- Transcript 'Moocul.CG.ELv1_2.S82...' >
- Clone 'citb058c22' >
- Transcript 'Moocul.CG.ELv1_2.S61...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S61030.g03847.01.t
Possible name(s)
LRP1; RXFP2; SORL1
Gene model
Location
S61030 [11,058 / 15,639]
Amino acid sequence
Length: 926
>Moocul.CG.ELv1_2.S61030.g03847.01.p
MHPNKLILFILITYLCELNSFCESNSSNKGTTQNPIQNFFTCANGRKLTADKFCDGFDDC
ADGSDENDVITTKPPTHYNYGNVGCNNIRTLINKTCRLNSSYVCDNIISCKNVTKCGAKC
NTHYECLNSKTCITRSTICDQSSCSGCPEDHEWPNGVGFKCRKQGRVCVLPQQLTWDDIT
DCDGGVDRCFDVRNETKVINQDLRFDIFANFNKTRCFKCFDGKTIIQRSSVCDGIIDCPD
LSDECVCQRNISSVCNRVVHLLDRKQSCDLGQFQCSEGTCISRTSICDGVSNCKNSEDEI
CGWYYKTCKKQMGIPCNNIEECALYADYGTIRWSDEGFPDDECVANCSLNPTHNYTCGNS
WFLGAGPGLYWFSSCVEKIAYPPTAIPAHDISQICDGIIDCDNKIDELYCDGTRFSCNAG
EYVSIALNLVCDGVKDCDFGEDETFERCGDKRIFCDALGGNAVSIDKSSVCDMYIDCDDG
RDEANCSHLNDRFYCENGTPMFVSITKIKDGKGDCNDYTDECPSKGQYKTDSIFSSNREL
ISNVALRILIWIMALLSLCGNMVVFIFEIKIIHNGSLSAALLANHILVANLSLADFLMGI
YLLSLAIKSQQMSGAYCAQDLIWRSSSTCVGLGVISTLASEASIFFLMLLTSSRVYAVYK
VWVCSILPHLSIANPTKMVVAAMVFLAWLIAFILALVPISSQLQTIFVEKAVYPNNPFDI
TRGSTIQESRKSLMKLLTFSGTNFTELEDISWDEIENIGKTFSGHPDYFEGVQYFGFYGQ
SVCIQKFFATTSNPAWRYSFFLNLLNCLLFIFVPVAYVAVYYRATGGIIQQSQSVQVKRD
EKMIRIQRKIIRLILTDFCCWVPITIMAFVKLATGQLSDEAYAFAAIILLPINSALNPML
YSNLMDFIYENVHSRCKAHSNNISTT
Nucleotide sequence
Length: 2,791
>Moocul.CG.ELv1_2.S61030.g03847.01.t
GTACGGGTGAATTATGCACCCCAATAAGTTAATTTTGTTCATTCTAATAACTTATCTGTG
TGAACTGAACTCGTTTTGTGAAAGCAACTCTTCAAACAAAGGTACTACACAGAATCCAAT
TCAGAATTTTTTCACATGTGCAAACGGTCGAAAGCTTACCGCCGATAAATTTTGCGATGG
ATTTGACGATTGCGCTGATGGTAGTGACGAAAATGACGTAATCACAACGAAACCACCAAC
GCATTACAATTACGGAAATGTTGGTTGCAATAACATTCGAACGTTAATCAATAAGACGTG
CAGACTTAACAGTTCTTATGTGTGTGATAATATCATTAGCTGCAAAAACGTGACAAAGTG
TGGTGCGAAATGCAATACACATTACGAATGCTTGAATTCTAAAACATGTATAACGCGAAG
TACAATTTGTGATCAATCAAGTTGTTCCGGTTGTCCAGAAGATCATGAATGGCCGAATGG
TGTTGGGTTCAAATGTAGGAAGCAGGGACGAGTGTGTGTTCTTCCACAGCAGTTAACTTG
GGATGATATAACTGATTGTGATGGAGGAGTCGATCGTTGTTTTGACGTTCGCAACGAAAC
CAAAGTAATTAACCAGGATTTGCGTTTTGACATTTTCGCGAATTTCAACAAAACCCGATG
TTTCAAATGTTTCGACGGGAAAACCATAATTCAACGTTCCAGTGTTTGTGATGGAATAAT
TGATTGTCCAGATTTGTCGGATGAGTGCGTCTGTCAACGCAATATCAGCTCCGTATGCAA
TCGGGTTGTCCATCTGCTTGACCGAAAACAATCTTGTGACTTGGGACAATTTCAATGTAG
TGAGGGAACATGCATCAGCCGTACTTCGATATGCGACGGAGTCTCCAACTGCAAGAACAG
CGAAGATGAAATATGCGGATGGTACTACAAAACCTGTAAAAAACAAATGGGCATACCTTG
CAATAACATCGAGGAATGTGCGCTGTACGCTGATTATGGAACTATAAGGTGGAGTGATGA
AGGTTTCCCGGATGATGAATGCGTTGCGAACTGCAGTTTAAATCCAACCCATAACTACAC
ATGTGGAAACTCTTGGTTCTTGGGAGCGGGGCCAGGTTTATATTGGTTTTCTTCTTGCGT
TGAAAAGATCGCCTACCCCCCCACTGCAATACCCGCGCACGATATTTCACAGATATGTGA
TGGCATAATTGATTGCGATAATAAGATCGATGAATTATATTGCGACGGTACGAGGTTCTC
CTGTAATGCTGGAGAATATGTCAGTATAGCATTGAATTTGGTTTGCGATGGAGTTAAAGA
TTGTGACTTTGGCGAAGATGAAACGTTTGAAAGATGTGGAGATAAAAGGATTTTCTGCGA
