- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Molecular Tool 'ZicL- MO (Yagi's 25mer MO)' >
- Region 'REG00000892' >
- Transcript 'Moocul.CG.ELv1_2.S53...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S53671.g03166.01.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
S53671 [14,253 / 15,534]
Amino acid sequence
Length: 426
>Moocul.CG.ELv1_2.S53671.g03166.01.p
MTEKESYDEAVEERIINEEYKIWKKNTPFLYDLVMTHALEWPSLTSQWLPDVQKPEGKDY
TVHRLILGTHTSDEQNHLIIASVQLPTDEAQFDASHYDSERGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIGTKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLKGHQKEGY
GLSWNPNLTGHLLSASDDHTICLWDISSATKEKRVLEAKSIYRGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNSNCKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDADD
GPPELLFVHGGHTAKISDFSWNPNEPWVVCSVSEDNIMQVWQMAENIYNDDEQEAGADLE
QQKMES
Nucleotide sequence
Length: 1,281
>Moocul.CG.ELv1_2.S53671.g03166.01.t
ATGACTGAAAAAGAAAGTTACGACGAGGCAGTGGAAGAGAGAATTATCAACGAAGAATAC
AAAATATGGAAAAAGAACACTCCATTCTTGTACGATTTGGTGATGACACATGCATTGGAA
TGGCCTAGTTTAACATCACAGTGGCTCCCAGATGTCCAGAAACCGGAAGGTAAAGATTAT
ACTGTTCATCGACTTATATTAGGAACGCACACTTCGGATGAACAAAACCATTTAATAATC
GCAAGCGTGCAACTTCCAACTGACGAAGCACAATTCGATGCTTCTCACTATGACAGTGAA
CGAGGCGAATTCGGAGGTTTTGGTTCGGTTAGCGGTAAAATTGAAATAGAAATAAAGATA
AATCATGAGGGGGAAGTTAACAGAGCACGATACATGCCACAAAATCCGTGTATAATCGGG
ACGAAAACGCCTTCAAGCGATGTGCTTGTTTTTGATTACACAAAACATCCAAGTAAACCA
GATCCAAGTGGGGAGTGCAACCCTGATCTCAGATTAAAAGGTCACCAAAAGGAAGGTTAT
GGCCTTTCCTGGAACCCAAACCTTACTGGCCATTTGCTAAGTGCCTCTGATGACCATACA
ATTTGTTTGTGGGATATAAGTAGTGCCACGAAAGAAAAGCGAGTCTTGGAAGCAAAGTCG
ATTTATCGTGGACACACTGCCGTAGTGGAAGATGTATCGTGGCATTTACTGCATGAGAGT
TTGTTTGGATCGGTCGCAGATGATCAAAAATTAATGATTTGGGACACACGAAGTAATAGT
AATTGCAAACCAAGTCACACAGTTGATGCACATACTGCTGAAGTAAACTGTTTGTCATTT
AACCCTTACAGTGAGTTTATCTTGGCTACAGGGTCAGCTGACAAAACTGTTGCATTGTGG
GATTTGCGAAACTTGAAATTAAAATTGCATTCATTTGAATCTCATAAAGATGAAATTTTC
CAAGTTCAATGGTCACCACATAACGAGACCATACTTGCGTCAAGCGGCACTGATAGAAGA
CTTAATGTTTGGGATCTGAGTAAAATTGGTGAAGAACAATCAGCTGAAGATGCAGATGAT
GGTCCTCCGGAACTTCTGTTTGTCCATGGAGGTCATACAGCGAAGATATCTGACTTTTCA
TGGAATCCAAATGAACCTTGGGTTGTGTGTTCCGTGTCTGAAGATAACATCATGCAAGTG
TGGCAAATGGCAGAGAATATCTATAATGACGATGAACAGGAGGCTGGTGCTGACTTGGAA
CAACAGAAGATGGAGAGTTGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-424] 4.8E-168 |
| Pfam |
Histone-bd_RBBP4_N (IPR022052) - T[18-86] 1.2E-27 |
| SMART |
WD40_repeat (IPR001680) - T[111-152] 70.0 - T[165-205] 5.1E-6 - T[215-255] 0.035 - T[261-301] 1.5E-9 - T[305-345] 7.0E-7 - T[362-402] 1.9E-4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[113-407] 1.08E-52 |
| Pfam |
WD40_repeat (IPR001680) - T[172-205] 0.035 - T[220-255] 0.11 - T[263-301] 1.7E-7 - T[309-345] 3.4E-4 - T[366-401] 0.0014 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[172-411] 36.226 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[172-214] 12.681 - T[222-264] 9.138 - T[268-304] 13.85 - T[312-354] 12.948 - T[369-403] 9.138 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[192-206] 1.4E-8 - T[288-302] 1.4E-8 - T[332-346] 1.4E-8 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[192-206] . - T[288-302] . - T[332-346] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 28.758 % | 122 | 1.65E-30 |
| RBBP7_HUMAN | 83.924 % | 763 | 0 |
| RBBP4_HUMAN | 88.889 % | 801 | 0 |