- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.S404.1.v2....' >
- Transcript 'KH2012:KH.C3.297.v1....' >
- Molecular Tool 'cicl06b19-MO (Hamada's MO)' >
- Transcript 'Moocul.CG.ELv1_2.S88...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S88676.g06937.01.t
Possible name(s)
AC012531.3; HOXC4; MNX1
Gene model
Location
S88676 [44,487 / 46,470]
Amino acid sequence
Length: 419
>Moocul.CG.ELv1_2.S88676.g06937.01.p
MLSAQSHNRAMHRSINEYLTRSADLSPREDKVCGSYDSSEDDVQKQMAKRSVSRSSWSSA
SSLTSPSRYQHDHVQSHDGSTDSPSDAQPEQGKISPRGSQFRIESLLSISPKNSGIKNGT
NCRWYDLVKNNGKVKQNGGSRRQSQISEVSSKVSPTASPFIDVVNDDGSGGRGTLTDIYP
GIPKPNSSAFQTAEASCGMPPFAMYPNFPGVPFNQISFAAALAASHMERNAQNSAEGNRN
VTSDHGSKDEKDTSKSSSHPPMVYPSPFSNLIPSFGHHPFLGQYGFPQATPVASMPGYAA
GSHNFNLPHSASQHPQQTLAMELLRSGRMFRDITEIAGHVHPGLLSRARRPRTAFTSQQL
LELEKQFKQNKYLSRPKRFEVATNLCLTETQVKIWFQNRRMKWKRSQKEACGKFEEETE
Nucleotide sequence
Length: 1,501
>Moocul.CG.ELv1_2.S88676.g06937.01.t
TGTTTTACAGGCTTGATTAACAGAGAAGTTGCATTATAACTGAATTTTGTATTAAGAATT
TTGTATAAACGTTTAACGCATAAACATGCTCAGCGCCCAAAGTCACAATAGAGCAATGCA
TAGAAGCATCAATGAATATCTAACAAGATCAGCAGATCTGTCTCCTCGAGAAGACAAAGT
ATGTGGATCCTACGATTCATCTGAAGATGATGTACAAAAGCAGATGGCCAAGCGATCAGT
TTCAAGGTCTTCGTGGTCATCAGCATCCTCCCTTACTTCGCCGTCTCGATATCAACACGA
CCACGTTCAAAGTCACGATGGCAGCACCGACTCGCCTTCAGATGCACAGCCAGAACAAGG
AAAAATATCGCCAAGAGGGTCGCAATTCAGAATCGAATCTTTGCTGTCGATTTCACCAAA
AAATTCCGGAATCAAAAATGGTACGAATTGTCGTTGGTACGATTTGGTGAAGAACAATGG
AAAAGTCAAACAAAATGGCGGTTCCAGACGCCAATCACAAATCAGCGAAGTTTCCTCAAA
GGTTTCGCCAACGGCAAGTCCTTTTATAGATGTTGTAAACGACGATGGCAGCGGAGGCCG
TGGAACTTTGACGGATATCTATCCAGGAATCCCCAAACCCAACAGTTCGGCTTTCCAAAC
CGCCGAAGCTTCATGTGGAATGCCCCCATTTGCAATGTACCCAAACTTTCCCGGAGTTCC
ATTTAATCAGATATCGTTTGCCGCGGCATTGGCAGCATCACACATGGAAAGAAATGCTCA
GAATTCAGCAGAAGGCAATCGAAATGTAACTAGTGACCATGGAAGTAAAGATGAGAAAGA
CACTTCCAAGTCAAGCAGTCACCCACCAATGGTTTATCCGAGCCCCTTTTCAAACCTTAT
CCCGTCCTTTGGACATCACCCATTTCTTGGCCAATATGGGTTCCCACAAGCGACACCTGT
TGCATCAATGCCTGGTTATGCGGCAGGATCTCATAACTTCAACTTACCTCATTCGGCCTC
CCAACATCCTCAGCAAACACTTGCCATGGAACTTCTCAGGAGTGGTCGCATGTTTCGAGA
CATAACTGAAATTGCAGGACATGTACATCCAGGTCTTCTCAGTCGTGCCAGACGACCAAG
AACGGCGTTCACCTCCCAACAGCTACTTGAACTTGAAAAACAATTCAAGCAGAACAAATA
TCTTTCCAGACCAAAACGATTTGAGGTTGCAACAAATTTGTGTCTTACAGAAACTCAGGT
GAAAATCTGGTTTCAAAACAGAAGAATGAAGTGGAAGAGAAGCCAGAAGGAAGCATGTGG
AAAATTCGAAGAAGAAACTGAATGATAACTGTGCATTATATTTATTTCGTTATTTTATTG
TTTTTTTTTTATGTTATAGGCCTAAAAGCTGTGCACTGTGCAGTATATTATTGTTCGCTA
TGTAATACAATAGTATTATTAACCAAAAAATGAAATAAGATGTTTTTCCATTAATATTTA
A
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[338-408] 2.27E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[346-406] 22.058 |
| SMART |
Homeobox_dom (IPR001356) - T[348-410] 6.7E-25 |
| Pfam |
Homeobox_dom (IPR001356) - T[349-405] 4.9E-22 |
| CDD |
Homeobox_dom (IPR001356) - T[349-407] 6.13096E-24 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[370-381] 6.2E-8 - T[385-395] 6.2E-8 - T[395-404] 6.2E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[381-404] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA4_HUMAN | 65 % | 92 | 9.29E-21 |
| HXC4_HUMAN | 61.667 % | 91.7 | 5.26E-21 |
| MNX1_HUMAN | 69.88 % | 124 | 9.66E-32 |