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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'
  3. Transcript 'Moocul.CG.ELv1_2.S62...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S62064.g03941.01.t

Possible name(s)

TUBB2A; TUBB2B; TUBB4B

Location

S62064 [60,581 / 62,240]

Sequences

Amino acid sequence

Length: 449

>Moocul.CG.ELv1_2.S62064.g03941.01.p
MREIVHLQAGQCGNQIGAKFWEVISDEHGVDPTGSFAGDDESMQLERINVYYNEANCGKY
VPRAVLVDLEPGTMDAVRSGPFGQIFKPDNFVFGQSGAGNNWAKGHYTEGAELIESVLDV
VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTYSVVPSPKVSDTV
VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC
LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVAELTQQMFDAKNM
MAACDPRHGRYLTAATIFRGRMSMKDVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR
GMKMSGTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYQDATADEEDEEYDDDDGLEGNYD

Nucleotide sequence

Length: 1,401

>Moocul.CG.ELv1_2.S62064.g03941.01.t
TTCTTTCACAGTTTATATTATTTTAATTTATTCTCTTAACCGTCCTTCGCAATGAGAGAA
ATCGTCCACTTGCAAGCTGGTCAATGCGGAAACCAAATTGGTGCCAAGTTTTGGGAGGTC
ATCAGTGACGAACATGGCGTCGATCCAACGGGATCGTTTGCTGGCGACGATGAATCAATG
CAATTGGAAAGGATCAATGTTTATTACAATGAGGCAAATTGTGGGAAATACGTACCGCGT
GCCGTATTGGTCGACCTTGAACCTGGTACCATGGACGCCGTTCGGTCTGGACCATTCGGG
CAAATATTCAAACCAGATAATTTTGTGTTTGGTCAAAGTGGTGCCGGCAACAATTGGGCC
AAAGGTCATTACACAGAAGGCGCAGAATTGATCGAAAGTGTCCTTGATGTGGTCAGAAAG
GAGGCGGAAAGTTGTGATTGTCTTCAAGGGTTCCAACTCACCCATTCACTCGGTGGTGGA
ACGGGATCAGGTATGGGAACCCTCCTCATCAGCAAGGTCAGAGAGGAATACCCAGACAGA
ATAATGAACACATACAGTGTTGTCCCTTCACCCAAAGTGTCAGACACTGTGGTTGAGCCG
TACAACGCCACCTTATCCGTCCACCAACTTGTCGAAAACACAGATGAGACTTTCTGCATC
GACAACGAAGCTCTTTATGATATTTGTTTCCGTACACTTAAACTGACCACACCAACCTAT
GGCGATTTGAACCATCTTGTGTCCGCTACTATGAGTGGAGTCACCACTTGCCTTCGATTC
CCAGGACAACTCAACGCTGATCTTCGAAAGCTTGCCGTCAACATGGTTCCCTTCCCACGT
CTCCACTTCTTCATGCCAGGTTTTGCGCCTCTCACCAGCAGAGGCAGTCAACAATACAGA
GCTCTCTCTGTGGCCGAACTCACACAACAGATGTTCGATGCCAAGAACATGATGGCGGCC
TGCGATCCACGACATGGACGGTACCTCACCGCTGCCACAATCTTCAGAGGACGTATGTCA
ATGAAGGACGTTGATGAGCAAATGTTGAACATCCAGAACAAGAACAGCTCATACTTCGTG
GAATGGATCCCCAACAACGTGAAGACGGCTGTCTGCGACATCCCACCAAGAGGAATGAAG
ATGTCTGGTACCTTCATCGGAAACAGCACCGCCATCCAAGAATTATTCAAGCGTATCTCT
GAGCAATTCACTGCCATGTTCCGACGAAAGGCTTTCTTGCATTGGTACACTGGCGAGGGA
ATGGACGAGATGGAATTCACTGAAGCCGAGAGCAATATGAATGATTTGGTCAGCGAATAC
CAACAATACCAGGACGCAACTGCTGATGAGGAGGATGAAGAATATGACGATGATGATGGC
TTGGAGGGTAATTACGATTAA

InterProScan

ProSitePatterns
Beta-tubulin_BS (IPR013838) - T[1-4] .
Gene3D
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-264] 7.4E-125
SUPERFAMILY
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-244] 1.7E-99
Pfam
Tubulin_FtsZ_GTPase (IPR003008) - T[3-212] 5.8E-69
PRINTS
Tubulin (IPR000217) - T[10-30] 1.4E-103 - T[52-71] 1.4E-103 - T[94-105] 1.4E-103 - T[107-131] 1.4E-103 - T[133-151] 1.4E-103 - T[152-173] 1.4E-103 - T[177-190] 1.4E-103 - T[191-211] 1.4E-103 - T[371-399] 1.4E-103
PANTHER
Beta_tubulin (IPR002453) - T[12-443] 0.0
PANTHER
Tubulin (IPR000217) - T[12-443] 0.0
PRINTS
Beta_tubulin (IPR002453) - T[42-59] 7.4E-120 - T[89-100] 7.4E-120 - T[109-127] 7.4E-120 - T[153-165] 7.4E-120 - T[213-225] 7.4E-120 - T[231-240] 7.4E-120 - T[246-259] 7.4E-120 - T[266-282] 7.4E-120 - T[312-330] 7.4E-120 - T[330-344] 7.4E-120 - T[348-371] 7.4E-120 - T[378-389] 7.4E-120 - T[413-431] 7.4E-120
SMART
Tubulin_FtsZ_GTPase (IPR003008) - T[48-245] 4.3E-69
ProSitePatterns
Tubulin_CS (IPR017975) - T[141-147] .
SUPERFAMILY
Tub_FtsZ_C (IPR008280) - T[245-430] 1.25E-84
SMART
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[247-384] 1.0E-51
Pfam
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[262-382] 1.6E-43
Gene3D
Tubulin/FtsZ_C_sf (IPR037103) - T[265-374] 6.7E-57
Gene3D
Tubulin_C (IPR023123) - T[375-444] 1.0E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBB4B_HUMAN 93.925 % 830 0
TBB2B_HUMAN 93.039 % 830 0
TBB2A_HUMAN 92.807 % 827 0