAGACATTGTTTGCTGGATACGCCGACAGTTTGATCCGAGTGTG
GCAAGTCTCTGTACCTGCCCAACACCTCGCATAACTTTATGACTTGGATGTCGTCGAAAT
AAAAATGATAAAAATTGG
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[4-313] 7.73E-74 |
| SMART |
WD40_repeat (IPR001680) - T[4-44] 1.7E-6 - T[52-91] 4.1E-7 - T[94-133] 4.4E-10 - T[135-178] 2.9E-8 - T[180-220] 1.7E-6 - T[223-260] 0.05 - T[273-312] 1.2 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[8-318] 1.0E-132 |
| Pfam |
WD40_repeat (IPR001680) - T[8-44] 0.0023 - T[55-91] 1.2E-8 - T[98-133] 1.3E-8 - T[145-178] 8.9E-6 - T[188-220] 8.3E-5 - T[225-260] 1.6E-4 - T[288-311] 0.015 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[11-321] 50.621 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[11-53] 11.511 - T[59-100] 14.519 - T[101-133] 15.889 - T[144-187] 11.845 - T[188-229] 13.75 - T[289-314] 9.205 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[78-92] 5.4E-8 - T[120-134] 5.4E-8 - T[207-221] 5.4E-8 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[78-92] . - T[120-134] . - T[165-179] . - T[207-221] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1A_HUMAN | 29.618 % | 127 | 1.3E-33 |
| POC1B_HUMAN | 28.571 % | 127 | 4.62E-33 |
| RACK1_HUMAN | 79.365 % | 540 | 0 |