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- Transcript 'Moocul.CG.ELv1_2.S59...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S59369.g03698.01.t
Possible name(s)
H2AFV; H2AFZ; HIST2H2AC
Gene model
Location
S59369 [10,359 / 25,033]
Amino acid sequence
Length: 579
>Moocul.CG.ELv1_2.S59369.g03698.01.p
MPNKKKKAPRNAFSFYLDDAMDELRREGHKIHKKSDAVPLNLPDEQKKTYQSMADKWKSE
KKCAPRMGRLDCTGMPVDHRVNFDVEIALKRQEQRCMIRANWATRYGISKESFYFISFQS
YFEFPNEEGYQPCEIACVKFSLRHGIENEWHAFIDPGPLRPGLGAEAKIFTEKTHQIPIY
GFEHARQDHYQLWCELIQFVEKVEKSGVSNRLVKVHYLEDLVTELYEKVNEKSAPSSAII
EDALGSSILDYENNTNFWMSDAFHEHYGYELTDKHIPVSDVQYGMVQPGEEAWKDHEAIR
HISSSIKNKNIAYQKSSTTGEMVETRMANTDIRYRNKEVLINPDGFDAVGIEGNDNDADG
EDSENENKFPLRRPKAEILKIIMLQMVQWMVKKNGNPNMQHLMKLSFKFVKIWARKSIAL
ILCRKRRLLIGRYAMTRITIKALCRSGDYICNAGGKAGKDSGKSKAKAISRSARAGLQFP
VGRIHRHLKSRSTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQL
AIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKAP
Nucleotide sequence
Length: 2,102
>Moocul.CG.ELv1_2.S59369.g03698.01.t
ATGCCCAACAAAAAGAAGAAAGCTCCTAGAAATGCCTTCAGCTTCTATCTGGATGATGCG
ATGGATGAGCTAAGAAGAGAAGGCCATAAAATACACAAAAAGAGCGATGCAGTTCCACTG
AATTTGCCTGATGAGCAAAAGAAAACGTACCAAAGCATGGCAGATAAATGGAAATCAGAG
AAAAAATGCGCTCCACGAATGGGAAGACTTGATTGTACAGGAATGCCTGTTGATCATCGA
GTTAATTTCGATGTTGAAATTGCTCTGAAACGACAAGAACAGCGATGTATGATTCGTGCC
AACTGGGCAACACGATATGGAATCAGCAAAGAATCGTTTTATTTTATTTCGTTTCAATCG
TATTTTGAGTTTCCCAATGAAGAGGGTTACCAGCCATGTGAAATCGCCTGCGTTAAGTTC
TCACTTCGGCATGGGATTGAAAATGAGTGGCATGCTTTCATTGATCCAGGCCCGCTGAGA
CCTGGTTTGGGAGCAGAGGCCAAAATATTCACTGAGAAAACTCATCAAATCCCAATCTAT
GGATTTGAACATGCAAGACAAGACCATTATCAATTGTGGTGTGAGCTCATTCAATTTGTT
GAAAAAGTTGAAAAAAGTGGAGTTTCCAACAGACTAGTGAAAGTCCACTACCTGGAGGAT
CTTGTGACCGAACTTTATGAAAAAGTTAATGAAAAATCTGCTCCTTCATCTGCTATCATT
GAAGATGCTCTTGGTTCTTCAATTCTTGATTACGAAAACAACACAAACTTTTGGATGAGT
GATGCATTCCATGAACATTATGGCTATGAGCTTACAGATAAGCATATTCCAGTATCCGAT
GTGCAATATGGCATGGTTCAACCAGGGGAAGAAGCTTGGAAGGATCATGAAGCTATTCGT
CACATTTCAAGTTCAATTAAAAATAAGAATATTGCTTATCAAAAATCGAGCACAACCGGA
GAGATGGTTGAAACAAGAATGGCAAATACTGACATCCGATACAGGAACAAAGAAGTTCTG
ATCAATCCAGATGGTTTTGATGCAGTTGGTATTGAGGGCAATGATAATGATGCTGATGGA
GAGGATTCGGAGAATGAGAATAAATTTCCGTTACGAAGGCCAAAAGCTGAAATTCTTAAA
ATCATTATGCTACAAATGGTACAATGGATGGTTAAGAAGAATGGCAATCCAAATATGCAA
CATCTGATGAAACTTAGTTTTAAATTTGTTAAAATTTGGGCGCGAAAATCCATCGCGCTT
ATTCTTTGTAGGAAAAGAAGGCTTCTGATTGGTCGATACGCTATGACGCGAATTACTATA
AAGGCTTTATGTCGGTCAGGTGACTACATTTGCAACGCTGGAGGAAAAGCAGGCAAAGAC
TCTGGAAAATCCAAGGCGAAGGCAATCTCAAGATCTGCAAGAGCAGGACTTCAGTTCCCT
GTCGGTCGTATCCACAGACATTTGAAGAGCCGATCAACATCTCATGGCCGAGTTGGAGCA
ACAGCGGCAGTTTACAGCGCTGCGATCCTTGAATACTTGACCGCCGAAGTTTTGGAATTG
GCGGGAAATGCCAGTAAAGATCTTAAAGTAAAGAGAATCACACCTCGTCATTTGCAGCTT
GCAATCAGAGGAGATGAAGAATTGGATTCCTTAATCAAAGCCACAATTGCCGGCGGAGGT
GTCATTCCTCACATCCACAAGTCTCTCATAGGAAAGAAAGGACAACAAAAAGCACCTTAG
ACAATTTTGCTTCAAATTTTAAATGGAAATGATCTCATCATCTAAAGACCAACATTTTAT
TCCTTTGACCAGATTATCCAATTCTCCGAACCAGTGTGTTCAACTTTAAGCTGTGCTTAA
TAGATTAGTGTGAAATTGCTCTATCCTTTAGAGGCAGATTGTTGTGTAATTGAAAAACGG
TTGACTATTTTTTAAGCCTACCTCTGGAATTTTTTAATAAAAGTCAAAATTGTTGTAAGA
TTTTCTATCTACTGCCGATTCTTTTATTTCCTACATTATGGTTAGGCTTACTCATGTAAC
TAGACTGTACAGTTATGTATATATTACCTTTGTATTCCATTTAATAAAACATTTTCATTA
TA
| Pfam |
HMG_box_dom (IPR009071) - T[4-61] 3.7E-6 |
| Pfam |
Maelstrom (IPR024970) - T[126-210] 1.7E-19 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[450-553] 4.66E-41 |
| Gene3D |
Histone-fold (IPR009072) - T[453-579] 2.9E-53 |
| SMART |
Histone_H2A (IPR002119) - T[456-576] 1.3E-72 |
| Pfam |
Histone_H2A/H2B/H3 (IPR007125) - T[458-545] 9.7E-18 |
| CDD |
Histone_H2A (IPR002119) - T[459-573] 4.5883E-65 |
| PRINTS |
Histone_H2A (IPR002119) - T[467-489] 3.8E-41 - T[497-512] 3.8E-41 - T[512-525] 3.8E-41 - T[526-540] 3.8E-41 - T[553-571] 3.8E-41 |
| ProSitePatterns |
Histone_H2A_CS (IPR032458) - T[475-481] . |
| Pfam |
Histone_H2A_C (IPR032454) - T[546-578] 5.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| H2AV_HUMAN | 96 % | 243 | 1.32E-78 |
| H2AZ_HUMAN | 96 % | 242 | 2.7E-78 |
| H2A2C_HUMAN | 64.957 % | 142 | 2.1E-40 |