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- Transcript 'KH2012:KH.L10.17.v1....' >
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- Transcript 'Moocul.CG.ELv1_2.S55...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S55794.g03341.01.t
Possible name(s)
DDX39B
Gene model
Location
S55794 [7,979 / 9,552]
Amino acid sequence
Length: 428
>Moocul.CG.ELv1_2.S55794.g03341.01.p
MADAEAEDNELLDYEEEDQETAQEEAKTKEGQKKDVKGTYVSIHSSGFRDFLLKPELLRA
IVDCGFEHPSEVQNECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVM
CHTRELAFQISKEYERFSKYMQTIKCAVFFGGLPMTKDQATIKNNCPHIVVATPGRLLAL
VRNKSLNLTNIKHFILDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKDIRPVC
KKFMQDPMEVYVDDEAKLTLHGLRQHYVKLKDNEKNRRLFDLLDVLEFNQVVIFVKSVQR
CIALAQLLKEQNFPAIDIHRAMNQEERLQRYQLFKNFQKRILVATNLFGRGMDIERVNIV
FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSEESDAKTLNDVQDRFEVNITELPDEID
ISAYIEGR
Nucleotide sequence
Length: 1,518
>Moocul.CG.ELv1_2.S55794.g03341.01.t
TGTGCTTGTTAATTTCTAACTAAAGTATTTCCACTACCACAAAAATGGCTGATGCTGAAG
CAGAAGATAATGAATTATTAGATTACGAAGAAGAAGATCAGGAAACCGCACAAGAAGAAG
CAAAGACCAAAGAAGGACAGAAGAAAGATGTGAAGGGAACTTACGTTTCCATTCACAGTT
CTGGATTTCGAGATTTCTTATTGAAACCTGAACTTCTTCGTGCCATCGTTGATTGTGGTT
TTGAACATCCTTCGGAGGTTCAAAATGAATGTATTCCTCAAGCTGTTTTGGGAATGGATG
TTCTATGTCAAGCCAAGTCGGGTATGGGAAAAACTGCTGTCTTCGTTCTCGCCACACTCC
AACAACTTGAACCAGTTGATGGTCAAGTTTCTGTTCTTGTCATGTGCCATACTCGTGAAC
TTGCGTTTCAAATTAGCAAAGAATACGAAAGATTTTCCAAATACATGCAGACCATTAAAT
GTGCTGTGTTTTTCGGTGGTTTGCCGATGACCAAAGATCAAGCAACGATAAAGAATAACT
GCCCCCATATTGTTGTAGCCACTCCAGGACGACTCCTTGCTCTGGTGAGAAACAAATCGC
TGAATCTGACCAATATAAAGCATTTCATCTTGGACGAATGTGATAAAATGTTGGAGCAAC
TTGATATGCGGCGAGATGTTCAAGAGATCTTCCGTCTTACACCACATGAGAAGCAAGTGA
TGATGTTCAGTGCAACATTGAGCAAAGATATTCGACCTGTGTGTAAGAAATTCATGCAAG
ATCCGATGGAAGTATACGTTGATGATGAAGCCAAACTTACACTTCATGGTCTTCGACAAC
ATTACGTCAAGTTGAAGGATAATGAAAAGAATCGCAGATTGTTTGACCTCCTTGATGTGT
TGGAATTCAACCAAGTTGTTATATTTGTAAAATCGGTACAACGTTGTATTGCTCTTGCTC
AACTCCTTAAGGAACAAAATTTCCCTGCCATTGACATCCATCGAGCAATGAACCAAGAAG
AAAGATTGCAGCGTTATCAGTTGTTCAAGAACTTCCAGAAGCGGATTTTAGTTGCCACAA
ATCTGTTTGGTCGGGGCATGGATATCGAACGTGTCAATATTGTGTTCAACTACGATATGC
CTGAGGATTCCGACACATATCTCCACAGGGTAGCACGAGCAGGACGATTTGGTACCAAAG
GTTTAGCAATTACATTTGTTTCGGAAGAATCAGATGCGAAGACACTGAATGACGTTCAAG
ATCGGTTTGAAGTGAACATCACTGAACTACCTGATGAAATCGACATTTCTGCATACATTG
AAGGCCGTTAAGCTATCCACTCAGTCTCAATCATGATGTTTTTGTAGTCATTCATTTTCA
TGATTTTAACATTTTTAGTTTTTGACAAGTTTTGATATTCCTACAGCCTACTTTCTTTTT
GAAATGTACATTTTCTATTCTAGTATACACGCATGAATCATGGATCATAAATAAATTTCA
TTCTTAGATAACAAAGAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[46-74] 9.45 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[65-266] 2.8E-52 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[71-236] 2.7E-38 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[77-250] 27.051 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[115-396] 9.88E-63 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[262-423] 21.304 |
| CDD |
Helicase_C (IPR001650) - T[265-391] 3.8875E-36 |
| Pfam |
Helicase_C (IPR001650) - T[275-383] 5.7E-23 |
| SMART |
Helicase_C (IPR001650) - T[302-383] 2.5E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 35.676 % | 247 | 6.67E-78 |
| DX39B_HUMAN | 86.158 % | 755 | 0 |
| DX39A_HUMAN | 82.864 % | 734 | 0 |