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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S20...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Moocul.CG.ELv1_2.S71...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S71737.g04853.01.t

Possible name(s)

NAA38; SNRPB; SNRPN

Gene model

Moocul.CG.ELv1_2.S71737.g04853

Location

S71737 [3,594 / 4,605]

Sequences

Amino acid sequence

Length: 87

>Moocul.CG.ELv1_2.S71737.g04853.01.p
MTSTENESEGRQQLRSWLGRNMRIKMSDGRTLVGQFLCTDKQRNVILGSAQEYFQYNEAN
CDEDPRILGLAMIPGKHILSMQVDLDV

Nucleotide sequence

Length: 693

>Moocul.CG.ELv1_2.S71737.g04853.01.t
GTGATGTATTCGATCAAACGCAGCATTTATATTTTAGATGTACCCGCTAAACAACAGGCG
TACGTTAGAATTTTTTACATGTTAACGTTTACTGTTTATAGCGGTCGTCATCCTGCTGTC
CTATACACAGATACAGTATAAGCTGATAAGCAGTAAGTTTACATGTTCATATGCTGTATG
AGCAGATCATCTAAAAGAGCCAGACACTGAGAAAGCTATCCGCTCGACATGACGTCTACA
GAAAATGAATCTGAAGGAAGACAGCAACTGCGATCTTGGTTGGGACGAAACATGAGAATT
AAAATGTCTGATGGTCGAACATTGGTTGGACAATTTCTTTGTACAGATAAACAAAGAAAC
GTGATTCTGGGCTCTGCTCAGGAATATTTTCAATATAACGAAGCTAATTGCGACGAAGAT
CCACGGATACTCGGCTTGGCGATGATCCCGGGAAAACATATCTTGTCGATGCAAGTGGAT
TTGGATGTTTGAAGATCATCTCTTTTGTGTTTCAATGAAAATCGTTCAAGAAAAAAGTGA
AGAAAACACTTTAAATCACGAAAGAAACAAATTATTACGACATGATGAATGATTGGTTTA
CTTAATGATTGTTTCATGTTAAATACTTTCCACCCTTTTGTAATTTTTAATTAATCAAGA
TTAATTGTCAGAAATAATGCAAGATTGCATTAT

InterProScan

PANTHER
LSMD1 (IPR034110) - T[6-84] 1.2E-37
CDD
LSMD1 (IPR034110) - T[11-84] 1.77729E-35
SMART
LSM_dom_euk/arc (IPR001163) - T[12-83] 2.9E-8
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[12-83] 4.28E-16
Pfam
LSM_dom_euk/arc (IPR001163) - T[13-82] 2.4E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LSMD1_HUMAN 58.108 % 97.4 6.32E-28