TGCTTTGGGAGGAAATGCGGTGAGCATCGACAAAAGCAGTGTTTGTGATATGTACATTGA
CTGTGATGATGGCAGAGACGAAGCAAACTGCTCCCATCTCAATGATCGGTTTTACTGTGA
GAATGGAACACCGATGTTCGTATCCATTACAAAAATTAAAGACGGAAAGGGCGATTGCAA
TGATTATACCGACGAATGTCCAAGCAAAGGACAGTACAAAACAGACAGTATTTTTTCGTC
TAATAGAGAGCTAATCTCAAATGTGGCGCTACGAATATTAATCTGGATAATGGCACTACT
TTCCTTGTGTGGAAACATGGTAGTCTTTATATTCGAAATCAAAATAATCCACAACGGTTC
ACTTTCTGCAGCACTGTTAGCTAATCATATATTGGTTGCTAATCTCTCATTAGCAGACTT
TTTAATGGGAATATATCTGCTAAGTTTGGCAATAAAGTCTCAGCAAATGTCGGGAGCGTA
TTGTGCACAAGATTTAATCTGGCGATCAAGTTCAACATGTGTTGGCTTGGGCGTCATTTC
AACACTTGCTTCTGAAGCTTCTATCTTCTTCTTGATGTTGTTAACTTCGTCCCGGGTGTA
TGCTGTATATAAGGTCTGGGTGTGTTCCATATTGCCACATTTATCTATTGCAAATCCTAC
GAAGATGGTGGTTGCAGCAATGGTATTTCTCGCATGGTTAATTGCATTTATTTTGGCTTT
GGTTCCAATCAGTTCACAACTGCAAACTATTTTTGTGGAAAAAGCTGTTTATCCCAACAA
TCCATTTGACATAACGAGAGGAAGCACAATTCAAGAGTCAAGAAAGTCGCTGATGAAACT
TCTCACGTTTTCAGGAACAAACTTTACAGAGTTAGAAGACATTAGCTGGGACGAGATTGA
AAATATTGGCAAAACATTTTCTGGCCATCCTGATTACTTTGAAGGCGTTCAGTACTTTGG
ATTTTACGGTCAAAGTGTTTGCATACAAAAGTTCTTTGCAACGACTTCCAATCCTGCCTG
GAGATATTCTTTCTTCCTCAATCTTTTGAACTGCTTGCTTTTCATCTTTGTGCCCGTTGC
ATATGTCGCTGTGTACTATCGAGCAACTGGTGGAATAATTCAACAATCACAATCCGTACA
AGTGAAACGAGACGAGAAAATGATTAGAATTCAACGTAAAATTATACGCCTAATACTGAC
TGACTTTTGCTGTTGGGTGCCGATAACGATTATGGCTTTTGTGAAACTTGCAACGGGACA
ATTATCGGATGAAGCTTATGCGTTTGCAGCTATCATTCTTCTTCCAATAAACAGCGCACT
CAACCCAATGCTATACTCGAATCTCATGGATTTTATTTATGAAAATGTCCACAGCAGATG
CAAAGCTCACTCGAACAATATTTCAACTACG
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[21-70] 8.637 - T[267-302] 11.788 - T[346-411] 8.575 - T[409-449] 9.312 - T[447-487] 9.062 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[33-71] 1.4E-4 - T[212-249] 0.032 - T[267-303] 6.7E-6 - T[409-450] 0.0064 - T[454-488] 0.089 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[37-69] 6.68E-8 - T[213-247] 3.4E-5 - T[266-301] 7.59E-8 - T[409-443] 6.87E-6 - T[447-487] 9.03E-5 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[37-68] 2.91128E-6 - T[217-247] 0.00219989 - T[268-299] 3.18012E-6 - T[410-443] 0.00550349 - T[465-486] 0.00409392 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[54-140] 9.7E-81 - T[231-921] 9.7E-81 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[223-244] 1.5E-18 - T[278-299] 1.5E-18 - T[386-407] 1.5E-18 - T[422-443] 1.5E-18 - T[462-483] 1.5E-18 - T[500-521] 1.5E-18 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[267-299] 2.3E-5 - T[410-448] 9.3E-6 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[280-301] . |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[560-901] 21.836 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[583-700] 2.3E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SORL_HUMAN | 27.928 % | 84 | 3.06E-16 |