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TRANSCRIPT CARD

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  1. Clone 'cijv043e03'
  2. Clone 'cscl039i03'
  3. Region 'REG00000443'
  4. Clone 'csef005l15'
  5. Transcript 'Moocul.CG.ELv1_2.S60...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S60049.g03777.01.t

Possible name(s)

SIX1; SIX2; SIX4

Location

S60049 [62,010 / 64,392]

Sequences

Amino acid sequence

Length: 435

>Moocul.CG.ELv1_2.S60049.g03777.01.p
MAATLAVNSYPAVLPPVVQHPAAAAVAAGFFSSQSVTGQSNAFTPCGMSTHPGMMSSAVP
HGPPPPGLSFGFTQEQVACVCEVLQQGGNIERLARFLWSLPACEHLHKNESVLKAKAVVA
FHRGNFRDLYKILESHNFSQQNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPL
PRTIWDGEETSYCFKEKSRAILRDWYTHNPYPSPREKRELAEGTGLTVTQVSNWFKNRRQ
RDRAAEAKEKDGSETMSQCGMPPGMPGQVMGTPPLMDGSASSGHSNTSHDMMEQKPGMES
QMHPHHHQHNPHVQNMHPDMMQQHHTPPQHQGQSPTSMAPHNMLIGSGSIHNTPPISHIH
PGSMQEHYTMTGSNHMRDHTMSLPHHGLGGEYGQSMGHLAQQQHHPSVSVHGSPVTMHDN
LMHPSLVNSMVDMGS

Nucleotide sequence

Length: 1,841

>Moocul.CG.ELv1_2.S60049.g03777.01.t
CGCATATTTAACTCAGTTTATTTTGTTTACAGCAAAATTTTAAATTATCTAAAGAACATT
TGAACGTAAATAACTGCTTGGATCCATTCAACTGAAGACACGGCAGAAATATCAGGAAAT
TTGGCACATTCAACTCATTTTTACAAGCTTAAAAACAGAGGCTCAGCGCCCGACATTTTC
ACGGGCTTTTTCAAATGGCAGCGACGCTCGCTGTCAATTCCTACCCGGCCGTCCTTCCAC
CGGTCGTACAACATCCGGCTGCAGCGGCAGTAGCAGCAGGCTTTTTCTCATCCCAAAGCG
TCACCGGGCAATCAAACGCCTTTACACCTTGCGGCATGTCAACCCATCCAGGAATGATGA
GTTCCGCCGTCCCTCATGGACCACCACCTCCCGGCCTCTCCTTCGGATTCACTCAGGAGC
AAGTTGCGTGCGTCTGTGAAGTTTTGCAACAAGGAGGAAACATTGAAAGACTGGCGAGAT
TCCTTTGGTCGCTTCCAGCATGTGAGCATCTTCACAAGAATGAAAGTGTGTTGAAAGCAA
AAGCTGTTGTTGCTTTTCATCGAGGAAACTTCCGAGATTTGTACAAGATTTTGGAAAGTC
ACAATTTTTCACAACAAAACCACCCAAAGTTGCAACAATTATGGCTCAAAGCTCATTACA
TCGAGGCCGAGAAGTTAAGAGGTCGCCCACTTGGTGCTGTTGGAAAATATCGCGTTAGGA
GGAAGTTTCCTCTTCCACGAACCATCTGGGATGGAGAAGAAACAAGTTATTGCTTCAAGG
AGAAGTCGAGGGCGATCCTGCGAGATTGGTACACACACAACCCATACCCATCACCACGGG
AGAAGCGTGAACTGGCTGAAGGTACCGGTCTTACAGTGACTCAAGTCAGCAATTGGTTCA
AAAATCGTCGACAACGAGACAGGGCTGCAGAAGCAAAGGAAAAGGATGGCAGCGAAACGA
TGTCCCAATGTGGAATGCCCCCAGGGATGCCTGGTCAAGTAATGGGGACGCCCCCACTGA
TGGATGGCTCAGCATCGTCAGGTCACTCAAATACAAGCCATGACATGATGGAACAAAAAC
CGGGAATGGAGAGTCAAATGCACCCGCATCACCACCAGCACAATCCACATGTACAGAACA
TGCATCCCGACATGATGCAGCAACATCACACCCCACCCCAACATCAGGGACAATCACCCA
CATCCATGGCACCCCACAACATGCTGATCGGCAGCGGATCCATCCACAACACTCCTCCAA
TCTCGCATATTCATCCCGGGTCGATGCAGGAACATTACACAATGACCGGTAGCAATCATA
TGCGGGACCACACCATGTCATTACCCCACCATGGACTGGGAGGAGAGTATGGACAATCAA
TGGGACATTTGGCACAACAACAGCACCACCCATCGGTCAGTGTGCATGGTTCTCCCGTAA
CAATGCATGATAACCTGATGCACCCATCCCTGGTCAACTCCATGGTGGACATGGGCTCAT
AAAACACAAGCTTATACTGCTCTTAATTCCGCGTCAAATTATCGATTCCAGAGGTCTTTA
CTACATGCATTCCTACTCAAGTTGTATTGACAACAAACTCTTGATATTCGTTCCTGAAAT
GCACACAAACAAACACACATTCCAAAATGAGACCAAACACTTGCAAAACATGTAAACTGT
GAAGGCAAATTTTGATAATTGGTTGGTTAACGAGGGAGCAAATTCATGAGAATTATCGCC
TGATTTCATATTTTTTGTGTCTTTGTGATGTTATTTTGCAAATGCTGTTATATAATGATC
AAATTATTATTATTATTTTTTTCGTAAAAGCTGTATTTAAA

InterProScan

PANTHER
SIX1 (IPR031278) - T[69-333] 2.4E-130 - T[396-435] 2.4E-130
Pfam
SIX1_SD (IPR031701) - T[72-182] 3.5E-49
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[185-245] 1.2E-17
ProSiteProfiles
Homeobox_dom (IPR001356) - T[185-245] 14.803
SMART
Homeobox_dom (IPR001356) - T[188-249] 1.4E-15
CDD
Homeobox_dom (IPR001356) - T[192-243] 1.59259E-17
Pfam
Homeobox_dom (IPR001356) - T[193-243] 3.5E-13
ProSitePatterns
Homeobox_CS (IPR017970) - T[220-243] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SIX4_HUMAN 67.742 % 281 5.04E-87
SIX1_HUMAN 81.991 % 374 3.69E-129
SIX2_HUMAN 92.222 % 361 4.45E-124